Sequence of DPV Botrytis virus X
Botrytis virus X, complete genome.
ACC No: AY055762
Dated: 2006-03-08 | Length: 6966 | CRC: -1529283993
ID AY055762 standard; genomic RNA; VRL; 6966 BP.
XX
AC AY055762;
XX
SV AY055762.1
XX
DT 08-OCT-2003 (Rel. 77, Created)
DT 08-MAR-2006 (Rel. 87, Last updated, Version 2)
XX
DE Botrytis virus X, complete genome.
XX
KW .
XX
OS Botrytis virus X
OC Viruses; ssRNA positive-strand viruses, no DNA stage.
XX
RN [1]
RP 1-6966
RX PUBMED; 16172841.
RA Howitt R.L., Beever R.E., Pearson M.N., Forster R.L.;
RT "Genome characterization of a flexuous rod-shaped mycovirus, Botrytis virus
RT X, reveals high amino acid identity to genes from plant 'potex-like'
RT viruses";
RL Arch. Virol. 151(3):563-579(2006).
XX
RN [2]
RP 1-6966
RA Howitt R.L., Beever R.E., Pearson M.N., Forster R.L.;
RT ;
RL Submitted (12-SEP-2001) to the EMBL/GenBank/DDBJ databases.
RL HortResearch, 120 Mt Albert Rd, Mt Albert, Auckland, New Zealand
XX
FH Key Location/Qualifiers
FH
FT source 1. .6966
FT /organism="Botrytis virus X"
FT /specific_host="Botrytis cinerea"
FT /mol_type="genomic RNA"
FT /virion
FT /db_xref="taxon:174142"
FT CDS 96. .4337
FT /codon_start=1
FT /product="158kDa replicase"
FT /db_xref="GOA:Q6YNQ7"
FT /db_xref="InterPro:IPR000606"
FT /db_xref="InterPro:IPR001788"
FT /db_xref="InterPro:IPR007094"
FT /db_xref="InterPro:IPR007095"
FT /db_xref="UniProtKB/TrEMBL:Q6YNQ7"
FT /protein_id="AAL17722.1"
FT /translation="MSALRSLASDLSDPTTKAAANEIAFKHFSDGIKSTKLSFPYKVDE
FT STAILLEKEGVLTNPFSTTLHTHAAEKMLENRTLNEVGKKLKVHTGPFTFIQFKTGKLG
FT HVGRGHNQGDQIINYAREAKDLSRFETLDTAVVPPVHNRVALLHDTLHFLSPRQLAQLF
FT HHNPNLHLLYATLVLPVEALHNLPSLNPHAYTLEYFSNGDFAYMPGGHAGSGYYHSAET
FT LHWLRAGQIKLGHFSLSLNKEDSFGAHHIFTVTRQFIPPAPRYLYAETELVTLHDIFYP
FT ADSNVQRPYPATLINRMELYCRSVKAVSLRDIFAKFRQVTETAQLRHMRISDVIRLANY
FT FLFSASLSGTNDYPSLVGHGLFKKMRVSFQERVKEVLAPLVGHTQYRTLMSFVQPKPFT
FT FSLTPVTFHAAQGRKWSNPLGPMDPPPPGPAGPDEPSDPLIGPTLSLLALGIPDDDLDA
FT DLDKIAKRNTRKDELLAELTQTPTKVEVPPAPEDAAGPQNPTTTTPTAADPPTTPADEP
FT TPEAPKHHPTLTAVDIQLLNDLRFTDLDIQHGIDGPILPLHRNPAELTPTLIADINCAP
FT FVEMLSARHIPIISRPVNNARAHALASDVKNAKIGKLLTKQPQDWLKSWDARCSTSELQ
FT LNVAVIHGAGGSGKSYSIQETLRNKRETLEHTTIVTPTVELRNDWSGKIPRMAPDRIKT
FT YEKAMLQPGTATVILDDYGKLPPGYLDSYAVLHPNVELFILTGDHRQTTYHVSDPEANT
FT FHLTSEIQEFRPLCAYYINATHRQPRRLANVLGTHSSKTSGGAVLEADMIPDDATVLVP
FT SRVEQAKLIDLNRRAMTYAGCQGLTAKNVTIVLDRDTPLCTDETMYTALSRASESITFV
FT NTYSKEPGFLAKLDCAPYLKTMLTGVHEEEYQPDDTPANDNPTEPELTKTHLPVENDNV
