Sequence of DPV Peanut stunt virus
Peanut stunt virus segment RNA1, complete sequence
ACC No: AM905353
Dated: 2009-07-14 | Length: 3325 | CRC: -1172643432
ID AM905353; SV 1; linear; genomic RNA; STD; VRL; 3325 BP.
XX
AC AM905353;
XX
DT 01-APR-2008 (Rel. 95, Created)
DT 14-JUL-2009 (Rel. 101, Last updated, Version 2)
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DE Peanut stunt virus segment RNA1, complete sequence
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KW 1a gene; 1a protein; complete genome.
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OS Peanut stunt virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC Cucumovirus.
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RN [1]
RP 1-3325
RA Salanki K.;
RT ;
RL Submitted (07-NOV-2007) to the EMBL/GenBank/DDBJ databases.
RL Salanki K., Pepper Genetics and Breeding Group, Agricultural Biotechnology
RL Center, Godollo Szent-Gyorgyi A. u.4, H-2100, HUNGARY.
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RN [2]
RA Kiss L., Sebestyen E., Laszlo E., Salamon P., Balazs E., Salanki K.;
RT "Nucleotide sequence analysis of peanut stunt virus Rp strain suggests the
RT role of homologous recombination in cucumovirus evolution";
RL Arch. Virol. 153(7):1373-1377(2008).
XX
FH Key Location/Qualifiers
FH
FT source 1. .3325
FT /organism="Peanut stunt virus"
FT /segment="RNA1"
FT /host="Robinia pseudoacacia"
FT /lab_host="Nicotiana benthamiana"
FT /isolate="Rp"
FT /mol_type="genomic RNA"
FT /country="Hungary:Godollo"
FT /collected_by="Pal Salamon"
FT /db_xref="taxon:12313"
FT CDS 85. .3078
FT /gene="1a"
FT /product="1a protein"
FT /db_xref="GOA:B1VCT8"
FT /db_xref="InterPro:IPR002588"
FT /db_xref="UniProtKB/TrEMBL:B1VCT8"
FT /protein_id="CAP19049.1"
FT /translation="MATSSFNLSELVATRGSSGLVASALVDKVAAEQLEEQLHHQRRGL
FT KVYIRNRLDVKESEVIRNRYGGKYDLHLSQQEHAPHGLAGALRLCETLDCLDAFPRTGL
FT RQDLVLDFGGSWVTHFLRGHNVHCCSPCLGVRDKMRHTERLLSMRKAILNDPQNFEGRQ
FT PNFCTNPAEKCDVQAHYAISIHGGYDMGFEGLCRAMNAHGTIFLKGTMMFDGAMLFDDS
FT GFIPELKCHWRKIKNAFSEKENASSLSSKLNLVVSGKTLIAFDFENESTMSYVHEWKNI
FT KSFLTDQTFSYNGYTYGIERCVIYAGIMTYKIIGVPGVCPPEIIRHCVWFPSLKDYVGL
FT KIPTSADLVDWKTVRLPLSTLRDTEEIAMRCYNDKKTWQDQFKIILGVLSSKSSTIVIN
FT GMAMQAGERIDMDDYPFIGFAIMLHTRMSSEQLSEMYEAWDASIITQWGKDMTKPIRTF
FT VRLVARTLFPTLRPRDESEFLVKLSTFVTFNDECISDMGEHWDVMANAAAVAAWAVEDG
FT KQLAAEKEKALESARQQPVLEDSQPSASSPPPDIELNPMNPSVGQSKPVEPPELKSLSF
FT QTQSSDTRLAERAAAMLEYVAYERQLHNNVVSNLQRIWCSAGGDFTSNRLEGNLKFVFD
FT TYFLTDPLVNVHFSSGRWMHTVPAGVKYMVGFNEKGLGPKLDSELYIVNGDCVICNSDG
FT LSDAVKSLTAPSGTISLVDGVAGCGKTTAIKKLFQPATDLIVTANKKSAQDVRMALFGA
FT SDSKEACTFVRTADSILLNDAPAVSRVLVDEVVLLHFGQLCAVMAKLNAVRAICFGDSE
FT QIAFGSRDASFDMRRSSILPDESSTSDTTFRSPQDVVPLVARMATKAFPRGTHAKYARW
FT LSQSRVRNSVSCKSVPSVALVDMDESRFYITMTQADKAALVTRAKELQMPSSFYDNKIK
FT TVHESQGISEDHVTLVRLKSTKCDLFKSFPYCLVALTRHKVTFKYEYCGELKGDLIANV
FT LATNSPII"
XX
SQ Sequence 3325 BP; 838 A; 790 C; 797 G; 900 T; 0 other;
am905353 Length: 3325 14-JUL-2009 Type: N Check: 1641 ..
