Sequence of DPV Rice yellow mottle virus

Rice yellow mottle virus CP gene for coat protein, genomic RNA, isolate Ga1

ACC No: AM765810

Dated: 2010-09-07 | Length: 720 | CRC: -318353425

                
ID   AM765810; SV 1; linear; genomic RNA; STD; VRL; 720 BP.
XX
AC   AM765810;
XX
DT   12-JUL-2008 (Rel. 96, Created)
DT   07-SEP-2010 (Rel. 106, Last updated, Version 2)
XX
DE   Rice yellow mottle virus CP gene for coat protein, genomic RNA, isolate Ga1
XX
KW   coat protein; CP gene.
XX
OS   Rice yellow mottle virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Sobemovirus.
XX
RN   [1]
RP   1-720
RA   Fargette D.;
RT   ;
RL   Submitted (11-JUL-2007) to the EMBL/GenBank/DDBJ databases.
RL   Fargette D., Rpb, Ird, 911 Avenue Agropolis, 34394 Montpellier cedex 5,
RL   FRANCE.
XX
RN   [2]
RA   Sere Y., Sorho F., Onasanya A., Jobe L., Darboe S., Bojang Y., Touray M.L.,
RA   Pinel-Galzi A., Fargette D.;
RT   "First Report of Rice yellow mottle virus in Rice in The Gambia";
RL   Plant Dis. 92(2):316-316(2008).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .720
FT                   /organism="Rice yellow mottle virus"
FT                   /isolate="Ga1"
FT                   /mol_type="genomic RNA"
FT                   /country="Gambia"
FT                   /db_xref="taxon:31744"
FT   CDS             1. .720
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /db_xref="GOA:B4EQR4"
FT                   /db_xref="InterPro:IPR000937"
FT                   /db_xref="UniProtKB/TrEMBL:B4EQR4"
FT                   /protein_id="CAO78673.1"
FT                   /translation="MARKGKKISSNQGQQGKKKSRRPRGRSAEPQLQRAPVAQASRISG
FT                   MVPGPLSSNTWPIHSVEFLADFKRSSTSADATTYDCVPFNLSRVWSLARCYSLWKPTRW
FT                   DVVYLPEVSAATAGSIEMCYLYDYADTIPSDTGKMSRTAGFVTSSVWYGAEGCHLLNGG
FT                   SARNAVVASMDCSRVGWKRVTSSIPSSVDPNVVNTILPARLAVRSSIKPTADDTPGKLY
FT                   AIVSMVLRDPVDPTLNT"
XX
SQ   Sequence 720 BP; 156 A; 193 C; 213 G; 158 T; 0 other;

am765810 Length: 720  07-SEP-2010  Type: N  Check: 128  ..

       1  atggccagga agggcaagaa aatcagctcc aaccagggtc agcaaggaaa
      51  gaagaagagc cgacgccctc gcgggcgttc ggcggagccc cagcttcaac
     101  gggctccagt ggctcaggcc tcccggatat ctgggatggt tcctggtcca
     151  ctatcttcta acacctggcc gatccactcc gtggaattcc tggcggattt
     201  caagcggagt tccacatcag cggatgcgac gacatacgat tgtgtgccgt
     251  tcaatttgtc gcgggtgtgg agtcttgcac gttgttactc actgtggaag
     301  ccaacacggt gggatgtggt ctacctccca gaggttagcg ccgcgacagc
     351  tggaagtatc gagatgtgtt atctctacga ctacgctgac accatcccaa
     401  gtgacacggg caagatgagc aggacggcgg gcttcgtcac ctctagcgtt
     451  tggtacggcg cggagggctg ccatttgttg aatggtggct cagcacgaaa
     501  tgctgtggtc gcctcgatgg attgttcccg agtcggctgg aaacgcgtta
     551  ctagctctat tcctagtagc gtggatccca acgtcgtaaa caccatactg
     601  ccagctaggc tagctgtgcg gtcgtcgatc aaaccgacgg ctgatgatac
     651  gccggggaaa ctctacgcta ttgtcagtat ggtcctgcgg gatccggttg
     701  atccaacact caatacgtga