Sequence of DPV Guanarito virus
Guanarito virus strain INH-95551 segment S, complete sequence.
ACC No: AY129247
Dated: 2003-05-29 | Length: 3343 | CRC: 1743289971
!!NA_SEQUENCE 1.0
ID AY129247 standard; genomic RNA; VRL; 3343 BP.
XX
AC AY129247;
XX
SV AY129247.1
XX
DT 26-SEP-2002 (Rel. 73, Created)
DT 29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE Guanarito virus strain INH-95551 segment S, complete sequence.
XX
KW .
XX
OS Guanarito virus
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC New world arenaviruses.
XX
RN [1]
RP 1-3343
RX MEDLINE; 22197098.
RX PUBMED; 12207889.
RA Charrel R., Feldmann H., Fulhorst C., Khelifa R., Chesse R.,
RA Lamballerie X.;
RT "Phylogeny of New World arenaviruses based on the complete coding sequences
RT of the small genomic segment identified an evolutionary lineage produced by
RT intrasegmental recombination";
RL Biochem. Biophys. Res. Commun. 296(5):1118-1124(2002).
XX
RN [2]
RP 1-3343
RA Charrel R.N., Feldmann H., Khelifa R., de Lamballerie X.;
RT ;
RL Submitted (05-JUL-2002) to the EMBL/GenBank/DDBJ databases.
RL Unite des Virus Emergents, Universite de la Mediterranee, 27 Blvd Jean
RL Moulin, Marseille 13005, France
XX
DR GOA; Q8AZ66.
DR SPTREMBL; Q8AYW1; Q8AYW1.
DR SPTREMBL; Q8AZ66; Q8AZ66.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3343
FT /db_xref="taxon:45219"
FT /mol_type="genomic RNA"
FT /organism="Guanarito virus"
FT /strain="INH-95551"
FT /segment="S"
FT CDS 74. .1513
FT /codon_start=1
FT /db_xref="SPTREMBL:Q8AYW1"
FT /product="glycoprotein precursor"
FT /protein_id="AAN05423.1"
FT /translation="MGQLISFFQDIPIFFEEALNVALAVVTLLAIIKGIVNVWKSGILQ
FT LFVFLVLAGRSCSFKVGHHTNFESFTVKLGGVFHELPSLCRVNNSYSLIRLSHNSNQAL
FT SVEYVDVHPVLCSSSPTILDNYTQCIKGSPEFDWILGWTIKGLGHDFLRDPRICCEPKK
FT TTNAEFTFQLNLTDSPETHHYRSKIEVGIRHLFGNYITNDSYSKMSVVMRNTTWEGQCS
FT NSHVNTLRFLVKNAGYLVGRKPLAFFSWSLSDPKGNDMPGGYCLERWMLVAGDLKCFGN
FT TAVAKCNLNHDSEFCDMLRLFDFNKNAIEKLNNQTKTAVNMLTHSINSLISDNLLMRNK
FT LKEILKVPYCNYTRFWYINHTKSGEHSLPRCWLVSNGSYLNESDFRNEWILESDHLIAE
FT MLSKEYQDRQGKTPLTLVDLCFWSAIFFTTSLFLHLVGFPTHRHIQGDPCPLPHRLDRN
FT GACRCGRFQKLGKQVTWKRKH"
FT CDS complement(1609. .3291)
FT /codon_start=1
FT /db_xref="GOA:Q8AZ66"
FT /db_xref="SPTREMBL:Q8AZ66"
FT /product="nucleocapsid protein"
FT /protein_id="AAN05424.1"
FT /translation="MAHSKEIPSFRWTQSLRRELGMFTEPTKSSVLNDAKLIADSLDFT
FT QVSQVQRLLRKSKRGDTDLDKLRDLNKEVDRLMSMKSVQNNTVLKVGDLGKDELMDLAS
FT DLEKLKKKIGDRESNSPRMYMGNLTQSQLEKRAGILRTLGFQQQRGAAGGVVRLWDVSD
FT PSKLNNQFGSMPALTIACMTVQGGETMNNVVQALTSLGLLYTVKYPNLDDLEKLTLEHD
FT CLQIITKDESALNISGYNFSLSAAVKAGASLIDGGNMLETIKVTPNNFSSIVKAALNVK
FT RREGMFIDERPGNRNPYENLLYKLCLSGEGWPYIGSRSQILGRSWDNTSVDLNARPVTG
FT PRAPEKNGQNIRLSNLSEMQEAIVKEAMRKLDSSDTIWMDIEGPPTDPVELAVFQPSSG
FT NYVHCFRKPHDEKGFKNGSRHSHGILLKDLEDAQPGLLSYVIGLLPQGSVITVQGADDI
FT KKLFDIHGRKDLKLVDVRLTGEQSRIFEQEVWEKFGHLCRAHNGVIVPKKKNKEANSTK
FT EPHCALLDCIMFQSVLDGHLPDTIPIQLLPNTLVFQAKSAFVM"
XX
SQ Sequence 3343 BP; 889 A; 704 C; 724 G; 1026 T; 0 other;
AY129247 Length: 3343 December 5, 2003 15:01 Type: N Check: 2889 ..
