Sequence of DPV Indian cassava mosaic virus
Indian cassava mosaic virus recombinant defective DNA B, clone D1B (ICMV-[Ker3]B)
ACC No: AM238428
Dated: 2007-02-27 | Length: 1555 | CRC: 1084923637
ID AM238428; SV 1; circular; other DNA; STD; VRL; 1555 BP.
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AC AM238428;
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DT 31-MAR-2006 (Rel. 87, Created)
DT 27-FEB-2007 (Rel. 90, Last updated, Version 2)
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DE Indian cassava mosaic virus recombinant defective DNA B, clone D1B
DE (ICMV-[Ker3]B)
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KW recombinant defective DNA.
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OS Indian cassava mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-1555
RA Patil B.L.;
RT ;
RL Submitted (23-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL Patil B.L., Plant Molecular Biology, University of Delhi South campus,
RL Dept. of Plant Molecular Biology, University of Delhi, New Delhi-21,
RL 110021, INDIA.
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RN [2]
RA Patil B.L., Briddon R.W., Rothenstein D., Dasgupta I., Stanley J.,
RA Jeske H.;
RT "Deletion events between DNA-A and DNA-B generate defective molecules in
RT Indian cassava-infecting Geminiviruses. (communicated to Journal of General
RT Virology)";
RL Unpublished.
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RN [3]
RA Patil B.L., Dutt N., Briddon R.W., Bull S.E., Rothenstein D., Borah B.K.,
RA Dasgupta I., Stanley J., Jeske H.;
RT "Deletion and recombination events between the DNA-A and DNA-B components
RT of Indian cassava-infecting geminiviruses generate defective molecules in
RT Nicotiana benthamiana";
RL Virus Res. 124(1-2):59-67(2007).
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FH Key Location/Qualifiers
FH
FT source 1. .1555
FT /organism="Indian cassava mosaic virus"
FT /specific_host="Cassava"
FT /lab_host="Nicotiana benthamiana"
FT /mol_type="other DNA"
FT /country="India:Kerala"
FT /clone="D1B"
FT /virion
FT /note="recombinant DNA from ICMV-[Ker3]B"
FT /db_xref="taxon:31600"
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SQ Sequence 1555 BP; 418 A; 308 C; 359 G; 470 T; 0 other;
am238428 Length: 1555 27-FEB-2007 Type: N Check: 1892 ..
1 accggatggc cgcgccccct ctttatggtg gcccccccca cgttgggatg
51 tccccctctc acaacgcgca ctaggaggtt caacatgttg gtggccccac
101 gatgttgttt ataacgtcta taactgagac tcgaagcatg tgctgccacg
151 tatgcgttat ttgtacttcg tctcgaagtt atgagtgagg gccctatgtg
201 tggatatcta acggcccatg gtgcatttga tcctattgaa catggagcat
251 atctcatgga tctggatcct attagacttg ggccctggac cagtttcctc
301 tgctgggctt tccgacccac tgaccagaaa tcaatgtctt tctcagtgaa
351 ggccttgctc agtatctcga ttttgggaga tcggaactgt atgtcagtag
401 actgctttgc agttgacagc ttgagttttc cctgtatacg gcagaagtgg
451 accccgttga tgacgtttgt gtctacgact ctgtacataa ccctccatgg
501 gtttatgtcc ttcatggaga agaacgatga agaatagtag tgaaggttgc
551 agttgcattg gacgggaata gtaaattcag cctgttttga gtctccgtca
601 tgcagtcttt ggtcgtgaat ttcaatgatg acatgccctg tggcgttaat
651 gggtacctgg tttctatact ctaggacgat gtggtctatt ttgcagcagt
701 gacccttgag gagcgatatt ttgttatcca gaagagatgg aaagctcaac
751 ttgacgtctg ttgagtcatt ggttaactca tattcaactc tttcggaacg
801 aagatacgct gcattgctac tattattctc cattggcccc gcaggggaaa
851 tgcttaataa taagcccagc gcagaagaaa taatttaatg tgcataaaac
901 aaagcccaaa gcgtaataaa tagctaaagg catatatatt atattattga
951 tgaaaggtta caagagcatc cacgtggcag tggattaaat acatgaaaag
1001 ctatacaata tatttaaaaa aagttgtgac gacgtcatct tcaacgaatg
1051 gaaccggaaa ccctaatcca tctctgagga cgctggttaa gccctctagt
1101 agtatgttac atgtttccgg tgtcatgtgg tagtaattgt tgagtttgta
1151 accccaatct tccattttga aggccatatg tatggctcta tctatttctg
1201 gtaacagatc catatcttgt tcttcgaatt ggaggtaata ggaatttgaa
1251 ccagtcgcga tgtaagattg atgtctgcta gtagttttga attcgaccca
1301 gatcgaattc ttcataatgc gactggatag tcgcacatat ttcttgctgt
1351 gttgcaagaa ggaatagtta gtttgggaag acataggaag aatgagaatg
1401 atgttgggtt taaatgggat ttctctctcc gcaatcggta ctcagatagt
1451 ttagccccca tattaggtac tcaatatata catgagtacc aaatggcata
1501 gatgtaaata atgggaatat aatttgaatt caaaagcggc catccgtata
1551 atatt