Sequence of DPV Tomato leaf curl Taiwan virus
Tomato leaf curl Taiwan virus complete genome, isolate ZJ20
ACC No: AM698112
Dated: 2008-03-14 | Length: 2740 | CRC: -1353575042
ID AM698112; SV 1; circular; genomic DNA; STD; VRL; 2740 BP.
XX
AC AM698112;
XX
DT 24-JUN-2007 (Rel. 92, Created)
DT 14-MAR-2008 (Rel. 95, Last updated, Version 2)
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DE Tomato leaf curl Taiwan virus complete genome, isolate ZJ20
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KW AC1 gene; AC2 gene; AC3 gene; AC4 gene; AV1 gene; AV2 gene; coat protein;
KW complete genome; rep protein.
XX
OS Tomato leaf curl Taiwan virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2740
RA Zhou X.P.;
RT ;
RL Submitted (24-APR-2007) to the EMBL/GenBank/DDBJ databases.
RL Zhou X.P., Zhejiang University, Institute Of Biotechnology, 268 Kaixuan
RL Road, Zhejiang, 310029, CHINA.
XX
RN [2]
RA Mugiira R.B., Liu S.S., Zhou X.P.;
RT "Tomato yellow leaf curl virus and Tomato leaf curl Taiwan virus invade
RT South-east coast of China";
RL J. Phytopathol. 156:217-221(2008).
XX
FH Key Location/Qualifiers
FH
FT source 1. .2740
FT /organism="Tomato leaf curl Taiwan virus"
FT /specific_host="Lycopersicon esculentum"
FT /isolate="ZJ20"
FT /mol_type="genomic DNA"
FT /country="China:Zhejiang Province"
FT /lat_lon="31.00 N 118.00 E"
FT /virion
FT /db_xref="taxon:196093"
FT CDS 132. .473
FT /gene="AV2"
FT /product="AV2 protein"
FT /db_xref="GOA:Q09M62"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:Q09M62"
FT /protein_id="CAM91827.1"
FT /translation="MWDPLLNDFPESVHGLRCMLAIKYLHLVENTYSPDTLGYDLIRDL
FT ILVIRARDYVEATRRYSHFHSRFQGSSPSELRQPIWQPCSCPHCPRHKQKEFMGESALV
FT QKAQDVQDV"
FT CDS 292. .1065
FT /gene="AV1"
FT /product="coat protein"
FT /db_xref="GOA:Q09M61"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:Q09M61"
FT /protein_id="CAM91828.1"
FT /translation="MSKRPADIVISTPASKVRRRLNFASPYGNRVAAPTVLVTNKKSSW
FT VNRPLFRKPKMYRMYKSPDVPRGCEGPCKVQSFEQRHDISHVGKVLCVSDVTRGNGLTH
FT RVGKRFCVKSIYVLGKIWMDENIKTKNHTNTVMFFLVRDRRPYGTPQDFGQIFNMYDNE
FT PSTATVKNDNRDRFQVLRRFQATVTGGQYACKEQALVRKFMKINNHVTYNHQEAAKYDN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSVQN"
FT CDS complement(1062. .1466)
FT /gene="AC3"
FT /product="AC3 protein"
FT /db_xref="InterPro:IPR000657"
FT /db_xref="UniProtKB/TrEMBL:Q072S2"
FT /protein_id="CAM91829.1"
FT /translation="MDSRTGELITAAQAENGVYTWTINNPLYFKITQHNQRPFLRNHDV
FT TTIQVQFNYNLRKALGIHQCFIICQIWTRLQPRTSHFLRVFKYQCMKYLDNLGVISLNN
FT VFRAMRHVLYNVIEGTIDAQFSHIIKFKIY"
FT CDS complement(1207. .1614)
FT /gene="AC2"
FT /product="AC2 protein"
FT /db_xref="GOA:A6H4U3"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:A6H4U3"
FT /protein_id="CAM91830.1"
FT /translation="MRNSSPSPSHSTHVPIKVQHKIAKNRPIRRRRVDLPCGCSYYLGI
FT NCASHGFSHRGTHHCSSSREWRVYLDNQQSPLFQNNTTQPETISTEPRRNDNTSSIQLQ
FT PEESVGNTPVFYNLPDLDSFTTSDLAFLEGI"
FT CDS complement(1514. .2602)
FT /gene="AC1"
FT /product="rep protein"
FT /db_xref="GOA:A6H4U4"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProtKB/TrEMBL:A6H4U4"
FT /protein_id="CAM91831.1"
FT /translation="MPPLNKFRINAKNYFLTYPHCSLTKEEALSQIQALQAPTNKLFIR
FT VCRELHEDGTPHLHILIQFEGKFQCKNNRFFDLTSPTRSAHFHPNIQGAKSSTDVKTYM
FT EKDGDVLDHGIFQVDGRSTRGGCQSANDAYAEAINSGSKAEALNILREKAPKDFVLQFH
FT NLNSNLDRIFTPPLEVYISPFNFSSFDQVPRELVKWVAENVRDSAARPWRPMSIVVEGV
FT SRTGKTLWARSLGPHNYLCGHLDLSPRVYSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEEKNFALKDWALKNAEFITLTEPL
FT YSRANQGPTQNSEEQTNSQAEG"
FT CDS complement(2152. .2445)
FT /gene="AC4"
FT /product="AC4 protein"
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProtKB/TrEMBL:Q072R9"
FT /protein_id="CAM91832.1"
FT /translation="MGLLTCTFSSNSKENSNVKITDSSTSHPQPGQHISIRTFRELRAQ
FT QMSKPIWRKTETCLIMEFSRSMEDQLEEVANLQTTHMPRQSIQGPKLRPSIY"
XX
SQ Sequence 2740 BP; 726 A; 536 C; 607 G; 871 T; 0 other;
am698112 Length: 2740 14-MAR-2008 Type: N Check: 8112 ..
