Sequence of DPV Bean leaf curl Madagascar virus
Bean leaf curl Madagascar virus cp, v2, rep, c2, c3 and c4 genes, isolated in Fort Dauphin, Madagascar
ACC No: AM701757
Dated: 2007-07-26 | Length: 2754 | CRC: -607494777
ID AM701757; SV 1; linear; genomic DNA; STD; VRL; 2754 BP.
XX
AC AM701757;
XX
DT 26-JUL-2007 (Rel. 92, Created)
DT 26-JUL-2007 (Rel. 92, Last updated, Version 1)
XX
DE Bean leaf curl Madagascar virus cp, v2, rep, c2, c3 and c4 genes, isolated
DE in Fort Dauphin, Madagascar
XX
KW c2 gene; c3 gene; c4 gene; coat protein; cp gene; rep gene;
KW replication associated protein; v2 gene.
XX
OS Bean leaf curl Madagascar virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
XX
RN [1]
RP 1-2754
RA Lefeuvre P.;
RT ;
RL Submitted (25-APR-2007) to the EMBL/GenBank/DDBJ databases.
RL Lefeuvre P., AMIS, CIRAD - UMR PVBMT, 7 Chemin de l'IRAT, Ligne Paradis,
RL Saint Pierre, 97410, REUNION.
XX
RN [2]
RA Lefeuvre P., Martin D.P., Hoareau M., Naze F., Becker N., Delatte H.,
RA Reynaud B., Lett J.M.;
RT "Begomovirus "melting pot" in the South West Indian Ocean Islands:
RT molecular diversity and evolution through recombination";
RL Unpublished.
XX
FH Key Location/Qualifiers
FH
FT source 1. .2754
FT /organism="Bean leaf curl Madagascar virus"
FT /mol_type="genomic DNA"
FT /country="Madagascar:Anosy, Fort Dauphin"
FT /isolation_source="Phaseolus vulgaris"
FT /virion
FT /db_xref="taxon:439420"
FT CDS 144. .512
FT /transl_table=1
FT /gene="v2"
FT /product="V2 protein"
FT /protein_id="CAM91886.1"
FT /translation="MWDPLLNDFPETVHGFRCMLAVKYLQAVRESYDPSTLGYDLLSDL
FT IGVVRRTNYVEATSRYHHFHSRLESSSPSELRQPRAVLCSCPHCPRHKQEAGLDQPAQL
FT QKTENVQNVSQPRCPKGL"
FT CDS 304. .1080
FT /transl_table=1
FT /gene="cp"
FT /product="coat protein"
FT /protein_id="CAM91887.1"
FT /translation="MSKRPADIIISTPASKVRRRLNFDSPVQSSARAPTVLVTNKRRAW
FT TNRPNYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTKGVGITH
FT RTGKRFTIKSIYILGKIWMDENIKKQNHTNTVMFFLVRDRRPYGNSPLDFGQVFNMFDN
FT EPSTATVKNDLRDHFQVMRKFTATVTGGPSGVKEQALVRRFFKINSQIVYNHQEAGKFE
FT NHTENAILLYMACTHASNPVYATLKIRIYFYDSVSN"
FT CDS complement(1077. .1478)
FT /transl_table=1
FT /gene="c3"
FT /product="C3 protein"
FT /protein_id="CAM91888.1"
FT /translation="MDSRTGELITAHQTENGVLIWEINNPLYFKTIKEIRLTHGDQTLV
FT EMQIRFNYNLRKALGIHKCFMNFRVWTTSRPLTGLFLNVFRKQIMKMLYRLGVISINNV
FT IRAVNYVLYDVLKTTVECEFTYNIQMKLY"
FT CDS complement(1222. .1626)
FT /transl_table=1
FT /gene="c2"
FT /product="C2 protein"
FT /protein_id="CAM91889.1"
FT /translation="MRSLSPSPSRCSQIPIKVQHREAKKRAIRRRRIDIPCGCTIYVAF
FT TCQDNGFTHRGTHHCASDREWRTYLGNQQSPVFQNHQGDSAHARGSNTGRDADKVQLQP
FT QEGFGDSQVFHELQGLDDLTASDWSFLKCI"
FT CDS complement(1526. .2614)
FT /transl_table=1
FT /gene="rep"
FT /product="replication associated protein"
FT /protein_id="CAM91890.1"
FT /translation="MAPPKKFRINAKHYFLTFPKCSLSKEEALEQLKTLNTPTNKKYIK
FT ICRELHEDGQPHLHVLLQFEGKFNCQNQRFFDLVSPNRSAHFHPNIQGAKSSSDVKSYI
FT DKDGDTLEWGEFQVDGRSARGGQQTANDAYATALNSGSKQEALRVIRELAPKDFVLQYH
FT NLVNNLDRIFQEPPVPYSCPFLSSSFDQVPEELEEWAAENVVEAAARPSRPISIVVEGE
FT SRTGKTVWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQKDW
FT QSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNAHLKSWALKNAVFVTLSEPL
FT FSNTNQGSASGGQEESNQETQD"
FT CDS complement(2155. .2457)
FT /transl_table=1
FT /gene="c4"
FT /product="C4 protein"
FT /protein_id="CAM91891.1"
FT /translation="MASLISMCFSSSKGSSTAKIRDSSTWSPQIGQHISIQTFRELNPA
FT PTSSPTSTRMETHSNGENSRSTGDLQEEGSRQPMTLTPQHLTREVSKRLLGLYGS"
XX
SQ Sequence 2754 BP; 701 A; 637 C; 611 G; 805 T; 0 other;
am701757 Length: 2754 26-JUL-2007 Type: N Check: 9215 ..
