Sequence of DPV Rice stripe virus

Rice stripe virus isolate CX segment 4, complete sequence.

ACC No: AY185501

Dated: 2003-05-29 | Length: 2137 | CRC: 2083382983

                !!NA_SEQUENCE 1.0
ID   AY185501   standard; genomic RNA; VRL; 2137 BP.
XX
AC   AY185501;
XX
SV   AY185501.1
XX
DT   20-FEB-2003 (Rel. 74, Created)
DT   29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE   Rice stripe virus isolate CX segment 4, complete sequence.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-2137
RA   Wei T.Y., Lin H.X., Xie L.H.;
RT   ;
RL   Submitted (22-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection, The Institute of Plant, Jinshan, Fuzhou, Fujian 350002,
RL   China
XX
DR   SPTREMBL; O10389; O10389.
DR   SPTREMBL; Q80A48; Q80A48.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .2137
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Rice stripe virus"
FT                   /isolate="CX"
FT                   /segment="4"
FT   CDS             55. .591
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:O10389"
FT                   /note="disease-specific protein; putative pathogenicity
FT                   protein"
FT                   /product="SP protein"
FT                   /protein_id="AAO40773.1"
FT                   /translation="MQDVQRTIEVSVGPIVGLDYTLLYDTLPETVSDNITLPDLKDPER
FT                   VTEDTKKLILKGCVYIAYHHPLETDTLFIKVHKHIPEFCHSFLSHLLGGEDDDNALIDI
FT                   GLFFNILQPSLGGWITKNFLRHPNRMSKDQIKMLLDQIIKMAKAESSDTEEYEKVWKKM
FT                   PTYFESIIQPLLHKT"
FT   CDS             complement(1226. .2086)
FT                   /codon_start=1
FT                   /db_xref="SPTREMBL:Q80A48"
FT                   /note="putative 30 kDa movement protein"
FT                   /product="NSVC4 protein"
FT                   /protein_id="AAO40774.1"
FT                   /translation="MALSRLLSTSKSKVLYDDLSEESQKRVDNKNRKSLALSKRPLNQG
FT                   RVTIDQAATMLGLEPFSFSDVKVNKYDMFIAKQDYSVKAHRKATFNILVDPYWFHQPLT
FT                   HYPFFRVATFAMVWIGIKGRASGITTLRIIDKSYVNPSDQVEVEVRYPISKNFAVLGSL
FT                   ANFLALEDKHNLQVSVSVDDSSVQNCVISRTLWFWGIERTDLPVSMKTSDTVMFEFEPL
FT                   EDKAINHLSSFSNFTTNVVQKAVGGAFTSKSFPELDTEKEFGVVKQPKKIPITRKSKSE
FT                   VSVIM"
XX
SQ   Sequence 2137 BP; 683 A; 451 C; 400 G; 603 T; 0 other;

AY185501  Length: 2137  September 11, 2003 13:48  Type: N  Check: 3737  ..

       1  acacaaagtc cagggcattt gtacaacgat ccagcaattt aatcagaatc
      51  gaagatgcaa gacgtacaaa ggacaataga agtttctgtt ggtcctattg
     101  taggcctaga ttacactctg ttgtatgaca ctctgcccga gactgtgagc
     151  gataatatta ctctacctga tttgaaagat ccagagagag tcacggaaga
     201  tactaagaag ctaatactca aaggctgtgt ttatatagca tatcatcacc
     251  ccttggagac tgacactctc ttcattaaag ttcacaagca tataccagag
     301  ttttgtcact ccttcctatc acaccttcta ggaggtgaag atgatgacaa
     351  tgctctgata gacattggcc tgttcttcaa catcttgcaa ccctctctgg
     401  gcggttggat aaccaagaat tttcttagac acccaaacag gatgtctaag
     451  gaccaaatta aaatgctcct ggatcagatt ataaagatgg ctaaggccga
     501  gagctcagac acagaagagt atgagaaagt gtggaagaag atgccaactt
     551  attttgagtc aataatccaa cctcttctac acaaaacata gtttattgca
     601  tatcacactt tccacccacg agtgcttgca ttctagaagt ggagccagtt
     651  tgggttgacc ttcttgtatg aaaatacaag tatattatag tctaaacaat
     701  atacatgatg tttgtttact taagcttaac agtttgtaaa taattgtgtg
     751  tgattgagcg tgtgtgtata tatgtattaa tatataactg tacacaggtg
     801  tgcagatgca aacacctgaa acaaataaac aaatatatac ctatcaaatc
     851  atatacatgc ttgtgagtct tggctcctct acatacacac atacaagaac
     901  cattgctaaa atactaataa ctttgctttt acaatatcaa aaccacaaac
     951  tgaaatacca aaaacatgag aaaatagaaa atcaaaaaca atgaatggtg
    1001  ctaagcacca catccggatg tggcgtagca ccattttcat aacattagtc
    1051  tataacctac ttgtggcaaa aacacccata tgcatgaagt gcatagcact
    1101  ctcttatgga ttgaccacta taattacgtg aatgcatagc attctcttga
    1151  aaaaagcaaa gcagaacaga ccacatcaag tgcgtagcac tagatgctag
    1201  catactctgg aactggatat ctcacctaca tgatgacaga aacttcagat
    1251  tttgatttcc tcgtaatggg tatcttcttt ggctgcttca ccacaccgaa
    1301  ctccttttca gtgtctagct cagggaagct cttgctggta aatgcacctc
    1351  caacagcttt ctgaacaaca ttagttgtga aattgctgaa gctagacaaa
    1401  tgatttattg ccttatcttc tagtggttca aattcaaaca tcacagtgtc
    1451  actggtcttc atggacactg gcagatcagt cctttcaatc ccccagaacc
    1501  aaagagttct agagatgaca cagttctgca ctgagctgtc atcaacagac
    1551  acggacacct gaagattatg cttatcctcc aaagccagaa agtttgctag
    1601  agaacccaag acagcaaagt tcttgctaat tgggtagcga acttctacct
    1651  caacttgatc tgaggggttc acataagact tatctataat gcggagggta
    1701  gtaattccac tggctctacc ctttatccca atccagacca tagcaaatgt
    1751  tgctactctg aaaaatggat aatgggtgag aggttgatga aaccaatatg
    1801  gatcaacaag tatgttgaaa gttgctttcc tatgggcctt cacagaatag
    1851  tcctgtttag ctatgaacat atcatacttg ttcaccttga catctgagaa
    1901  gctgaagggt tccaatccga gcattgtggc agcctggtca atcgtgaccc
    1951  tgccttggtt cagaggcctc ttggagagag ctagagattt cctattctta
    2001  ttatcaactc tcttttgaga ctcctcacta aggtcgtcat agagtacctt
    2051  actttttgaa gtggacaaga gtcgagacaa agccataatt aaagtatata
    2101  ttagcttaat ctcaaaagat atgccctgac tttgtgt