Sequence of DPV Tomato leaf curl Seychelles virus
Tomato leaf curl Seychelles virus complete genome
ACC No: AM491778
Dated: 2007-02-10 | Length: 2742 | CRC: 1207762773
ID AM491778; SV 1; circular; genomic DNA; STD; VRL; 2742 BP.
XX
AC AM491778;
XX
DT 10-FEB-2007 (Rel. 90, Created)
DT 10-FEB-2007 (Rel. 90, Last updated, Version 1)
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DE Tomato leaf curl Seychelles virus complete genome
XX
KW C1 gene; coat protein; complete genome; movement protein;
KW replication associated protein; V1 gene; V2 gene.
XX
OS Tomato leaf curl Seychelles virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2742
RA Lefeuvre P.;
RT ;
RL Submitted (07-FEB-2007) to the EMBL/GenBank/DDBJ databases.
RL Lefeuvre P., AMIS, CIRAD - UMR PVBMT, 7 chemin de l'IRAT, Ligne Paradis,
RL Saint Pierre, 97410, REUNION.
XX
RN [2]
RA Lefeuvre P., Delatte H., Naze F., Dogley W., Reynaud B., Lett J.M.;
RT "A new tomato leaf curl virus from the Seychelles archipelago";
RL Plant Pathol. 0:0-0(0).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2742
FT /organism="Tomato leaf curl Seychelles virus"
FT /specific_host="Solanum lycopersicum"
FT /mol_type="genomic DNA"
FT /country="Seychelles:Mahe"
FT /collection_date="2004"
FT /virion
FT /db_xref="taxon:425303"
FT CDS 141. .491
FT /gene="V2"
FT /product="movement protein"
FT /protein_id="CAM33397.1"
FT /translation="MWDPLVNEFPDSVHGFRCMLAIKYLQAVEETYEPNTLGYDLIRDL
FT ICVIRARDYVEATRRYNNFHTRLEGSSKAELRQPLYQPCCCPHCPRHKQTSIMDVQAHV
FT SKAQDVSNVQKS"
FT CDS 301. .1077
FT /gene="V1"
FT /product="coat protein"
FT /protein_id="CAM33398.1"
FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTSRVAAPIAQGTSRRRSW
FT TYRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGSGITH
FT RVGKRFCIKSIYILGKIWMDDNIKKQNHTNQVMFFLVRDRRPYGSAPMDFGQVFNMFDN
FT EPSTATVKNDLRDRYQVMRKFHSTVVGGPSGSKEQALVKRFFRINSHVTYNHQEAAKYE
FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN"
FT CDS complement(1534. .2661)
FT /gene="C1"
FT /product="replication associated protein"
FT /protein_id="CAM33399.1"
FT /translation="MRHQRHQFRRVLKDTNMPRQPGFRVSAKNIFLTYPKCSLSKEIAL
FT ELLKAIKCPSDKLFIRVSQEKHQDGSLHLHALIQFKGKAQFKNPRHFDLQHPTSSSQFH
FT PNFQGAKSSSDVKSYIEKDGDYIDWGTFQVDGRSARGGQQTANDAAADALNAGSKDAAL
FT QIIREKLPEKFIFQYHNLVSNLDRIFQEPPAPYISPFLCSSFNQVPEELEVWAAENVMG
FT AAARPWRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDP
FT HYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNTPLK
FT DWAFKNATFITLHEPLFTSTNQGPTPHSENESSQT"
XX
SQ Sequence 2742 BP; 705 A; 545 C; 658 G; 834 T; 0 other;
am491778 Length: 2742 10-FEB-2007 Type: N Check: 4706 ..