FT FFEPLVEQCTDKDTRELFTAEHGKTNLAQTSSLEVQLFPHQQAKDDALMTETMKARITT
FT STRDANLRELHDTNALSGLLFEFYADFMKVPKDPMPFNPTLWAESRARAERTYLSKTAA
FT QILNGANRQDPDFPDNFVALFLKSQWVKKLEKVGMQFKAGQTISSFKQQVVLLTTTLAL
FT YLRACRNSHQPDNVFIMCEKTSNQFNDFVKDWNFERDNYTSDYTQYDKSQDGLFLNFEL
FT RKARHFGVPQAVLDAYTAIKTDAKVFADTLKIMRLSGEGPTFDANTECNIAYDAARFQL
FT SDVKACYAGDDLARDRNCPERASWKYISHQFTLQAKPLVTRKPDFCGWSLTKHGIVKNP
FT KQLWQSMQLGLKLDKLKDIVPSYSLDFHHAYALGDKVYDIFTEEEMAYHQATVRLMHKM
FT GVHPKIAGDHLPVFHITSDRLLKETKPIPALVPTISITPPATPPPEAEVELTTFTTHIP
FT DSRPIRNVHFD"
FT CDS 4355. .5191
FT /codon_start=1
FT /product="30kDa protein"
FT /db_xref="UniProtKB/TrEMBL:Q6YNQ6"
FT /protein_id="AAL17723.1"
FT /translation="MSVTPDPTVGQALHPFSVPPTPAELDHIAAFYNVHPTPPLIGFSL
FT IGSVNIRPGGTSQRLTGIFDATPNSLPDAVASLSAHNFHHLLDWHHSIDPAHIAAAPHP
FT HTPAIKAALQRLTLIPNVIIYAPPTPSPPPPPAPTQPTRPTPGPAFFPQPFKVELHHPT
FT PKTSSLPAPSLPTSLPPIITNQYLRLQISTPTGARQTYLRALIPKSPDLTDFILRIDLT
FT EYHAHLIFTAELTRDHSITLARGPYVWPTFLPPSINNLIKLTHAAAEPSLQLTEIS"
FT CDS 5198. .6400
FT /codon_start=1
FT /product="coat protein"
FT /db_xref="GOA:Q6YNQ5"
FT /db_xref="InterPro:IPR000052"
FT /db_xref="UniProtKB/TrEMBL:Q6YNQ5"
FT /protein_id="AAL17724.1"
FT /translation="MDPNLDQDTLPTHEEIDNDVDSAEEEPPEPPLLPDDIDDDDSHGS
FT RTRRQVKPPPELLRAVGACLISGHYDGGNYFRWQQSIAALYAKAGYAGDIRFHQAAIQE
FT YALDPVLPAPRVSYDLLVAHAGLRYQALLNEQLRTGKTPPADEALKDAVRKAAQAAYDN
FT AVKTGDYTPLIDIAFKGVDINKHASDVAQLAKMSVTMDGTHIKFTAGEMPKDKVITSNS
FT MASPNTVMNILNLITTSANVTAVTCGIEFAIACAHQGSSRYTRHTGTSTGGSTFELIAA
FT HVKEHCTIRQFCSYFAKVVWNHLLTHATPPVNWAKHGFTLDSRYAAFDFFDAVTNAAAL
FT PPKNGLIRAPTSEEIRAHNLNAHLLINASRQDDQVSSSAQYTAAIAQAGGFKRPQIGWG
FT E"
FT misc_feature 5831. .6400
FT /note="alternative start codon; contains shortened coat
FT protein"
FT CDS 6279. .6677
FT /codon_start=1
FT /product="14kDa protein"
FT /db_xref="UniProtKB/TrEMBL:Q6YNQ4"
FT /protein_id="AAL17725.1"
FT /translation="MPTYSSMLHAKMIKSPAALNTPQPSPKQAVSNAHRLDGGSSYVVS
FT LSEISSCPTSTTNSLFAAATPSTLLLSALYCTPPSQLRMKSSCTLTLFIPPLNTAASPT
FT LPDTSCHGEWNTTTRPCLAASTALMYSL"
FT CDS 6431. .6817
FT /codon_start=1
FT /product="14kDa protein"
FT /db_xref="UniProtKB/TrEMBL:Q6YNQ3"
FT /protein_id="AAL17726.1"
FT /translation="MSDFNDELVIRCGDTVYSPIVCSVLHPTISAKDEIVMHVDVIHSP
FT PKYRGFANSTRHIMPWRMEHNHKTMSSGLHCTDVLAVEKEALPGAIATFFSSLKTPINI
FT TFPDKVHVTREPLKPNDNAHIDEA"
XX
SQ Sequence 6966 BP; 1813 A; 2517 C; 1288 G; 1348 T; 0 other;
ay055762 Length: 6966 08-MAR-2006 Type: N Check: 9730 ..
