Sequence of DPV Tomato leaf curl Namakely virus
Tomato leaf curl Namakely virus, isolate Comoros:Dimadjou:2001
ACC No: AM701761
Dated: 2011-03-15 | Length: 2772 | CRC: 752935201
ID AM701761; SV 1; linear; genomic DNA; STD; VRL; 2772 BP.
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AC AM701761;
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DT 26-JUL-2007 (Rel. 92, Created)
DT 15-MAR-2011 (Rel. 108, Last updated, Version 2)
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DE Tomato leaf curl Namakely virus, isolate Comoros:Dimadjou:2001
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KW .
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OS Tomato leaf curl Namakely virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus;
OC unclassified Begomovirus.
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RN [1]
RP 1-2772
RA Lefeuvre P.;
RT ;
RL Submitted (25-APR-2007) to the EMBL/GenBank/DDBJ databases.
RL Lefeuvre P., AMIS, CIRAD - UMR PVBMT, 7 Chemin de l'IRAT, Ligne Paradis,
RL Saint Pierre, 97410, REUNION.
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RN [2]
RA Lefeuvre P., Martin D.P., Hoareau M., Naze F., Becker N., Delatte H.,
RA Reynaud B., Lett J.M.;
RT "Begomovirus "melting pot" in the South West Indian Ocean Islands:
RT molecular diversity and evolution through recombination";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .2772
FT /organism="Tomato leaf curl Namakely virus"
FT /isolate="Comoros:Dimadjou:2001"
FT /mol_type="genomic DNA"
FT /country="Comoros:Grande Comore, Dimadjou"
FT /isolation_source="Lycopersicum esculentum"
FT /db_xref="taxon:439421"
FT CDS 196. .492
FT /transl_table=1
FT /gene="v2"
FT /product="V2 protein"
FT /db_xref="InterPro:IPR002511"
FT /db_xref="InterPro:IPR005159"
FT /db_xref="UniProtKB/TrEMBL:A7DXJ1"
FT /protein_id="CAM91910.1"
FT /translation="MLAVKYLQAVEETYEPNTLGHDLIRDLICVIRARDYVEATRRYNY
FT FHSRLESASKAELRQPVYQPCCCPHCPRHKQTSLMDVQAHVPKAQDVQNVQKP"
FT CDS 302. .1078
FT /transl_table=1
FT /gene="cp"
FT /product="coat protein"
FT /db_xref="GOA:A7DXJ2"
FT /db_xref="InterPro:IPR000263"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProtKB/TrEMBL:A7DXJ2"
FT /protein_id="CAM91911.1"
FT /translation="MSKRPGDIIISTPVSKVRRRLNFDSPFTSRAVVPTVPGTSRRRSW
FT TYRPMYRKPRMYRMYKSPDVPRGCEGPCKVQSFEQRDDVKHTGIVRCISDVTRGSGITH
FT RVGKRFCIKSIYLLGKIWMDENIKKQNHTNQVMFFLVRDRRPYGSAPMDFGQVFNMFDN
FT EPSTATVKNDLRDRFQVMRKFHATVVGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYE
FT NHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN"
FT CDS complement(1221. .1628)
FT /transl_table=1
FT /gene="c2"
FT /product="C2 protein"
FT /db_xref="GOA:A7DXJ3"
FT /db_xref="InterPro:IPR000942"
FT /db_xref="UniProtKB/TrEMBL:A7DXJ3"
FT /protein_id="CAM91912.1"
FT /translation="MQPSSPSTSHCSQIPIKVKHRIAKKRPIRRKRIDLGCGCSYYLHI
FT NCINHGFTHRGTHHCSSSTEWRVYLGDTKSPIFQNHLPRQSTIQHEPRHPINPDTVQPQ
FT LEEGIGDSQMFSQLQGLDELTPSDWSFLKSV"
XX
SQ Sequence 2772 BP; 732 A; 568 C; 639 G; 833 T; 0 other;
am701761 Length: 2772 15-MAR-2011 Type: N Check: 8950 ..