1 accggatggc cgcgccccca aaaaagaaag tgggccccgc gcactagttt
51 gtgtcggcca atgagagagg tccgtcatag cttagttatt tcattttggt
101 ctttaaattg cgtggtcccc aagcttcagt cgttgtcagt atgtgggacc
151 cacttgtaaa cgagttccca gactctgttc atggttttcg ttgtatgctt
201 gctattaaat atttgcaggc cgtggaagaa acttacgagc ccaatacatt
251 gggctacgat ttaattcgtg atcttatttg tgttattagg gcccgtgatt
301 atgtcgaagc gacccggaga tataataatt tccacacccg tctcgaaggt
351 tcgtcgaagg ctgaacttcg acagccctta taccagccgt gttgctgccc
401 ccattgccca aggcacaagc agacgtcgat catggacgta caggcccatg
451 tatcgaaagc ccaggatgta tcgaatgtac aaaagtcctg atgttcctcg
501 tggttgtgaa gggccatgta aggtccagtc gtatgagcag agggatgatg
551 tcaagcacac cggtattgtt cgttgtgtta gtgatgttac gcgtggttcg
601 ggtattaccc atagagttgg caagaggttt tgtattaagt cgatatatat
651 cttaggtaag atctggatgg atgacaatat caagaagcag aatcatacta
701 atcaggttat gtttttcctt gttcgtgata gaaggcccta cggctcggct
751 ccaatggatt ttggacaggt gtttaatatg tttgataatg agcccagtac
801 agctacggtg aagaatgatt tgagggacag atatcaggtc atgaggaaat
851 ttcattcaac tgtagttggt ggaccctctg gatcgaagga gcaggcatta
901 gttaagaggt tttttaggat taatagccat gtaacttata atcatcagga
951 ggcagctaag tatgagaacc atactgagaa tgccttatta ttgtatatgg
1001 catgtactca tgcgtctaat ccagtgtatg ctactcttaa gatacggatc
1051 tatttctatg attcggtcag taattaatag atattaaatt ttattgcatg
1101 attctccgta acttggaggg tatttacaag tacatcgtgt aatacataat
1151 caactgctct aattattgca ttaattgaaa ttacacctaa ggaatctaaa
1201 tacttgagaa cttgggtctt aaatacggtt aagaaacgac cagtctgagg
1251 gcgtaagctc gtccagacct tgaagttgag aaaacatttg tgaatcccca
1301 acgccttcct caggttgtgg ttgaacctta tttggaatga tatgatgtct
1351 tggttcgtgt tgaatggccg gctgtcgtgg tcgatgatct tgaaatagag
1401 gggatttttt atctcccaga taaacacgcc actctgtgct tgagctgcag
1451 tgatgagttc cccggtgcgt aatccatggc tgctacaatt gatatgtata
1501 taatatgagc agccgcagtc taggtctatg cgcttacgtc tgactgctct
1551 cgttttcgct atgcggtgtt ggaccttgat tggtacttgt gaagagtggc
1601 tcgtggaggg tgatgaaggt ggcattcttg aaggcccagt cttttagtgg
1651 tgtattcttt tcctcgtcta gatactcttt atacgaggat gttggtcctg
1701 gattgcagag gaagatagtg ggaattccgc ctttaatttg aatgggcttc
1751 ccgtacttgg tgttgctttg ccagtccctc tgggccccca tgaactcctt
1801 aaagtgcttc aggtagtgcg gatcaacgtc atcaatgacg ttataccatg
1851 catcattgga gtacactttt ggactcaggt ccagatgccc gcataggtaa
1901 ttgtggggtc ctaatgacct ggcccacatt gtcttgcctg tacgactatc
1951 accctctatc acaatactaa tcggtctcca aggccgcgca gcggcaccca
2001 tcacgttttc agccgcccag acttcaagtt cttccggaac ttgattgaaa
2051 gaagaacaaa gaaaaggaga aatataagga gccggaggct cctgaaaaat
2101 cctatctaaa ttactaacta aattatgata ctgaaaaata aatttttcag
2151 ggagtttctc ccttatgatt tgcaaagcag cgtctttact acctgcattt
2201 aaggcatccg ctgccgcatc attagctgtc tgctgacctc ctctagcaga
2251 tcttccgtcg acctgaaaag taccccagtc gatgtaatca ccgtccttct
2301 cgatgtagga cttgacatct gatgaggatt tagctccctg gaaatttgga
2351 tggaattggg aggagctggt ggggtgttga aggtcgaaat gtctggggtt
2401 tttaaattgg gctttaccct tgaactggat gagagcatgg aggtgcagag
2451 acccatcctg gtgtttttcc tggctaactc tgataaataa tttatcagat
2501 gggcatttta ttgcctttaa tagctcaaga gctatttctt tagaaagaga
2551 gcatttggga tatgtaagga agatattttt agctgacact ctaaaacctg
2601 gttgacgagg catattggtg tctttcaaaa ctctacggaa ttggtgtctt
2651 tggtgtctca tttatagctg ggacaccaat ggcattttgg taaatttagc
2701 acctttaatt tgaatttcaa aagcggccat ccgtataata tt