Sequence of DPV Horsegram yellow mosaic virus
Horsegram yellow mosaic virus segment DNA-A complete sequence, isolate horse gram
ACC No: AM932427
Dated: 2009-01-13 | Length: 2735 | CRC: -183109133
ID AM932427; SV 1; circular; genomic DNA; STD; VRL; 2735 BP.
XX
AC AM932427;
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DT 13-JAN-2009 (Rel. 99, Created)
DT 13-JAN-2009 (Rel. 99, Last updated, Version 1)
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DE Horsegram yellow mosaic virus segment DNA-A complete sequence, isolate
DE horse gram
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KW complete genome; complete viral segment.
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OS Horsegram yellow mosaic virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2735
RA Maruthi M.N.;
RT ;
RL Submitted (11-JAN-2008) to the EMBL/GenBank/DDBJ databases.
RL Maruthi M.N., Natural Resources Institute, University of Greenwich, Central
RL Avenue, Chatham Maritime, Kent, ME4 4TB, UNITED KINGDOM.
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RN [2]
RA Maruthi M.N.;
RT "Diversity and infectivity of horse gram yellow mosaic virus";
RL Unpublished.
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FH Key Location/Qualifiers
FH
FT source 1. .2735
FT /organism="Horsegram yellow mosaic virus"
FT /segment="DNA-A"
FT /host="Vigna unguiculata"
FT /isolate="horse gram"
FT /mol_type="genomic DNA"
FT /country="India:Bangalore"
FT /isolation_source="Vigna unguiculata leaf"
FT /collected_by="V Muniyappa"
FT /db_xref="taxon:263793"
FT CDS 145. .495
FT /gene="AV2"
FT /product="AV2 protein"
FT /protein_id="CAP69630.1"
FT /translation="MWDPLLNDFPKTVHGFRCMLAIKYLQQVQENYSTNSVGFLYITEL
FT IQVLRIRKHAKAELRYRLLYPGIQCSSETDLRHPPGATCFCGKCSCQREKTSVDQPSHV
FT EETEILSVVSLS"
FT CDS 305. .1078
FT /gene="AV1"
FT /product="coat protein"
FT /function="coat of the virus"
FT /protein_id="CAP69631.1"
FT /translation="MPKRNYDTAFSTPGSSVRRRLTYDTPLALPASAGSAPASVRRRRW
FT TNRPMWRKPRFYRLYRSPDVPRGCEGPCKVQSFEARHDISHVGKVICVTDVTRGSGLTH
FT RVGKRFCVKSIFITGKIWMDENIKTKNHTNTVMFKLVRDRRPFGTPQDFGQVFNMYDNE
FT PSTATVKNDLRDRYQVVRKFHATVTGGQYACKEQAIISRFYRVNNHVVYNHQEAAKYDN
FT HTENALLLYMACTHASNPVYATLKIRIYFYDSISN"
FT CDS complement(1075. .1479)
FT /gene="AC3"
FT /product="replication enhancer protein"
FT /protein_id="CAP69632.1"
FT /translation="MDLRTGDNITAAQLRSGVYIWEVRNPLSFKILQHRPMGAGSRMTV
FT TQIRLMFNHGLKKALQMHKCFLDLKLYHYMTATSGMILSIFRNQLFRYLNNLGVISLGN
FT VLNGASHILYEKLHLVEDVSFTHNVQYKLY"
FT CDS complement(1220. .1627)
FT /gene="AC2"
FT /product="transcriptional activator protein"
FT /protein_id="CAP69633.1"
FT /translation="MRNSTPSKNHSSPPSIKAQHRVAKKRAIRRSRIDLTCGCSYYIHI
FT NCRNYGFTHRGQHHCSSTQEWRLYLGGAKSPLFQDPSTSSNGSRVPNDRDPNPPNVQPR
FT TEESIADAQMLPRPEAVPLYDGDFWDDIINF"
FT CDS complement(1527. .2615)
FT /gene="AC1"
FT /product="Replication-associated protein"
FT /protein_id="CAP69634.1"
FT /translation="MPRERRFAINAKNYFLTYPRCPLTKEDTLEQLLALSTPVNKKFIR
FT ICRELHENGEPHLHVLLQFEGKFHTRNQRFFDLVSSTRSTHFHPNIQTAQSCSDVKQYM
FT EKDGDVLDHGTFQIDGRSARGGKQSANDAYAEALNCGSKSQALDILKEKAPKDYILQFH
FT NLNCNLTKIFISPIQAYVSPYSLDTFNRVPEYISSWASENVRDSAARPERPISIVIGGD
FT SRTGKTMWARALGPHNYLCGHLDLNDKIFSNEAWYNVIDDVDPHYLKHFKEFMGAQRDW
FT QSNIKYGKPTHIKGGIPTIFLCNPGPKSSYKEYLDEADNASLKVWASKNAEFYTLKEPL
FT FSSVDQSATQGCQEASNSTLSN"
FT CDS complement(2165. .2458)
FT /gene="AC4"
FT /product="AC4 protein"
FT /protein_id="CAP69635.1"
FT /translation="MENLISMFCCNSKANSTHVTKGSSTWYPQPGQHISIRTFRQLKAA
FT QMLSNTWRKTETSLIMEPSKSMEDRLEEVNSLQTTRMPRHSTVDPNHRPSIY"
XX
SQ Sequence 2735 BP; 701 A; 586 C; 622 G; 826 T; 0 other;
am932427 Length: 2735 13-JAN-2009 Type: N Check: 2709 ..