1 accggatggt cgcgaatttt ttaagtgggt cctacgcact aatgttggtc
51 ggccaataga aacgctctcc caaagcttat taacaaaaat acccgttata
101 aatacttggt ggctaagtta cagtcgctaa aatgtgggat ccacttttaa
151 atgattttcc ggagtctgta catggtctac ggtgtatgct tgccattaag
201 tatctacatc ttgtagaaaa tacatattcc ccggatactt tgggttacga
251 tcttatacgt gatttgattt tagttatccg agctagggat tatgtcgaag
301 cgacccgccg atatagtcat ttccactccc gcttccaagg ttcgtcgccg
351 tctgaacttc gccagcccat atggcaaccg tgtagctgcc cccactgtcc
401 tcgtcacaaa caaaaagagt tcatgggtga atcggccctt gttcagaaag
451 cccaagatgt acaggatgta taaaagccca gatgttcctc gtggttgtga
501 aggcccatgt aaggtacagt catttgaaca gcgtcatgat atatcccatg
551 tgggcaaggt attatgtgtg tccgatgtca cacgtggtaa tgggctgacc
601 catcgtgttg ggaagaggtt ttgtgttaag tccatttatg tgttgggtaa
651 gatatggatg gatgagaata tcaagacgaa aaatcacaca aatactgtga
701 tgttcttctt agtccgtgat agaaggcctt atggtactcc acaagatttc
751 ggtcagatct ttaatatgta tgataatgag cctagcactg caacggtgaa
801 gaatgataat agagataggt ttcaagttct ccgtcgattc caggctacgg
851 tgactggcgg tcagtatgcc tgcaaagaac aagctctagt taggaagttt
901 atgaaaatca acaaccatgt tacttataat caccaagagg ctgctaaata
951 cgataaccat acagagaatg ctttgttgtt gtatatggca tgtactcatg
1001 ccagtaatcc tgtgtatgct actttgaaaa tcagaatcta tttctatgat
1051 tctgttcaaa attaataaat tttaaatttt attatatgtg aaaactgagc
1101 atcgattgtg ccctctatta cattgtatag tacatgtctc attgctctaa
1151 atacattgtt taaactaata acgcctaaat tgtctaaata cttcatacat
1201 tggtacttaa ataccctcaa gaaatgcgag gtccgaggtt gtaaacgagt
1251 ccaaatctgg caaattataa aacactggtg tattcccaac gctttcctca
1301 ggttgtagtt gaattgaact tgtattgtcg ttacgtcgtg gttccgtaga
1351 aatggtctct ggttgtgttg tgttattttg aaatagaggg gattgttgat
1401 tgtccaggta tacacgccat tctctgcttg agctgcagtg atgagttccc
1451 ctgtgcgaga atccatgtga tgcgcaatta attccaagat aatacgagca
1501 cccacaagga agatcaaccc tccgcctgcg aattggtctg ttcttcgcta
1551 ttttgtgttg gaccttgatt ggcacgtgag tagagtggct cggtgagggt
1601 gatgaattcc gcattcttta aagcccagtc tttgagtgcg aaattctttt
1651 cttcgtctaa gtactcttta tatgatgatg ttggccctgg attgcaaagg
1701 aagattgttg ggataccacc tttaatttga attggtttcc cgtatttggt
1751 gttgctttgc cagtcccttt gggcccccat gaattcttta aagtgcttta
1801 gatagtgggg atcgacgtca tcaatgacgt tataccatgc ctcattactg
1851 tacactcttg ggcttaggtc gagatgacca cacaagtaat tgtgtgggcc
1901 tagggacctg gcccaaagtg tcttcccagt acgactcaca ccctctacaa
1951 caatactcat gggtctccat ggccgcgcag cggaatccct cacgttctcg
2001 gcaacccatt ttacaagttc tcttggaact tgatcaaatg aagaaaaatt
2051 aaaaggagaa atataaactt ccaatggagg tgtaaaaatt ctatctaaat
2101 tactatttaa attatgaaac tgtaaaacaa aatctttggg agctttctcc
2151 cttaatatat tgagggcctc agctttggac cctgaattga ttgcctcggc
2201 atatgcgtcg tttgcagatt ggcaacctcc tctagttgat cttccatcga
2251 cctggaaaat tccatgatca agcacgtctc cgtctttctc catataggtt
2301 ttgacatctg ttgagctctt agctccctga atgttcggat ggaaatgtgc
2351 tgacctggtt ggggatgtga ggtcgaagaa tctgttattt ttacattgga
2401 attttccttc gaattggatg agaatgtgca ggtgaggagt cccatcttcg
2451 tgaagctctc tgcaaaccct aatgaatagt ttatttgttg gggcttgtag
2501 agcttgtatt tgggaaagtg cctcttcttt ggttagggag cagtgtggat
2551 acgtgaggaa gtagttcttt gcatttatcc tgaatttatt aagtggaggc
2601 atgttgactt agtcaattgg tgtctctcaa acttctctat gtatcggtgt
2651 attggggtct tatttatact tggacactaa atggcattta tgtaattaca
2701 ttaatttacc aaggggtaaa gcggccatcc gtttaatatt