Sequence of DPV Cymbidium mosaic virus

Cymbidium mosaic virus coat protein mRNA, complete cds.

ACC No: AY049769

Dated: 2005-04-16 | Length: 672 | CRC: -194797326

                !!NA_SEQUENCE 1.0
ID   AY049769   standard; mRNA; VRL; 672 BP.
XX
AC   AY049769;
XX
SV   AY049769.1
XX
DT   31-DEC-2004 (Rel. 82, Created)
DT   16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Cymbidium mosaic virus coat protein mRNA, complete cds.
XX
KW   .
XX
OS   Cymbidium mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC   Potexvirus.
XX
RN   [1]
RP   1-672
RA   Ajjikuttira P., Loh C.S., Wong S.M.;
RT   "Variability of coat protein gene of Cymbidium mosaic virus";
RL   Unpublished.
XX
RN   [2]
RP   1-672
RA   Ajjikuttira P., Loh C.S., Wong S.M.;
RT   ;
RL   Submitted (02-AUG-2001) to the EMBL/GenBank/DDBJ databases.
RL   Biological Sciences, National University of Singapore, Block S2, 14 Science
RL   Drive 4 117543, Singapore
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /country="Singapore"
FT                   /db_xref="taxon:12178"
FT                   /mol_type="mRNA"
FT                   /organism="Cymbidium mosaic virus"
FT                   /specific_host="Renanthera"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /db_xref="GOA:Q5JCN4"
FT                   /db_xref="InterPro:IPR000052"
FT                   /db_xref="UniProt/TrEMBL:Q5JCN4"
FT                   /note="viral encapsidation"
FT                   /product="coat protein"
FT                   /protein_id="AAL12213.1"
FT                   /translation="MGEPTPTPAATYSAADPTSAPKLADLAAIKYSPVTSSIATPEEIK
FT                   AITQLWVNNLGLPADTVGTAAIDLARAYADVGASKSATLLGFCPTKPDVRRAALAAQIF
FT                   VANVTPRQFCAYYAKVVWNLMLATNDPPANWAKAGFQEDTRFAAFDFFDAVDSTAALEP
FT                   AEWQRRPTDRERAAHSIGKYGALARQRIQNGNLITNIAEVTKGHLPSTNTLYAVPAPPT
FT                   E"
XX
SQ   Sequence 672 BP; 130 A; 242 C; 158 G; 142 T; 0 other;

 AY049769  Length: 672  April 19, 2005 08:51  Type: N  Check: 3234  ..

       1  atgggagagc ccactccaac tccagctgcc acttactctg ctgccgaccc
      51  cacttctgca cccaagttgg ccgacctggc tgccattaag tactcacctg
     101  tcacctcctc catcgccact cccgaagaaa taaaggccat aacccaattg
     151  tgggttaaca accttggcct ccccgctgac accgtaggta ccgcggccat
     201  tgacctggcc cgcgcctatg ctgacgtcgg ggcgtccaag agtgctaccc
     251  tgctcggttt ctgccctacg aaacctgatg tccgtcgcgc cgctcttgcc
     301  gcgcagatct tcgtggccaa cgtcaccccc cgccagtttt gcgcttacta
     351  cgcaaaagtg gtgtggaatc tgatgctggc cactaacgat ccgcccgcca
     401  actgggccaa ggctggtttc caggaggata cccggtttgc cgcctttgac
     451  ttcttcgatg ccgttgattc cactgccgcg ctggagcccg ctgaatggca
     501  gcgccgccct actgaccgtg aacgtgctgc gcactcgatc gggaagtacg
     551  gcgcccttgc ccgtcagcgt atccaaaacg gcaaccttat caccaacatt
     601  gccgaggtca ccaagggcca tcttccctcc accaacactc tctatgctgt
     651  gcctgcaccc cctactgaat aa