1 acctgagtgc cccgcgatcg gttccactct gcttttgctt ttgtaccgct
51 ttacttttag tcgttcaatg agaagcgctc ctcaccacta cgataattca
101 aatttgaatt ataaagctaa tggccacgtt gcatcgcact aaccatgtgg
151 gatccattgt tgaacgactt tcccaaaaca gtgcatggtt tccgatgtat
201 gcttgcaatt aagtacttgc agcaagtcca agagaattat tccactaatt
251 ctgttggttt tttgtatatc acagagctaa tacaggtatt acgcattcgg
301 aaacatgcca aagcggaact acgataccgc cttctctacc ccgggatcca
351 gtgttcgtcg gagactgacc tacgacaccc ccctggcgct acctgcttct
401 gcgggaagtg ctcctgccag cgtgagaaga cgtcggtgga ccaaccgtcc
451 catgtggagg aaaccgagat tttatcggtt gtatcgctct cctgatgtcc
501 cacgtggttg tgaaggaccg tgtaaggtcc aatcatttga ggcgagacat
551 gacatctcgc atgtgggcaa agtcatttgt gtcacggatg tgactcgtgg
601 tagtggtctc actcatcgtg tcggtaaacg attttgtgtt aagtccatct
651 tcattacggg aaagatttgg atggacgaaa acatcaagac caagaatcac
701 actaacactg tgatgttcaa attggttcgt gataggcgtc cttttggaac
751 gccccaggac tttggtcaag ttttcaacat gtatgataat gaacccagta
801 ctgccactgt gaagaacgat cttcgtgatc gttatcaggt cgtgcgtaag
851 tttcatgcca ccgtgactgg tggccagtat gcgtgcaagg agcaagctat
901 aattagccga ttttatcgtg ttaataatca tgttgtttac aaccatcagg
951 aagctgcgaa gtatgacaat catactgaga acgctttgtt attgtatatg
1001 gcatgtactc atgcttctaa tcctgtgtat gcaacgctta agattcggat
1051 ctatttttac gattcgatat caaattaata aagcttgtat tgaacattat
1101 gcgtaaagct tacatcctcc accaggtgga gtttttcata caggatatgt
1151 gaggcgccat ttaatacatt gcctaagcta atgacgccta aattatttaa
1201 atatctaaat aattggttcc taaaaattga taatatcatc ccagaagtcg
1251 ccgtcatata gtggtacagc ttcaggtcga ggaagcattt gtgcatctgc
1301 aatgctttct tcagtccgtg gttgaacatt aggcggattt gggtcacggt
1351 cattcgggac cctgctccca ttggacgatg ttgaaggatc ttgaaagaga
1401 ggggatttcg cacctcccag atatagacgc cactcctgag ttgagctgca
1451 gtgatgttgt ccccggtgcg taaatccata gttgcgacag ttgatgtgaa
1501 tgtagtagct acacccacag gttaagtcaa ttcgagagcg tcgaattgct
1551 cgcttcttgg caaccctgtg ttgcgctttg atcgacggag gagaagagtg
1601 gttctttgag ggtgtagaat tccgcatttt ttgaagccca cacctttagc
1651 gacgcattat cagcttcgtc caagtactct ttataggagg atttgggacc
1701 tgggttacag agaaagatgg tggggattcc acctttaatg tgtgtgggct
1751 ttccgtattt tatatttgac tgccagtctc tttgcgcgcc catgaattct
1801 ttgaaatgtt tcaaataatg tggatcaacg tcatcgatga cgttatacca
1851 tgcctcgtta gagaaaatct tatcgttcag atccaagtgg ccgcaaagat
1901 aattatgagg acccaatgct cttgcccaca tggttttacc cgtccgacta
1951 tcacctccaa tcactatact tatgggtctc tccggccgcg cagcggaatc
2001 ccttacattt tctgaagccc atgaagaaat atattctgga actctattaa
2051 atgtatctaa actataaggc gacacatatg cctgaatagg cgaaatgaaa
2101 atcttagtca aattacaatt taaattatga aattgtaaaa tataatcctt
2151 tggagccttc tctttcaata tatcgagggc ctgtgatttg gatccacagt
2201 tgagtgcctc ggcatacgcg tcgtttgcag actgtttacc tcctctagcc
2251 gatcttccat cgatttggaa ggttccatga tcaaggacgt ctccgtcttt
2301 ctccatgtat tgcttaacat ctgagcagct ttgagctgtc tgaatgttcg
2351 gatggaaatg tgttgacctg gttgaggata ccaggtcgaa gaacctttgg
2401 ttacgtgtgt ggaatttgcc ttcgaattgc agcagaacat ggagatgagg
2451 ttctccattc tcgtggagct ctcggcagat gcgaatgaat tttttgttaa
2501 ctggtgttga caaagctaat agttgctcca gtgtgtcctc tttagttaga
2551 ggacagcgag gatatgtaag gaaatagttt ttagcgttta tagcaaaacg
2601 acgctctctt ggcattttta aagtcgtttt tgtatcggtt gtccaccgat
2651 tctcatttac tcctgtcaat cggtgaatgg tgacgcatat atagtagagc
2701 tactaatccc ccaaggggca ctcagcaata atatt