1 gaaaaccaca tcgcaaatcc ccgcaccagc catagccaca agccagtatt
51 ctgccacgcc ccaccccacg gaggctgtcc ttttaccttg tcgctatgtc
101 tgcactccgc tctctcgcct ctgacttgtc agaccccaca acaaaagccg
151 ctgccaacga aatagctttc aaacacttct ccgacggtat caaatccact
201 aaattatcct tcccctacaa agtcgacgaa tccactgcca tcctcctgga
251 gaaagaaggc gtactcacca acccattctc caccaccctt catacgcatg
301 ccgctgagaa gatgctggaa aatcgcaccc tcaatgaagt tggaaagaaa
351 ctgaaagtgc acacgggacc cttcacgttc atccagttca aaacgggcaa
401 gctcggacac gtcggcagag gccacaacca aggagaccaa atcattaact
451 acgcacgcga ggccaaggac ctctcccgat ttgaaaccct tgacacagcc
501 gtcgtccccc ccgttcataa cagagtggcg ctccttcacg acacccttca
551 ctttctcagc ccaaggcaac tcgctcaact cttccaccac aacccaaacc
601 tccacctact ctatgcgacc ctggttctcc ccgtggaagc cctccacaat
651 ctcccttccc ttaaccccca cgcctacacg ctcgaatact tcagcaatgg
701 cgacttcgct tacatgcccg gaggtcacgc tggctcagga tactaccaca
751 gcgctgaaac cctccattgg cttcgggcag gccagatcaa gttaggccac
801 ttctcccttt ctctcaacaa ggaagacagc ttcggagccc accatatatt
851 cactgtcaca agacagttca ttccccccgc cccccgctac ctctacgctg
901 aaaccgaact ggtcaccctg cacgacatct tttaccccgc cgactctaac
951 gttcagcggc cctaccctgc aacgttgatc aatcgcatgg aactctactg
1001 ccgctcagtc aaagccgtct cacttaggga catattcgca aaatttcgcc
1051 aggtcaccga aaccgcccaa ttaagacata tgcgcatctc tgacgtcata
1101 cgactagcca actatttcct tttcagcgcc tccctctccg gcaccaacga
1151 ctacccctca cttgttggcc acggactctt caagaagatg agggtctcct
1201 ttcaagaacg agtcaaggaa gtcctcgccc ccctcgtagg acatacacaa
1251 tatcgaaccc tcatgtcctt cgttcagccc aaacccttca ccttcagcct
1301 cacccctgtc actttccacg cagctcaagg gaggaaatgg agcaacccac
1351 tgggcccaat ggacccacca ccaccaggac ccgcaggccc tgatgaacct
1401 tccgaccctt tgatcggccc caccctctct ctccttgctc ttggaatacc
1451 cgacgacgac ctcgacgcag atctcgacaa aatcgccaaa cgcaacaccc
1501 ggaaagacga actcctcgct gagctcactc agacacccac caaggtggaa
1551 gtcccacccg cacccgagga cgccgctggg ccccagaacc ccaccaccac
1601 cacaccgacg gccgccgacc ctcctaccac acctgcggac gaacccacgc
1651 cggaggcgcc caaacaccac cccacactca ccgccgtcga catacaactt
1701 ctcaacgatc tccgcttcac ggatctcgac atccagcacg gcatagatgg
1751 acccatcctt cccttgcatc gcaaccccgc cgaactaaca ccgacgctca
1801 tcgccgacat taactgcgcc cccttcgtcg agatgctctc tgcgcgccat
1851 atcccaatca tctcaagacc ggtcaacaac gcacgagccc acgcactcgc
1901 ttcggacgtc aagaacgcaa agataggcaa actcctcact aagcaacccc
1951 aggactggct caaatcttgg gatgcccgtt gctccacctc agaactacaa
2001 ctcaacgtcg ccgtcatcca cggtgccggc ggcagcggca agtcctactc
2051 tattcaggag acgctacgca ataaaagaga aacgcttgag cacaccacca
2101 tcgtaacacc caccgtcgag ttgcgaaacg actggtctgg caagatcccc
2151 cgcatggctc cagaccgcat caagacctat gaaaaagcta tgctccaacc
2201 aggcaccgcc actgtcatac tggacgacta tggcaaactg ccacctggat
2251 acctcgactc ctacgccgtt ctccacccga acgtcgagct attcatactc
2301 acaggagacc acagacaaac cacctaccac gtctccgacc cagaagccaa