1 gttttctaag agcgtacggt tcaacccctg cctcccctga ctcaccaact
51 tctcagtttt cttcgctttg taagtttaat tcctatggct acgtcctcgt
101 tcaacctttc tgaattggta gctacccgcg gctcatcagg actagtagcg
151 tcagccctcg ttgataaagt tgcagctgag caacttgagg aacaattaca
201 tcatcaacgt agaggcctca aggtctacat ccgaaaccgg ttggatgtaa
251 aggagtcgga agtgattcga aatcggtatg gaggtaagta cgatctccat
301 ctgtcccagc aagagcacgc tcctcacggg ctcgctggtg ccctccgctt
351 gtgtgaaaca ctcgattgtc tagacgcctt tccccgcaca ggtctgaggc
401 aagacctcgt tctagacttc ggtggtagtt gggtcacaca cttcctccgc
451 ggtcacaacg tacactgctg ctctccttgt ttaggcgtcc gggacaaaat
501 gcgccatact gaacgtttat tgagcatgcg gaaagccatc ttaaacgacc
551 cccaaaattt cgagggtcgc cagccaaatt tttgcacgaa cccggctgaa
601 aaatgcgacg tacaagccca ttacgccatt tctattcatg gaggatatga
651 tatgggcttc gaaggactat gtagagccat gaatgctcac ggaaccattt
701 ttttgaaggg gacgatgatg tttgatgggg cgatgttatt tgatgactca
751 ggctttatcc ccgagttaaa gtgccactgg agaaagatca agaatgcttt
801 cagtgagaaa gagaatgctt catctctttc ttctaaattg aacctggtcg
851 tttctgggaa gactctcatt gccttcgact ttgagaatga atccaccatg
901 tcttacgtac atgagtggaa gaatatcaaa tccttcctaa cggatcagac
951 tttctcctac aatggataca cctatggcat agaacgatgt gtaatatacg
1001 ctggtattat gacctacaag ataataggtg ttcctggcgt gtgcccgccc
1051 gaaatcattc gacactgtgt ttggttcccg tccttgaagg actacgtcgg
1101 tttgaagatt ccgacatccg ccgacttagt tgattggaaa actgttcgcc
1151 tgcctctctc caccctgcgc gatactgagg agatcgccat gaggtgttat
1201 aacgataaga agacctggca agatcaattt aagatcattt tgggagtttt
1251 atcttcgaaa tcttccacta tcgttatcaa tggcatggct atgcaagctg
1301 gtgagcgcat cgacatggac gattatccct tcatagggtt cgccatcatg
1351 ctgcatacaa gaatgagttc tgaacagtta agcgaaatgt atgaagcgtg
1401 ggacgcctcc atcatcactc aatgggggaa agatatgacg aaaccaatca
1451 gaacgttcgt gaggctggtc gcccgaactc tgtttccgac gttgcgtccc
1501 cgcgatgaga gtgaattcct agtgaagctt tccacctttg tcacttttaa
1551 tgatgaatgc atctctgaca tgggagaaca ctgggatgtg atggccaacg
1601 ctgctgctgt ggcagcgtgg gctgttgagg atggtaaaca attggcagct
1651 gaaaaggaga aggccctgga atcggcccga cagcagcccg tgcttgaaga
1701 ctctcagcca tccgcctcga gccccccccc tgatatagag ttgaatccaa
1751 tgaacccatc ggtgggtcag tccaaacctg tcgaacctcc tgagcttaaa
1801 tctttatcct tccagactca atcttctgac accagattgg ccgaaagagc
1851 cgcagccatg ttggagtatg tggcttacga acgccaactg cacaataacg
1901 ttgtttcaaa tcttcaaagg atttggtgtt ctgctggcgg tgattttacc
1951 tctaatcgtc tggaaggcaa tttgaagttc gtgttcgaca cctacttttt
2001 gactgatcct ctggtcaatg tgcacttctc gtccggaaga tggatgcata
2051 cagtcccggc aggagtcaaa tatatggtgg gtttcaatga aaaggggctc
2101 ggtcctaaac tagatagtga gctgtacatc gtgaacggcg actgtgtcat
2151 ttgcaatagt gacggtctgt ccgatgcggt caaatctctg acagctccat
2201 ctggtaccat cagtctggtt gatggtgtcg ctgggtgtgg gaaaaccact
2251 gcaatcaaaa aattgttcca accggcgacc gatctcatcg taacggctaa
2301 caagaagtcg gcacaagacg tcaggatggc tctctttgga gcctcagatt
2351 caaaagaagc ttgtactttc gtgagaaccg ccgattctat tctcctcaat
2401 gatgctcccg cggtctcacg tgtgttagtc gatgaagtcg tcctattaca
2451 cttcgggcaa ttatgtgctg tcatggcgaa gttaaacgct gtcagagcta
2501 tatgtttcgg ggactccgag caaatagctt ttgggtcgag ggatgcttct
2551 ttcgacatgc gtagatcttc catcctccca gatgagtcca gcacctctga
2601 tactactttc cgaagtcctc aggacgtcgt ccctttggta gctcgcatgg
2651 caactaaagc ctttcctagg ggcacgcacg ccaagtatgc tagatggttg
2701 tcacagtcga gggtccgcaa ttccgtgagc tgcaaaagtg tccctagtgt
2751 tgcactagtt gatatggacg agtctcggtt ttatataacg atgactcaag
2801 cggacaaagc tgccttagta acgagggcga aagagttaca aatgccgagt
2851 tcattctatg ataacaagat aaagactgtg cacgaatctc aaggcatttc
2901 ggaagatcat gtgactctgg ttagattgaa aagtactaag tgtgatctct
2951 ttaaatcctt tccctactgt ttagtggctc tcactagaca taaggtcact
3001 tttaagtatg aatattgtgg tgagttgaaa ggtgatttga ttgctaatgt
3051 gttagcaaca aattctccca taatctgatc ttccacttct aagttggcag
3101 ttacattact ctaaactgtc tgaaaccact aaacaggtta tcctggtggt
3151 cgggttgtcc atccagctag cggctaaaat ggtcagtccc acccaaaagg
3201 tgggccaagt ccttacaagg gcttgaggta ctttatacta tctactccgg
3251 atagttgtga agagctgcat acaacgtatg cgttcagctc gagtaccccc
3301 tctatgaggg ctccatagga gacca