1 cgcacagtgg atcctaggcg tttttactca cgcaataatt tgtccacact
51 attgttgggt gtgacctagc ataatgggac agttaatcag tttctttcag
101 gacataccga tcttctttga agaagcactc aatgtagcct tggctgtggt
151 tacactgctt gctattataa agggcattgt gaatgtttgg aaatcaggaa
201 ttcttcagct gtttgtgttc ttggttctgg cgggaaggtc atgctctttc
251 aaagttggtc atcatacaaa ttttgagtca tttacagtta agctaggagg
301 tgtcttccat gaattacctt cactatgtag ggtcaacaac tcttacagtc
351 taattaggct ttctcataac agtaatcagg cattatcagt tgagtatgtg
401 gatgtgcacc ctgtcctctg ttcgtccagt ccaaccatac tcgacaacta
451 cactcaatgt ataaaaggct ctccagagtt tgattggatt cttgggtgga
501 caattaaggg attgggacat gactttttga gggatccaag aatctgctgt
551 gagcctaaaa agacaactaa tgctgaattt acattccaat tgaatttaac
601 agatagtcct gagacccatc actataggag caagattgag gtaggcatcc
651 gacatttatt cgggaactac ataactaatg atagctattc aaaaatgtct
701 gtggttatga ggaacactac ctgggaaggt caatgctcaa atagtcatgt
751 gaatacactg agatttcttg ttaaaaatgc aggttacctt gttggaagaa
801 aaccactggc attttttagt tggtcacttt ctgacccaaa gggtaatgac
851 atgccaggtg gttactgtct tgaaaggtgg atgttggttg ctggggattt
901 gaagtgcttt ggcaacacag ctgtcgccaa gtgtaatttg aatcatgatt
951 ctgagttctg tgacatgttg aggctgtttg atttcaataa gaatgccatt
1001 gaaaaactga acaaccaaac taaaactgct gtcaacatgt tgactcactc
1051 aataaatagt ctaatatctg ataatttatt gatgagaaac aaactgaagg
1101 agattttgaa ggtcccatat tgcaactaca caagattctg gtacataaac
1151 cacacgaaat ctggtgagca ctcactgcct cggtgttggc tggtcagtaa
1201 tggttcctat ttgaatgaga gtgattttag aaatgagtgg atcttggaga
1251 gtgatcacct aatagcagag atgttaagca aagaatacca agataggcag
1301 gggaagactc ccctaacact ggttgatcta tgtttctgga gtgcaatctt
1351 tttcaccaca agtctctttt tacacctggt tgggttccca acacatagac
1401 atatacaggg tgacccgtgc cctttgcctc acaggctcga tagaaatggt
1451 gcttgcaggt gtggcaggtt tcaaaaactt ggaaaacaag taacctggaa
1501 gagaaagcat tgatttcatc agccctccag ctctgtcggc ccggaaaccc
1551 gggccgacag agcgcccccc agtccgcggc aatgcccgcg gactgggagg
1601 gcatctgcct acatcacaaa tgcgctcttg gcttggaaca ctaatgtgtt
1651 tggtagcagt tgaatgggaa tggtgtcggg aagatgacca tcaagaacag
1701 actgaaacat gatgcaatcg agaagagcac agtgtggctc cttcgtggag
1751 ttagcctcct tgtttttctt cttaggaaca atgacaccat tgtgtgctct
1801 gcagaggtgg ccaaattttt cccaaacttc ctgttcaaaa attctggact
1851 gttccccagt cagtctgaca tcaacaagtt ttaaatcttt ccttccatgt
1901 atgtcgaaaa gctttttgat gtcatctgcc ccttgaacag tgataactga
1951 accctgtggc aataagccaa tgacgtaact caatagacca ggttgagcat
2001 cttcaaggtc ctttaatagt atgccgtgtg agtgcctact tccattttta
2051 aaacctttct catcatgagg ttttctgaaa cagtgtacat agtttcctga
2101 agaaggttgg aaaactgcca actccacagg atcagttggc gggccttcaa
2151 tgtccatcca gattgtgtct gatgaatcta atttcctcat tgcttccttt
2201 acgatcgctt cttgcatttc agaaagattt gatagtctga tattttgtcc
2251 attcttttca ggagctcggg gacctgttac aggtcttgca tttaaatcga
2301 cacttgtgtt gtcccaagac ctcccgagta tttgtgacct tgatccaata
2351 tatggccaac cctccccaga caaacacagc ttgtagagaa ggttctcata
2401 agggtttcta ttgcccggtc tctcatctat gaacatgcct tctcttcttt
2451 tgacgttcaa tgcggccttg acaatagaag agaagttgtt gggtgtgact
2501 tttattgtct ccagcatgtt gccaccatct ataagtgatg caccagcttt
2551 tacagcagct gaaagactga agttataacc agatatgttg agtgcactct
2601 catcctttgt tataatctgt aggcagtcgt gttctaaagt tagtttttcc
2651 aggtcatcaa gattgggata tttgacagtg tagagaagac caagtgatgt
2701 tagtgcctgc acaacattgt tcattgtttc tcctccctga actgtcatgc
2751 aggcaatggt aagagctggc attgaaccaa attggttatt cagtttggag
2801 ggatcagata catcccacaa cctgacaacc ccacctgcag cccccctttg
2851 ttgttggaat cccagggttc taagaatccc tgctcttttt tccaattgtg
2901 actgcgtcaa gtttcccatg tacatccttg gactattgct ttccctatct
2951 ccaatcttct tctttagttt ttctagatct gaggccaagt ccattaattc
3001 atctttgccc aaatcaccaa ctttcagaac tgtgttgttc tgaacacttt
3051 tcatgctcat cagtctatca acttctttat ttaagtccct aagtttatca
3101 agatcagtgt ctcctcgttt ggacttacgt aggagtcttt gaacttgaga
3151 aacttgtgtg aaatcaaggg agtctgcaat gagctttgca tcattaagaa
3201 cacttgattt ggttggttct gtgaacatcc ctagttctct ccttagagat
3251 tgagtccagc ggaagctggg gatttctttg gagtgagcca tagttcgcgt
3301 tgtgtagaag actaagacaa aaatgcctag gatcaccttg tgc