Sequence of DPV Potato leafroll virus

Potato leafroll virus isolate Fujian coat protein (cp) gene, partial cds.

ACC No: AY079210

Dated: 2006-11-14 | Length: 617 | CRC: -927500679

                
ID   AY079210; SV 1; linear; genomic RNA; STD; VRL; 617 BP.
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AC   AY079210;
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DT   19-MAR-2002 (Rel. 71, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 2)
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DE   Potato leafroll virus isolate Fujian coat protein (cp) gene, partial cds.
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KW   .
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OS   Potato leafroll virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Luteoviridae;
OC   Polerovirus.
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RN   [1]
RP   1-617
RA   Wu X., Xie L., Wu Z.;
RT   ;
RL   Submitted (19-FEB-2002) to the EMBL/GenBank/DDBJ databases.
RL   The Plant Virology Institute, Fujian Agricultural and Forestry University,
RL   Fuzhou, Fujian 350002, China
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FH   Key             Location/Qualifiers
FH
FT   source          1. .617
FT                   /organism="Potato leafroll virus"
FT                   /specific_host="Solanum tuberosum"
FT                   /isolate="Fujian"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /db_xref="taxon:12045"
FT   CDS             1. .>617
FT                   /codon_start=1
FT                   /gene="cp"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q8QP41"
FT                   /db_xref="InterPro:IPR001517"
FT                   /db_xref="UniProtKB/TrEMBL:Q8QP41"
FT                   /protein_id="AAL87540.1"
FT                   /translation="MSTVVVTGNVNGGVQQPRRRRRQSLRKRANRVQPVVMVTTPGQPR
FT                   RRRRRRGGNRRSRRTGVPRGRGSSETFVFTKDNLMGNSQGSFTFGPSLSDCPAFKDGIL
FT                   KAYHEYKITSILLQFVSEASSTSSGSIAYELDPHCKVSSLQSYVNKFQITKGGAKTYQA
FT                   RMINGVEWHDSSEDQCRILWKGNGKSSDTAGSFRVTIRVALQ"
FT   variation       20
FT                   /gene="cp"
FT                   /replace="a"
FT                   /note="in other isolates"
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SQ   Sequence 617 BP; 174 A; 156 C; 161 G; 126 T; 0 other;

ay079210 Length: 617  14-NOV-2006  Type: N  Check: 3453  ..

       1  atgagtacgg tcgtggttac aggaaatgtc aatggtggtg tacaacaacc
      51  aagaaggcga agaaggcaat cccttcgcaa gcgcgctaac agagttcagc
     101  cagtggttat ggtcacgacc cctgggcaac ccaggcgccg aagacgtaga
     151  agaggaggca atcgccgctc aagaagaact ggagttcccc gaggacgagg
     201  ctcaagcgag acattcgtgt ttacaaagga caacctcatg ggcaactccc
     251  aaggaagttt caccttcggg ccgagtctat cagactgtcc ggcattcaag
     301  gatggaatac tcaaggccta ccatgagtat aagatcacaa gcatcttact
     351  tcagttcgtc agcgaggcct cttccacctc ctccggctcc atcgcttatg
     401  agttggaccc ccattgcaaa gtgtcatccc ttcagtccta cgtcaacaag
     451  ttccaaatta cgaagggcgg cgccaaaact tatcaagcgc ggatgataaa
     501  cggggtagaa tggcacgatt cttctgagga tcagtgccgg atactgtgga
     551  agggaaatgg aaaatcttca gataccgcag gatccttcag agtcaccatt
     601  agggtggctt tgcaaaa