Sequence of DPV Pepper yellow vein Mali virus
Pepper yellow vein Mali virus DNA-A, complete genome, isolate F26
ACC No: AM691555
Dated: 2007-04-14 | Length: 2786 | CRC: 1134877155
ID AM691555; SV 1; circular; genomic DNA; STD; VRL; 2786 BP.
XX
AC AM691555;
XX
DT 14-APR-2007 (Rel. 91, Created)
DT 14-APR-2007 (Rel. 91, Last updated, Version 1)
XX
DE Pepper yellow vein Mali virus DNA-A, complete genome, isolate F26
XX
KW ac1 gene; AC1 protein; ac2 gene; AC2 protein; ac3 gene; AC3 protein;
KW ac4 gene; AC4 protein; av1 gene; av2 gene; AV2 protein; CP protein.
XX
OS Pepper yellow vein Mali virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2786
RA Jia S.;
RT ;
RL Submitted (12-APR-2007) to the EMBL/GenBank/DDBJ databases.
RL Jia S., Fujian Agriculture & Forestry University, Institute of Plant Virus,
RL FAFU, Jinshan, Fuzhou, Fujian 350002, CHINA.
XX
RN [2]
RA Jia S., Wu Z.;
RT "Characterization of weeds-infecting begomoviruses (genus begomovirus,
RT family geminiviridae) from Fujian, China";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2786
FT /organism="Pepper yellow vein Mali virus"
FT /specific_host="Eclipta prostrata"
FT /isolate="F26"
FT /mol_type="genomic DNA"
FT /country="China:Fuzhou,Fujian"
FT /lat_lon="26.00 N 119.00 E"
FT /collected_by="Suping Jia"
FT /collection_date="10-Oct-2006"
FT /virion
FT /db_xref="taxon:260378"
FT CDS 139. .489
FT /gene="av2"
FT /product="AV2 protein"
FT /protein_id="CAM84557.1"
FT /translation="MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDL
FT ISVIRARDYVEATRRYNHFHARLEGSSKAELRQPIHQPCCCLHCPRHKQASIMDLPAHV
FT SKTQDVQNVQKP"
FT CDS 299. .1075
FT /gene="av1"
FT /product="CP protein"
FT /protein_id="CAM84558.1"
FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPYTSRAAVSIAQGINRRRSW
FT TYRPMYRKPRMYRMFRSPDVPRGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTRGPGITH
FT RVGKRFCIKSIYILGKIWMDENIKKQNHTNQVMFFLVRDRRPYGTSPQDFGQVFNMFDN
FT EPSTATVKNDLRDRYQVLRKFHATVVGGPSGMKEQALVKRFFRVNTHVVYNHQEAAKYE
FT NHTENALLLYMACTHASNPVYATLKIRIYLYDAVTN"
FT CDS complement(1072. .1476)
FT /gene="ac3"
FT /product="AC3 protein"
FT /protein_id="CAM84559.1"
FT /translation="MDSRTGEYITAAQAENGVYTWELTNPLYFKIIKHDSRPYLREHDI
FT ITVQIQFNYNLRKALGIHKCFLTCQIWTRLQPQTLSFLRVFKTQVMKYLDNLGVICLNN
FT VIRAINHVLWNALHHTLYVNFNHIIKFNIY"
FT CDS complement(1217. .1624)
FT /gene="ac2"
FT /product="AC2 protein"
FT /protein_id="CAM84560.1"
FT /translation="MQPSSPSTGHSTQVPIKVIHRRAKTKAIRRKRIDLDCGCSYYLHI
FT DCINHGFTHRGVHHCSSGREWRVYLGTNQSPVFQDHQTRQQTIPTGTRHHYSSDTVQLQ
FT PAEGFGDTQMFSDLPDLDSLTTSDIEFLKGL"
FT CDS complement(1548. .2612)
FT /gene="ac1"
FT /product="AC1 protein"
FT /protein_id="CAM84561.1"
FT /translation="MAPPKRFKINSKNYFLTFPKCSLTKEEALEQLLNLSTPTNKKFIK
FT VCRELHTNGEPHLHVLMQFEGKYQCTNNRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYI
FT DKDGDTLEWGVFQVDGRSARGGCRNANDAAAEALNADSAEAAMAIIREKLPKEFIFQYH
FT NLKTNLDRIFQEPPAPYVSPFLSSSFTQVPEELEECVSENVMGAAARPWRPNSIVVEGD
FT SRTGKTVWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHWKEFFGAQRDW
FT QSNTKYGKPIQIKGGIPSIFLCNPGPTSSYKEFLEEAKNYALKSWTLKNATFVTLDRPL
FT YSSTNQGHPPQSQD"
FT CDS complement(2198. .2455)
FT /gene="ac4"
FT /product="AC4 protein"
FT /protein_id="CAM84562.1"
FT /translation="MGNLISTCLCSSRGNTSARITDSSTWYPQPGQHISIRTFRELNQA
FT PTSSPTSTRTETPLNGGYSRSTAEVLGEAVEMLTTLQQRP"
XX
SQ Sequence 2786 BP; 711 A; 574 C; 661 G; 840 T; 0 other;
am691555 Length: 2786 14-APR-2007 Type: N Check: 4441 ..