2351 cacattccat ctcacttccg agatccagga attccgaccc ctctgcgcct
2401 actatattaa cgccactcac cgacaacccc gtcgcctcgc caatgtactt
2451 ggtactcact catccaaaac ctcaggtgga gccgtgctag aggcagacat
2501 gattccagac gacgccaccg tccttgtgcc ttcaagagta gagcaggcca
2551 agcttataga cctcaacaga cgcgccatga catacgcagg gtgtcaagga
2601 ctaacagcca agaacgtcac catcgtccta gaccgagaca cccccctctg
2651 cacggatgaa accatgtaca ccgctctctc tcgggcgtct gaaagcatca
2701 ccttcgtcaa cacctactcc aaggaaccag gattcctcgc caagctggac
2751 tgcgccccat acctcaaaac tatgctcact ggagtgcacg aagaagagta
2801 ccaaccagac gacactcccg ccaacgacaa ccccacagag ccagagctca
2851 cgaaaactca ccttcccgtt gagaacgaca acgtcttctt cgaacccttg
2901 gtcgaacaat gcactgataa agacacccgt gagctcttca ccgccgaaca
2951 cggcaaaact aacctcgcgc aaaccagctc acttgaggta caactctttc
3001 cccaccaaca agccaaggat gacgccctca tgacggagac gatgaaggcc
3051 cgcatcacga ccagcacccg cgacgccaac ctacgcgagt tgcacgacac
3101 caacgcactt tccggtctgc tcttcgaatt ctacgctgat ttcatgaaag
3151 tcccaaaaga ccccatgccc tttaacccca ccctctgggc tgaaagtcgc
3201 gcccgcgctg aacgcaccta cctcagcaag acagccgctc aaatcctcaa
3251 cggtgccaat agacaggacc ccgacttccc tgacaacttc gtggccctct
3301 tcctcaagag tcaatgggtt aagaaacttg aaaaagtggg tatgcaattc
3351 aaagccgggc agacaatatc gtccttcaaa cagcaagtcg tgctgctcac
3401 cactacgctc gccttgtacc tcagagcctg ccgcaactcg catcaaccag
3451 acaacgtctt cataatgtgc gagaaaactt ccaaccaatt caatgatttc
3501 gtcaaggact ggaactttga acgcgacaat tacacgagcg attacacaca
3551 atacgacaaa tctcaagacg gacttttcct caactttgag ctgcgcaaag
3601 ccagacactt cggcgtccca caagctgtcc tagacgccta cacagccatc
3651 aaaacggacg ccaaagtctt tgccgacacc ctcaaaataa tgcgactaag
3701 cggggaagga cccaccttcg acgccaacac tgagtgcaac atcgcttacg
3751 acgcagcccg ctttcaactt tctgacgtca aggcctgcta cgctggagat
3801 gacctcgcac gcgaccgcaa ctgccccgag cgcgcttctt ggaaatacat
3851 cagccaccaa ttcacactcc aggccaaacc actcgtcact cgcaaacccg
3901 atttctgcgg ctggtcgctc acaaaacacg gaatcgtcaa gaacccaaaa
3951 caactctggc agtccatgca actgggactt aaactcgaca agctcaaaga
4001 catcgtcccc tcttactcac ttgacttcca ccacgcctac gcactcggag
4051 acaaagtcta tgacatcttc actgaagagg aaatggccta ccaccaagcc
4101 accgtgcgcc tcatgcacaa gatgggagtc cacccaaaaa tcgccggaga
4151 ccacctacca gtcttccaca tcacttccga ccgcctgctc aaggaaacga
4201 agccaatacc agcccttgtg ccgacaattt ctataacccc gcccgccacg
4251 ccacccccgg aggcagaagt ggaactcaca accttcacca ctcacattcc
4301 agattctaga cctattagga atgtgcattt tgattaagtt tgtggttctt
4351 tgaaatgtcc gtcacgcctg atccgacagt aggacaagct ttacacccct
4401 tctccgtccc tcccaccccc gccgaactcg atcacatcgc tgctttctac
4451 aacgttcacc ccaccccacc tctcattgga ttcagcctca ttggaagtgt
4501 caatatccga cctggcggca cgtcgcaacg cctcactggc attttcgacg
4551 ccacaccaaa ctccctgccc gacgctgttg cctcgctctc tgcccacaat
4601 ttccaccacc tccttgactg gcaccactcc attgaccctg cccacatcgc
