Sequence of DPV Sri Lankan cassava mosaic virus
Sri Lankan cassava mosaic virus recombinant defective DNA B, clone D15B (SLCMV-[Ker4]B)
ACC No: AM238431
Dated: 2007-02-27 | Length: 1414 | CRC: -50384650
ID AM238431; SV 1; circular; other DNA; STD; VRL; 1414 BP.
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AC AM238431;
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DT 31-MAR-2006 (Rel. 87, Created)
DT 27-FEB-2007 (Rel. 90, Last updated, Version 2)
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DE Sri Lankan cassava mosaic virus recombinant defective DNA B, clone D15B
DE (SLCMV-[Ker4]B)
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KW recombinant defective DNA.
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OS Sri Lankan cassava mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-1414
RA Patil B.L.;
RT ;
RL Submitted (23-MAR-2006) to the EMBL/GenBank/DDBJ databases.
RL Patil B.L., Plant Molecular Biology, University of Delhi South campus,
RL Dept. of Plant Molecular Biology, University of Delhi, New Delhi-21,
RL 110021, INDIA.
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RN [2]
RA Patil B.L., Briddon R.W., Rothenstein D., Dasgupta I., Stanley J.,
RA Jeske H.;
RT "Deletion events between DNA-A and DNA-B generate defective molecules in
RT Indian cassava-infecting Geminiviruses. (communicated to Journal of General
RT Virology)";
RL Unpublished.
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RN [3]
RA Patil B.L., Dutt N., Briddon R.W., Bull S.E., Rothenstein D., Borah B.K.,
RA Dasgupta I., Stanley J., Jeske H.;
RT "Deletion and recombination events between the DNA-A and DNA-B components
RT of Indian cassava-infecting geminiviruses generate defective molecules in
RT Nicotiana benthamiana";
RL Virus Res. 124(1-2):59-67(2007).
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FH Key Location/Qualifiers
FH
FT source 1. .1414
FT /organism="Sri Lankan cassava mosaic virus"
FT /specific_host="Cassava"
FT /lab_host="Nicotiana benthamiana"
FT /mol_type="other DNA"
FT /country="Sri Lanka:Colombo"
FT /clone="D15B"
FT /virion
FT /note="recombinant DNA from SLCMV-[Ker4]B"
FT /db_xref="taxon:161378"
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SQ Sequence 1414 BP; 371 A; 283 C; 329 G; 431 T; 0 other;
am238431 Length: 1414 27-FEB-2007 Type: N Check: 8606 ..
1 accggatggc cgcgcccccc tctttatggt ggcccccccc acgttgggat
51 gtccccctct cacaacgctc actagaaggc tcaacatgtt ggtggcccca
101 cgatgtcgtt tataacgtct ataactgaga ctcgaagcat gtggtgccac
151 gtatgcgtta tttgtacttc gtctcgaagt tatgagtgag ggccctgtat
201 gtgggatcct attagacttg ggccttggac cagtttcctc tgctggggtt
251 tccgacccac tgaccagaaa tcaatgtccc tctagtgaag gccttgctca
301 gtatctcgat tttgggagat cggaactgta tgtcattaga ctgctttgca
351 gttgacagct tgagttttcc ctgtatacgg cagaagtgga ccccgttgat
401 gacgtttgtg tctacgaccc tgtacataac cctccatggg tttatgtctt
451 tcatggagaa gaacgatgaa gaatagtagt gaaggttgca gttgttggac
501 gggaatagta aattctgcct gttttgagtc tccgtcatgc agtctttggt
551 cgtgaatttc aatgatgaca tgccctgtgg cgttaatggg tacctggttt
601 ctatactcta ggacgatgtg gtctattttg cagcagtgac ccttgaggag
651 cgatattttg ttatccagaa gagatggaaa actcaacttg acgtcggttg
701 agtcatggtt aactcatatt caactctttc ggaacgaaga tacgctgcat
751 tgctactatt attctccatt ggccccgcag gggaaatgct taaaaattaa
801 gcccagtgca aagaaataat ttaatgtgca taaagcaaag cccagagctt
851 aataaatagc gaaaggcata tatattatat tattgatgaa aggttacaag
901 agcatccacg tggcgtggat taaatacatg aaaagctata caatatattt
951 tttccggtgt catgtggtag taatttttga gtttgtaacc cccaatcttc
1001 cattttgaag gccatatgta tggctctatc tatttctggt aacagatcca
1051 tatcttgttc ttcgaaatgg aggtaatatg aatttgaacc agtcgcgatg
1101 taaggttgat gtctgctagt agttttgaat tcgacccaga tcgaattctt
1151 cataatgcga ctggatagtc gcacacattt cttgctgtgt tgcaagaagg
1201 aataggtagt ttgggaagac ataggaagaa tgagaatgat gttgggttta
1251 agtgggattt ctctctcctc aattggagac acccctgagc aagtctctag
1301 tgaattggag acaatatata tgtgtctcca aatggcattc tcgtaattct
1351 caaaagttac agtcaaattt caaatccgaa tttgagatcc aaaagcggcc
1401 atccgtataa tatt