1 accggatggc cgcgcccccg aaaaagatat gggccccacg cactaatatg
51 tgtcgaccaa tcatatcgca gcctgaaagg ctagatattt gtgttttgtc
101 tttatatact tgggcaccaa gtttgggcct tgtccataat gtgggatcca
151 cttttgaacg agtttcccga gtccgttcac ggatttcgtt gtatgctcgc
201 cattaaatat ttgcaggccg tggaggaaac ttacgagccc aatactttgg
251 gccacgattt aattagggat cttattagtg ttattagggc tcgagactat
301 gtcgaagcga cccggcgata taatcatttc cacgcccgtc tcgaaggttc
351 gtcgaaggct gaacttcgac agcccataca ccagccgtgc tgctgtctcc
401 attgcccaag gcataaacag gcgtcgatca tggacctacc ggcccatgta
451 tcgaaaaccc aggatgtaca gaatgttcag aagccctgat gtccctcgtg
501 gttgtgaggg tccgtgtaag gttcagtcgt acgaacagag ggatgatgtt
551 aagcacactg gtattgttcg ctgcgttagt gatgtcacac gtggcccggg
601 cattactcat cgtgtaggaa agagattttg tattaagtct atatatattc
651 tgggtaagat ctggatggat gaaaatatca agaagcagaa tcacaccaac
701 caggttatgt tttttttagt tcgtgataga aggccctatg gaaccagccc
751 acaggatttt gggcaggttt ttaacatgtt cgataatgag cccagtactg
801 ctacggtgaa gaatgatttg cgtgatcgtt atcaagtcct caggaaattc
851 catgctacgg tagttggtgg accctctggg atgaaagagc aggctttagt
901 caagaggttt tttagggtta acacgcacgt cgtgtacaat catcaggaag
951 cagctaaata tgagaatcat actgagaatg ctttgttgct gtatatggca
1001 tgtactcatg cctctaaccc tgtgtatgct acgcttaaga tacgcatcta
1051 tttatatgat gccgttacga attaataaat attgaatttt attatatgat
1101 tgaagtttac atacaacgta tggtgcaatg cattccatag tacatgattt
1151 attgctctaa ttacattgtt aagacaaatt acaccaagat tatctaaata
1201 cttcataacc tgggtcttaa agacccttaa gaaactcaat gtctgaggtt
1251 gtaagcgagt ccagatctgg caagtcagaa aacatttgtg tatccccaaa
1301 gccttccgca ggttgtagtt gaactgtatc tgaactgtaa tgatgtcgtg
1351 ttcccgtagg tatggtctgc tgtcgtgttt gatgatcttg aaatacaggg
1401 gattggttag ttcccaggta tacacgccat tctctgcctg agctgcagtg
1451 atgtactccc ctgtgcgtga atccatggtt gatgcagtcg atgtggaggt
1501 agtatgaaca gccgcagtcg aggtctattc gcttacggcg gatggcttta
1551 gtcttggctc tgcggtggat gaccttgatt ggtacttgag tagagtggcc
1601 tgtcgagggt gacgaaggtt gcattcttta gtgtccagct cttgagtgcg
1651 taattcttcg cctcttctag gaattcttta tatgaggatg ttgggcctgg
1701 attgcagagg aagatagagg gaattccgcc tttaatttga attggcttcc
1751 cgtactttgt gttgctttgc cagtccctct gggccccaaa gaattctttc
1801 cagtgcttta gatagtgcgg gtcgacgtca tcaatgacgt tataccaagc
1851 atcattagaa taaacctttg gacttaagtc taaatgacca cataagtaat
1901 tatgtggccc taatgaccta gcccaaacag ttttgccggt acgactatcg
1951 ccctctacta caatactatt cggcctccac ggccgcgcag cggcacccat
2001 gacattctca gacacgcact cttcaagttc ttctggaact tgagtaaaag
2051 aagacgaaag aaaaggagaa acataaggag ctgggggctc ttgaaaaatc
2101 ctatctaaat tagtttttaa attatgatat tgaaaaataa attctttagg
2151 gagtttctcc ctaataatag ccatagcggc ttcagcggaa tctgcattta
2201 aggcctctgc tgcagcgtcg ttagcatttc gacagcctcc cctagcactt
2251 ctgccgtcga cctggaatac cccccattca agggtgtctc cgtccttgtc
2301 gatgtaggac ttgacgtcgg agcttgattt agctccctga atgttcggat
2351 ggaaatgtgt tgacctggtt ggggatacca ggtcgaagaa tctgttattc
2401 gtgcactggt atttcccctc gaactgcata agcacgtgga gatgaggttc
2451 cccatttgtg tgcaactctc tgcagacttt gatgaatttt ttatttgttg
2501 gggttgacag atttagaagt tgctctaacg cttcttcttt agtgagggag
2551 cattttggga aagtgaggaa ataatttttg gaatttattt taaaacgctt
2601 tggaggagcc atttggtcaa tgtaccccaa ttgaccgctc ttggcatttg
2651 gtgcctacaa tcggtgtaat ggggtacaat atatacctgt acccctaatg
2701 gcaatatggt aatttggtaa agagcttttt actttaattc gaaattggaa
2751 tttcgaattt tttttagcgg ccatccgtat aatatt