1 accggtgggc gcgaaaaaaa aaaagtggtc ccctcccacg tgaacatgtc
51 gcgcgagttc tgtccaatca gaacgcgcgc tctacgcatt ataatttgaa
101 atttgaaata taaacttgct ccctaagttt gacacagata actatgtggg
151 atcctctgtt gaacgacttc cctgaaaccg ttcacggttt ccgttgtatg
201 ctcgccgtga aatacctgca ggcggttaga gagtcttacg atcccagcac
251 actcggttac gatcttctaa gcgatctcat cggagttgtc cgccgtacca
301 actatgtcga agcgaccagc agatatcatc atttccactc ccgcctcgaa
351 agttcgtcgc cgtctgaact tcgacagccc cgtgcagtcc tctgctcgtg
401 cccccactgt cctcgtcaca aacaagaggc gggcctggac caaccggccc
451 aactacagaa aaccgagaat gtacagaatg tatcgcagcc cagatgtccc
501 aaagggttgt gagggcccgt gtaaggtaca gtcttatgag cagcgtgatg
551 atatcaaaca tactggtatt gttagatgtg tttctgatgt cactaagggt
601 gttggtatta cgcatcgcac tggaaagcgt tttacgatca agtccatcta
651 tatcttgggg aagatatgga tggatgagaa catcaagaaa cagaatcaca
701 ctaacactgt aatgttcttc cttgtccgag atagaagacc gtatgggaac
751 tctcccttgg attttggtca ggtttttaac atgtttgata acgaacctag
801 cactgctacg gtcaagaacg atctccgtga tcattttcag gttatgagga
851 agtttactgc tactgtcact ggtggtcctt caggagtgaa ggaacaagcc
901 ctagttcgtc gatttttcaa gattaatagt cagattgttt acaaccatca
951 agaggctgga aagttcgaga atcatactga gaatgctata ttgttgtaca
1001 tggcatgtac tcatgcctca aaccctgtgt atgctacgtt gaagatacgg
1051 atctacttct acgattcagt atctaattaa tataatttca tttgaatatt
1101 atatgtgaat tcgcattcta cagttgtttt caaaacatcg tacaaaacat
1151 aattaactgc cctaattaca ttgttaattg aaatgactcc taatctatac
1201 aacattttca ttatctgctt cctaaataca tttaagaaaa gaccagtcag
1251 aggccgtgag gtcgtccaga ccctgaagtt catgaaacac ttgtgaatcc
1301 ccaaagcctt cctgaggttg tagttgaacc ttatctgcat ctctaccagt
1351 gtttgatccc cgtgcgtgag ccgaatctcc ttgatggttt tgaaatacag
1401 gggattgttg atttcccaga taagtacgcc attctctgtc tgatgcgcag
1451 tgatgagttc ccctgtgcgt gaatccattg tcttggcacg tgaatgcgac
1501 gtatatggtg caaccacaag ggatgtcaat cctgcgtctc ctgattgctc
1551 tcttcttggc ctcccgatgc tgaaccttga ttggtatttg agaacagcgg
1601 ctcggagagg gtgacaaaga ccgcattctt caatgcccag gatttgagat
1651 gcgcgttctt gtcctcgtct aaaaactctt tatacgagga attgggacct
1701 ggattgcaga ggaagattgt tgggatgccc cctttaattt gaactggctt
1751 cccgtacttt gtgttgcttt gccagtcctt ttgggccccc atgaactcct
1801 taaagtgttt cagataatgc gggtcgacgt catcaatgac gttataccat
1851 gcgtcattac tgaacacctt tgggcttaga tctagatggc cgcacagata
1901 attgtgaggc ccaagacttc tggcccatac agtcttccct gtcctgctct
1951 ctccttcaac tactatacta atcggcctac ttggccgcgc agcggcctca
2001 acgacgttct ccgccgccca ttcttcaagt tcttctggaa cttgatcgaa
2051 agaagaagac aaaaagggac atgaataagg aaccggtggt tcctgaaaaa
2101 tcctatctaa attattaact aaattatgat actgtaaaac aaaatctttg
2151 ggagctaact cccgtataac cctaagagcc tcttgcttac ttcccgagtt
2201 aagtgctgtg gcgtaagcgt cattggctgt ctgctgccct cctcttgcag
2251 atctcccgtc gacctggaat tctccccatt cgagtgtgtc tccatccttg
2301 tcgatgtagg acttgacgtc ggagctggat ttagctccct gaatgtttgg
2351 atggaaatgt gctgacctat ttggggagac caggtcgaag aatctctgat
2401 tttggcagtt gaacttccct tcgaactgga gaagcacatg gagatgaggc
2451 tggccatcct cgtggagttc tctgcagatc ttgatgtatt ttttgtttgt
2501 tggggtattt agggttttga gttgctcgag tgcttcttct ttgcttaaag
2551 agcattttgg gaaagtcagg aaatagtgct tagcatttat tctgaatttc
2601 ttaggaggag ccatttagtc aactagcacc gattgaccag gctgtttgct
2651 tatcccctgt gaattggggt tctatatata gttagcacca aatggcataa
2701 ttgtaaaaat ccccaacaaa tttgaacccc catagcgccc accgttctaa
2751 tatt