Sequence of DPV Peanut stunt virus
Peanut stunt virus segment RNA3, complete sequence
ACC No: AM905355
Dated: 2009-07-14 | Length: 2208 | CRC: -1590662010
ID AM905355; SV 1; linear; genomic RNA; STD; VRL; 2208 BP.
XX
AC AM905355;
XX
DT 01-APR-2008 (Rel. 95, Created)
DT 14-JUL-2009 (Rel. 101, Last updated, Version 2)
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DE Peanut stunt virus segment RNA3, complete sequence
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KW 3a gene; 3a protein; 3b gene; coat protein; complete genome.
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OS Peanut stunt virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC Cucumovirus.
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RN [1]
RP 1-2208
RA Salanki K.;
RT ;
RL Submitted (07-NOV-2007) to the EMBL/GenBank/DDBJ databases.
RL Salanki K., Pepper Genetics and Breeding Group, Agricultural Biotechnology
RL Center, Godollo Szent-Gyorgyi A. u.4, H-2100, HUNGARY.
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RN [2]
RA Kiss L., Sebestyen E., Laszlo E., Salamon P., Balazs E., Salanki K.;
RT "Nucleotide sequence analysis of peanut stunt virus Rp strain suggests the
RT role of homologous recombination in cucumovirus evolution";
RL Arch. Virol. 153(7):1373-1377(2008).
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FH Key Location/Qualifiers
FH
FT source 1. .2208
FT /organism="Peanut stunt virus"
FT /segment="RNA3"
FT /host="Robinia pseudoacacia"
FT /lab_host="Nicotiana benthamiana"
FT /isolate="Rp"
FT /mol_type="genomic RNA"
FT /country="Hungary:Godollo"
FT /collected_by="Pal Salamon"
FT /db_xref="taxon:12313"
FT CDS 142. .1011
FT /gene="3a"
FT /product="3a protein"
FT /db_xref="GOA:B1VCU1"
FT /db_xref="InterPro:IPR000603"
FT /db_xref="UniProtKB/TrEMBL:B1VCU1"
FT /protein_id="CAP19052.1"
FT /translation="MAFSGSSRTLTQQSSAASSDDLHKILFSPEAIKEMATKCDLGRHH
FT WMRADNAVCVRPLVPESTSNKVTRWFKSGYEAGDLPSKGYMSVPQVLCAITRTVMANAE
FT GSIRIYLADLGDDELAPIDDQVVTLHNRDLPALVSFQPTYDCPMEIVKGKSRCFVVVTE
FT RYGYIGHSGSTASVCSSWQPKFSSKNNNYRPAAAGKTLVLPYNRLSELSGPSAVARLLK
FT SQLNMQSSPFFQLPGSPVIQKAIGSEHEEGLNCNRKLPLEEVSTTPQDMVSSKPSVVNG
FT VECSGILL"
FT CDS 1269. .1919
FT /gene="3b"
FT /product="coat protein"
FT /db_xref="GOA:B1VCU2"
FT /db_xref="InterPro:IPR000247"
FT /db_xref="UniProtKB/TrEMBL:B1VCU2"
FT /protein_id="CAP19053.1"
FT /translation="MASSGSGNGSRRPRRGRRSSSKVDAHARELRALTAQLNRLVAISA
FT AQMPSLDHPTFVSSRKCRPGYTYTSLDVRPTKTEKGHSFGQRLVLPVPVSEFPKKKVSC
FT VQLRLNPSPKFDSTVWVSLRKLSPGYSLTSESVFKLFTDGNAAVLIYQHVSTGVQPRNK
FT ITFDLASVGTEIGDIGDYAIIVYSKDDTLEADEMVIHVDVEHQRIPSASALPV"
XX
SQ Sequence 2208 BP; 531 A; 536 C; 522 G; 619 T; 0 other;
am905355 Length: 2208 14-JUL-2009 Type: N Check: 1298 ..
