Sequence of DPV Rice stripe virus

Rice Stripe Virus partial segment 2 (ns2 gene), genomic RNA, isolate JS-YM

ACC No: AM397832

Dated: 2008-04-01 | Length: 600 | CRC: -1365801270

                
ID   AM397832; SV 1; linear; genomic RNA; STD; VRL; 600 BP.
XX
AC   AM397832;
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DT   01-SEP-2006 (Rel. 89, Created)
DT   01-APR-2008 (Rel. 95, Last updated, Version 2)
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DE   Rice Stripe Virus partial segment 2 (ns2 gene), genomic RNA, isolate JS-YM
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KW   ns2 gene; NS2 protein.
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OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN   [1]
RP   1-600
RA   Zhou X.P.;
RT   ;
RL   Submitted (31-AUG-2006) to the EMBL/GenBank/DDBJ databases.
RL   Zhou X.P., Zhejiang University, Institute of Biotechnology, No. 268.
RL   Kaixuan Road, Hangzhou, Zhejiang, 310029, CHINA.
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RN   [2]
RA   Xiong R., Cheng Z.B., Wu J.X., Zhou Y.J., Zhou T., Zhou X.P.;
RT   "First report of an outbreak of Rice stripe virus on wheat in China";
RL   Plant Pathol. 57:397-397(2008).
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FH   Key             Location/Qualifiers
FH
FT   source          1. .600
FT                   /organism="Rice stripe virus"
FT                   /segment="2"
FT                   /mol_type="genomic RNA"
FT                   /country="China:Jiangsu Province"
FT                   /lat_lon="33.62 N 119.02 E"
FT                   /isolation_source="wheat"
FT                   /collected_by="Xue-ping Zhou"
FT                   /collection_date="31-Aug-2006"
FT                   /db_xref="taxon:12331"
FT   CDS             1. .600
FT                   /gene="ns2"
FT                   /product="NS2 protein"
FT                   /db_xref="InterPro:IPR009965"
FT                   /db_xref="UniProtKB/TrEMBL:Q7T3Z3"
FT                   /protein_id="CAL37116.1"
FT                   /translation="MALLLFNDHYYGFLHKYKRHTGSYDNLFNLRCSKEDHYLNSLDAI
FT                   WLMGCCEEFTDPALRAHALAIATESNIGLVNNNAVISDERLKCWLCKKPSHQQTEHLKL
FT                   ILLPNLVNGFQFATESYHICLKDHSGDDPTQYLSEFSFPTGLRAYYKPHQKMEHKHIVV
FT                   TNGIPISKNFNEIALPDPSPSEDYVLVGAHECPILM"
XX
SQ   Sequence 600 BP; 181 A; 137 C; 110 G; 172 T; 0 other;

am397832 Length: 600  01-APR-2008  Type: N  Check: 2596  ..

       1  atggcattac tccttttcaa tgatcactac tatggttttc tccataaata
      51  taaaagacat actggatcat atgataatct cttcaatttg aggtgctcta
     101  aagaagacca ctatttgaac tctcttgatg ccatctggct catgggatgc
     151  tgtgaggagt tcacagatcc agctcttaga gcacatgctc tcgccatagc
     201  aactgaatct aacataggtt tggttaacaa taatgccgtg atatctgatg
     251  aaaggctgaa atgctggctc tgtaaaaaac catctcatca acagactgag
     301  catctgaaac tgatcctgtt acccaacctg gtcaacggtt ttcagtttgc
     351  tacagagtca tatcacatat gcctgaagga tcactctgga gatgacccta
     401  cacaatatct tagtgagttc tcctttccca caggattacg agcctactac
     451  aagccacatc agaagatgga gcataaacat atagttgtaa ccaatggaat
     501  acccatctca aagaatttca acgaaattgc tctccctgac ccatctccta
     551  gtgaagacta tgtcttggtt ggagcacatg agtgtcctat tctaatgtga