Sequence of DPV Cucumber mosaic virus

Cucumber mosaic virus MP gene for movement protein, specific host Tagetes erecta

ACC No: AM396982

Dated: 2006-09-25 | Length: 840 | CRC: 1179093112

                
ID   AM396982; SV 1; linear; genomic RNA; STD; VRL; 840 BP.
XX
AC   AM396982;
XX
DT   25-SEP-2006 (Rel. 89, Created)
DT   25-SEP-2006 (Rel. 89, Last updated, Version 1)
XX
DE   Cucumber mosaic virus MP gene for movement protein, specific host Tagetes
DE   erecta
XX
KW   movement protein; MP gene.
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Cucumovirus.
XX
RN   [1]
RP   1-840
RA   Gupta R.;
RT   ;
RL   Submitted (21-AUG-2006) to the EMBL/GenBank/DDBJ databases.
RL   Gupta R., Floriculture Division, Institute of Himalayan Bioresource Tech.,
RL   P.O. Box#6, IHBT, Palampur, Distt. Kangra, Himachal Pradesh, 176 061,
RL   INDIA.
XX
RN   [2]
RA   Gupta R., Hallan V., Verma R.R., Singh L., Zaidi A.A.;
RT   "Variability studies of Cucumber mosaic virus infecting various ornamental
RT   plants in India";
RL   Unpublished.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .840
FT                   /organism="Cucumber mosaic virus"
FT                   /specific_host="Tagetes erecta"
FT                   /lab_host="Cucumis sativus"
FT                   /isolate="Indian"
FT                   /mol_type="genomic RNA"
FT                   /country="India:Palampur"
FT                   /collected_by="Raksha Gupta"
FT                   /virion
FT                   /db_xref="taxon:12305"
FT   CDS             1. .840
FT                   /gene="MP"
FT                   /product="movement protein"
FT                   /function="viral movement"
FT                   /protein_id="CAL48247.1"
FT                   /translation="MAFQGTSRTLTQQSSAASSDDLQKILFSPDAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPQVTSNNLLSFFKSGYDAGELRSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLIIYLADLGDKELSPIDGQCVTLHNHELPALISFQPTYDCPMELVGNRHRCFAVVVE
FT                   RHGYIGYGGTTASVCSNWQAQFSSKNNNYTHAAAGKTLVLPYNRLAEHSKPSAVARPLK
FT                   SQLNNVSSSRYLLPNVALNQNASGHESEILSESPPIAIGSPSASRNNSFRPQVVNGL"
XX
SQ   Sequence 840 BP; 201 A; 199 C; 198 G; 242 T; 0 other;

am396982 Length: 840  25-SEP-2006  Type: N  Check: 6659  ..

       1  atggctttcc aaggtaccag taggacgtta actcaacagt cctcggcggc
      51  gtcgtctgac gacttacaga agatattatt cagccccgat gccatcaaga
     101  agatggctac tgagtgtgac ctaggtcgac atcattggat gcgcgcggat
     151  aacgccatct ctgtcagacc tctcgttccc caagtaacca gtaacaattt
     201  attgtctttc tttaaatctg ggtatgatgc cggtgaattg cgctctaaag
     251  gctatatgag cgttcctcaa gtactgtgtg ccgttaccag gacggtttct
     301  acggatgctg agggttcttt gattatttat ttggctgacc taggtgataa
     351  agaattatcc ccaattgatg ggcagtgtgt tactttacat aatcatgagc
     401  tccctgcttt gatatctttc caacctacct acgattgccc catggaatta
     451  gttggcaatc ggcatcgatg tttcgcggta gtcgttgaga gacatggtta
     501  tattggttac ggtggtacca ctgctagcgt gtgtagtaac tggcaagctc
     551  agttttcttc aaagaataat aattatacac acgccgctgc tggtaagact
     601  cttgtgttgc cttacaacag attagctgag cattcgaaac cgtcagccgt
     651  cgctcgcccg ttgaagtcgc agttaaacaa cgttagctca tcgcgctatc
     701  ttttgccgaa cgttgctctt aatcaaaatg cgtctgggca cgagtccgag
     751  attttaagcg aaagccctcc catcgctata gggagtccgt ccgcgtcccg
     801  taacaatagc ttcagaccgc aggtggttaa cggtctttag