1 accggatggc cgcgcccccg aaaaagctaa gtggtccccg cgcactagac
51 tatgtcagcc aatcagaaag ccgcgtgaaa gcttagttat ttgttttttg
101 tctttatata cttggtcccc aagttttggt ctccagtcag ccatgtggat
151 ccacttttga acgagttccc agactctgtt cacgggtttc gttgcatgct
201 tgccgttaaa tatttgcagg ccgtagaaga aacctacgag cccaatacat
251 tgggccacga tctaattcgt gatcttattt gtgttatcag ggcccgtgat
301 tatgtcgaag cgacccggag atataattat ttccactccc gtctcgaaag
351 tgcgtcgaag gctgaacttc gacagcccgt ttaccagccg tgctgttgtc
401 cccactgtcc caggcacaag cagacgtcgc tcatggacgt acaggcccat
451 gtaccgaaag cccaggatgt acagaatgta caaaagccct gatgttccta
501 ggggttgtga aggcccatgt aaggtccagt cgtttgagca gagggatgat
551 gtcaagcata ccggtattgt tcgttgtatt agtgatgtta cgcgtggttc
601 gggtattacc catagagttg gcaagaggtt ttgtattaag tctatttacc
651 ttttagggaa gatctggatg gatgaaaata ttaagaagca gaatcatact
701 aatcaggtta tgttttttct cgttcgtgat agaaggccct atggctcagc
751 cccaatggat tttggacagg tttttaacat gtttgataat gagcccagta
801 cagctacggt gaagaatgat ttgagagaca gatttcaagt tatgcgcaaa
851 tttcatgcaa ctgttgttgg tgggccctca ggaatgaagg agcaggcatt
901 agttaagaga ttttttagga ttaatagcca tgtaacttat aatcatcagg
951 aggcagcgaa gtatgaaaat catactgaga atgccttgtt gttgtatatg
1001 gcatgtactc atgcttcgaa tcctgtgtat gctactctta agatacggat
1051 ctatttttac gattcggtca gcaattaata aatattgaat tttatttcat
1101 gattctccgt aacttggagt gtatttataa gtacatcgta caatacataa
1151 tcaactggct tttattacag aattaattga aactacacct aatctatcta
1201 aatattttaa aacttgagtc ctaaacactc ttaagaaacg accagtctga
1251 gggcgtaagc tcgtccagac cttgaagttg agaaaacatc tgtgaatccc
1301 caattccttc ctcaagttgt ggttgaaccg tatctggatt aataggatgt
1351 cttggttcat gttgaatggt cgactgtcgt ggtagatgat tttgaaatat
1401 aggggatttt gtatctccca aataaacacg ccactctgtg cttgagctgc
1451 agtgatgagt tcccctgtgc gtaaatccat ggttgatgca gttgatgtgt
1501 agatagtagg agcagccaca gcctaggtct atgcgcttac gtcgaatggg
1551 tctcttcttc gctatgcggt gtttgacctt gattggtatt tgagaacaat
1601 ggctcgtgga gggtgacgaa ggttgcattc tttagtgccc agtcttttag
1651 tggtgcattc ttttcctcgt ctaggaactc tttatacgag gaagttggtc
1701 ctggattgca aaggaagata gtgggaattc cgcctttaat ttgaattggc
1751 ttcccgtatt ttgtgttgct ttgccagtcc ctttgtgcac ccatgaattc
1801 tttgaagtgc tttaaataat gcgggtccac gtcatcaatg acgttgaacc
1851 atgcatcatt actgtacacc tttgggctaa gatcaagatg accacacaaa
1901 tagttgtggg gtcccatgat ctggcccaca ttgtcttccc cgtccgacta
1951 tcaccctcaa tcacaatact aatcggtctc caaggccgcg cagcggaacc
2001 catgacgttc tcagacaccc agacttcaag ttcttccgga acttgattaa
2051 aagaagaaga aagaaaagga gaaacataag gagccggagg ctcctgaaaa
2101 atcctatcta aattactatt taaattatga aactgtaaaa caaaatcttt
2151 tggagctaac tccctaatga ctctaagagc ctctgactta ctgcctgagt
2201 taagtgctgc ggcgtaagcg tcattggctg actgttgtcc cccccttgca
2251 gatcgtccat cgatctgaaa ctcgccccac tcaagggtgt ctccgtcctt
2301 gtcgatgtag gacttgacgt cggaactgga tttagctccc tgaatgttcg
2351 gatggaaatg tgctgaccct tgttggggat acaaggtcga agaatcgctg
2401 atttgcgcac tggtatttac cctcgaactg gataagcaca tgcagatgag
2451 gttccccatt ttcgtgtaat tctctgcaaa ttttgatgaa taatttattg
2501 actggggttt ctaaggcttg tatttgggat agtgcttcct cttttgtgag
2551 agagcacttt ggataagtga ggaaataatt tttagcaaaa attttaaaac
2601 gacgtggagg agccatttag tcaatgtaca ccgattgact agcgagagca
2651 tttggtgcct gcaatcggtg tatcggtgtc caatatatag gtgtacaccg
2701 aatggcaatt tggtaaaaag cctcattgta atttgaattt cgaaatccaa
2751 aagcggccat ccgtataata tt