1 gttttaaacc aaccaaaacc tgagtctgac cgcgtgccag taggactcac
51 cctgtatagt gtacatagta gatagctaat cagtgcccac gttttgtaaa
101 tataacgtgt tgttgttgtt ggttaaaacc ctcacttgag tatggctttc
151 tctgggtcta gtcggacttt aacacaacag tcctcggcgg catcatctga
201 tgatctacac aagattttat tcagccccga agccatcaaa gagatggcga
251 ctaaatgcga cctaggtcga caccactgga tgcgcgccga taatgccgtg
301 tgtgtcagac ccctcgttcc cgaatctacg tccaacaaag tgacccgatg
351 gtttaaatcc ggttatgaag ccggtgattt accatccaag ggatatatga
401 gcgtccctca agttctgtgc gccatcaccc gtaccgtaat ggctaatgct
451 gaaggttcca tcaggatcta tttagctgac ttaggtgatg atgaacttgc
501 cccgatcgat gatcaagtgg tcacactcca taaccgagac ctccctgctc
551 tggtatcgtt ccagcccacc tatgattgtc ccatggaaat agtgaaaggg
601 aaaagcaggt gttttgtcgt tgttactgaa aggtacggtt atattggaca
651 ttctgggagt accgcaagcg tgtgttctag ctggcagccg aagttctcat
701 caaagaataa caactatagg ccagccgccg ccggtaagac tctagttcta
751 ccttacaaca gattgtctga gctatcaggt ccatcagctg tagcaagact
801 gttgaaatcg cagctcaaca tgcaaagttc tcccttcttt cagttacccg
851 ggagtcctgt cattcaaaaa gcgattggta gtgagcacga ggaaggttta
901 aattgcaata gaaagctacc tttggaggag gtaagtacca cgccccagga
951 tatggttagc tcaaaaccgt cagtggttaa cggtgttgag tgttctggga
1001 ttttgttgta aatatatgaa tattatggta tttgtaaata tatttaccta
1051 tcgtgtcatc gtgttgtgtg ttacgatgat gctggcgtga tggaaggata
1101 cggacccaca ttcagttgct aaagccgtcg atataccttt tgggttcaat
1151 tccctttggt caatttcgcg ttcctttagt ctctagaatg cctatcccga
1201 actcccgtag tactatcgtg tttgtttgta ttgtctttac gtttagtacg
1251 cgtcaaccac attgtttcat ggcatcttca ggatctggta acggttctcg
1301 tcgacctcgt agagggaggc gctcttcgtc taaggtggac gctcatgcta
1351 gagagctccg cgctttgacc gctcagctga atcgtttggt agccatctcg
1401 gctgcccaga tgccaagcct cgatcatcca acctttgttt ctagcaggaa
1451 gtgtcgtccc gggtacacgt acacttcgtt ggatgtccga ccgacaaaaa
1501 ctgagaaggg ccatagtttc ggtcagaggt tagttttacc agttcccgta
1551 tctgaatttc cgaagaagaa agtttcgtgc gttcaactcc ggttgaaccc
1601 gtcgcctaag ttcgactcca ctgtgtgggt gtcccttagg aaactttcgc
1651 ccggctactc tctcacttca gaaagcgtgt ttaagctctt tacagatggc
1701 aatgctgccg tgcttattta tcaacacgtc tcgaccggtg ttcaaccccg
1751 caataagatc actttcgatc tcgcctctgt tggtaccgaa attggtgata
1801 ttggtgatta tgccattatc gtttactcca aggacgatac actcgaggct
1851 gatgagatgg tgatccatgt agatgtagag catcagcgaa tcccttccgc
1901 atccgctctc ccggtctaga gttcaggtac cagtccgaag actttaaact
1951 actccccttg ctgcgggagc taagttggta gttacattac tctaaactgc
2001 ctgaagacgc taaacggagt tttctccggc gtacgggttg tccatccagc
2051 tagcggctaa aatggtcagt ctcacccgta aggtgggcca agtctttaca
2101 aaggcttgag gtactctata ctatctactc cggatagttg tgaagggccg
2151 cgtacaatgt acgcactcag cccgggtacc ccctctatga gggctccata
2201 ggagacca