4651 cgctgcaccg catccacata cccctgccat taaagcagcc ctccaacgct
4701 tgacgctcat cccgaacgtc atcatctacg ctccccccac ccccagccct
4751 ccccccccac cggcacccac ccagcccact cgacctaccc cgggacccgc
4801 attctttccc caacccttca aggttgagtt acaccatccc acccctaaaa
4851 cctcctcact acccgcacct tccctaccca cctctcttcc tcccatcatc
4901 accaaccagt atctccgtct ccaaatttcc acccccactg gagcacgaca
4951 gacttatctc agagccctaa tcccaaagtc ccctgatctt acagacttca
5001 tcctcaggat agacctcact gaatatcacg cacacctcat attcaccgcc
5051 gaactcacgc gcgaccattc catcactctc gcaagaggtc cctacgtttg
5101 gcccactttc ctgccccctt ccatcaacaa cctcattaaa ctcacacacg
5151 ctgctgctga accttcactt caactaactg agattagtta agttgttatg
5201 gatccgaatt tagatcagga caccctccca actcacgaag aaattgacaa
5251 cgacgtcgac tccgccgaag aagaaccacc tgagcccccc ctactccccg
5301 acgatataga cgacgacgat tcccacggat ctcgcacccg gcgccaggta
5351 aagcctccac ctgaacttct ccgcgccgta ggagcttgcc tcatcagcgg
5401 acactacgac ggagggaact acttccgttg gcagcaaagc atcgcagcac
5451 tctacgccaa ggcaggatac gccggcgaca tccgattcca tcaagccgca
5501 atccaggaat acgcactcga ccccgtactc ccagccccgc gcgttagcta
5551 cgatctccta gtcgcccacg caggtctccg ctaccaagcc ctgctcaacg
5601 aacaactacg tacaggaaaa accccccccg ccgacgaagc cctcaaagac
5651 gccgtacgca aagctgccca ggccgcatac gacaacgccg tcaagacagg
5701 tgattacacc cccctcatcg acatagcatt caaaggagtt gacatcaaca
5751 aacacgcgtc agacgtcgcg caactcgcca agatgagtgt cacaatggat
5801 ggaacgcata tcaaattcac cgccggagaa atgcccaagg ataaagtcat
5851 caccagcaat tcgatggcca gcccaaacac cgtcatgaac atcctcaacc
5901 tcatcaccac tagcgccaat gtcaccgccg tcacctgtgg aattgagttc
5951 gcaatcgcct gcgctcacca aggctcctcc cgatacaccc gtcacacggg
6001 cacgtccaca ggaggatcga cattcgaact catcgccgcc cacgtcaagg
6051 aacactgcac catcagacag ttctgctcct acttcgctaa agtcgtctgg
6101 aaccaccttc tgacccacgc aacacccccg gtcaactggg ccaaacacgg
6151 cttcactctg gacagtcgct acgccgcatt tgacttcttt gacgctgtca
6201 ccaacgccgc cgccctacca cccaagaatg gactcattcg cgcccccacc
6251 tctgaggaaa ttcgcgctca caatctgaat gcccacttac tcatcaatgc
6301 ttcacgccaa gatgatcaag tctccagcag cgctcaatac accgcagcca
6351 tcgcccaagc aggcggtttc aaacgcccac agattggatg gggggagtag
6401 ttatgttgtt tctttatctg aaatatcatc atgtccgact tcaacgacga
6451 actcgttatt cgctgcggcg acaccgtcta ctctcctatt gtctgctctg
6501 tattgcaccc caccatctca gctaaggatg aaatcgtcat gcacgttgac
6551 gttattcatt ccccccctaa ataccgcggc ttcgccaact ctacccgaca
6601 catcatgcca tggagaatgg aacacaacca caagaccatg tctagcggcc
6651 tccactgcac tgatgtactc gctgtagaaa aggaggcctt accaggcgca
6701 attgctactt tctttagctc tcttaaaaca cctatcaata ttaccttccc
6751 agacaaggtt catgttaccc gcgaaccttt gaaacccaat gacaatgccc
6801 atattgatga ggcttaattt atttctttac ttattttctc ttttggagtt
6851 catttcgagg ggctagctta gcctagtcat gtgtttgccc tcacaccatc
6901 cgaccaaagt acaggtcaat tccgcacgcc tatcttaaca ggctatggat
6951 ttttgtccca tgcgac