Sequence of DPV Tomato mottle leaf curl virus
Tomato mottle leaf curl virus isolate RN-Mo1 replication-associated protein (AC1) gene, partial cds; putative AC4 protein (AC4) gene, complete cds; and capsid protein (AV1) gene, partial cds.
ACC No: AY049227
Dated: 2005-04-16 | Length: 1185 | CRC: -5345186
!!NA_SEQUENCE 1.0
ID AY049227 standard; genomic DNA; VRL; 1185 BP.
XX
AC AY049227;
XX
SV AY049227.1
XX
DT 06-MAR-2002 (Rel. 71, Created)
DT 16-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE Tomato mottle leaf curl virus isolate RN-Mo1 replication-associated protein
DE (AC1) gene, partial cds; putative AC4 protein (AC4) gene, complete cds; and
DE capsid protein (AV1) gene, partial cds.
XX
KW .
XX
OS Tomato mottle leaf curl virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-1185
RX DOI; 10.1007/s00705-002-0917-0.
RX MEDLINE; 22444046.
RX PUBMED; 12556993.
RA Ribeiro S.G., Ambrozevicius L.P., Avila A.C., Bezerra I.C., Calegario R.F.,
RA Fernandes J.J., Lima M.F., de Mello R.N., Rocha H., Zerbini F.M.;
RT "Distribution and genetic diversity of tomato-infecting begomoviruses in
RT Brazil";
RL Arch. Virol. 148(2):281-295(2003).
XX
RN [2]
RP 1-1185
RA Ribeiro S.G., Ambrozevicius L.P., de Avila A.C., Calegario R.F.,
RA Fernandes J.J., Lima M.F., Mello R.N., Rocha H., Zerbini F.M.;
RT ;
RL Submitted (31-JUL-2001) to the EMBL/GenBank/DDBJ databases.
RL Departamento de Fitopatologia, Universidade Federal de Vicosa, Av. P.H.
RL Rolfs s/n, Vicosa, MG 36571-000, Brazil
XX
FH Key Location/Qualifiers
FH
FT source 1. .1185
FT /db_xref="taxon:172394"
FT /mol_type="genomic DNA"
FT /note="acronym: TMoLCV"
FT /organism="Tomato mottle leaf curl virus"
FT /isolate="RN-Mo1"
FT CDS complement(<1. .695)
FT /codon_start=1
FT /db_xref="GOA:Q8QPQ1"
FT /db_xref="HSSP:1L5I"
FT /db_xref="InterPro:IPR001191"
FT /db_xref="InterPro:IPR001301"
FT /db_xref="UniProt/TrEMBL:Q8QPQ1"
FT /note="Rep"
FT /gene="AC1"
FT /product="replication-associated protein"
FT /protein_id="AAL82890.1"
FT /translation="MPLPKQFRINAKNYFLTYPKCSLNKEEALSQLLAIQTPTTKLFIR
FT VSRELHEDGNLHLHVLIQFEGKFQCKNNRFFDLISPTRSAHFHPNIQGAKSSSDVKSYV
FT EKDGDFIDHGVFQIDGRSARGGQQSANDTYAKVLNAGSVMEALNILREEQPKDFVLQQH
FT NIRSNLERIFQRAPEPWVPPFPLSSFTEVPEEMQEWADDYFGRDPAARPERPISIIIEG
FT DSRTGKTMWA"
FT CDS complement(245. .538)
FT /codon_start=1
FT /db_xref="InterPro:IPR002488"
FT /db_xref="UniProt/TrEMBL:Q8QPQ0"
FT /gene="AC4"
FT /product="putative AC4 protein"
FT /protein_id="AAL82891.1"
FT /translation="MGTFISTCSSSSKGNSSARTTDSLTSYPQPDQHISIRTFRELRAL
FT QMSNHTWRKTETSLIMEFSRSTADQLEEVSNLPTTRMPRSSMQDPSWRPSIY"
FT CDS 1043. .>1185
FT /codon_start=1
FT /db_xref="GOA:Q8QPP9"
FT /db_xref="InterPro:IPR000650"
FT /db_xref="UniProt/TrEMBL:Q8QPP9"
FT /note="CP"
FT /gene="AV1"
FT /product="capsid protein"
FT /protein_id="AAL82889.1"
FT /translation="MPKRDAPWRSMAGTSKVSRSANFSPRGGIGSKSDKAQAWVNRPMY
FT RKP"
XX
SQ Sequence 1185 BP; 287 A; 264 C; 281 G; 353 T; 0 other;
AY049227 Length: 1185 April 19, 2005 08:57 Type: N Check: 7016 ..
1 gcccacatcg tcttcccagt tctcgaatca ccctcgatga ttatactaat
51 aggtctctcc ggccgcgcag cgggatccct accaaaataa tcatcagccc
101 actcttgcat ctcctccgga acctcagtaa aggaggagag tggaaacgga
151 ggaacccatg gttccggagc cctttgaaag atacgttcta aattagaacg
201 tatgttgtgt tgttgaagga cgaagtcctt cggttgctcc tccctcaata
251 tattgagggc ctccatgacg gatcctgcat tgaggacctt ggcatacgtg
301 tcgttggcag attgctgacc tcctctagct gatctgccgt cgatctggaa
351 aactccatga tcaatgaagt ctccgtcttt ctccacgtat gatttgacat
401 ctgaagagct cttagctccc tgaatgttcg gatggaaatg tgctgatctg
451 gttggggata tgaggtcaaa gaatctgttg ttcttgcact ggaatttccc
501 ttcgaactgg atgagcacgt ggagatgaag gttcccatct tcgtgtaatt
551 ctctggatac acgaatgaat aatttggttg ttggggtttg gatggctagc
601 aattgggaaa gtgcttcttc tttgtttaaa gagcatttgg gatatgttag
651 gaaataattt ttcgcattta ttctgaattg tttagggagt ggcatttttg
701 taaataagac ttgggcaccg attggggtct cgcctaaagt ctgctatgta
751 attggtgtct ggtgtctcat ttatactaga agcctctata gaactatcaa
801 tcctcatcgc acacgtggcg gccatccgta taatattacc ggatggccgc
851 gcgggttttt tgccccgctc cgtgaatcac gtttttgtct tttactgtgt
901 ggtccagtca ctaaatgaca aatatgaccg tccaatcaga agtggtcctc
951 aaagcctaat tatttaaaaa tacttggtca ctaagtttgg aaaagtgtat
1001 aaatggtccc tccttgtatt gttataccat ctttaattca taatgcctaa
1051 gcgtgatgcc ccatggcgtt caatggcggg gacctcaaag gttagtcgct
1101 ccgccaattt ctcacctcgt ggaggaattg ggtcgaaatc agacaaggcc
1151 caggcctggg ttaacaggcc catgtacaga aagcc