Sequence of DPV Rice stripe virus
Rice stripe virus isolate CX segment 2 gene, complete sequence.
ACC No: AY186790
Dated: 2003-05-29 | Length: 3505 | CRC: 777225428
!!NA_SEQUENCE 1.0
ID AY186790 standard; genomic RNA; VRL; 3505 BP.
XX
AC AY186790;
XX
SV AY186790.1
XX
DT 04-FEB-2003 (Rel. 74, Created)
DT 29-MAY-2003 (Rel. 75, Last updated, Version 2)
XX
DE Rice stripe virus isolate CX segment 2 gene, complete sequence.
XX
KW .
XX
OS Rice stripe virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN [1]
RP 1-3505
RA Wei T.Y., Lin H.X., Xie L.H.;
RT ;
RL Submitted (23-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL Plant Protection, The Institute of Plant, Jinshan, Fuzhou, Fujian 350002,
RL China
XX
DR SPTREMBL; Q80A72; Q80A72.
DR SPTREMBL; Q80A73; Q80A73.
XX
FH Key Location/Qualifiers
FH
FT source 1. .3505
FT /db_xref="taxon:12331"
FT /mol_type="genomic RNA"
FT /virion
FT /organism="Rice stripe virus"
FT /isolate="CX"
FT /segment="2"
FT CDS 81. .680
FT /codon_start=1
FT /db_xref="SPTREMBL:Q80A73"
FT /note="putative movement protein"
FT /product="NS2 protein"
FT /protein_id="AAO31608.1"
FT /translation="MALLLFNDHYYGFLHKYKRHTGSYDNLFNLRCSKEDYYLNSLDAI
FT WLMGCCEEFTDPALRAHALAIATESNIGLVNNNAVISDERLKCWLCKKPSHQQTEHLKL
FT ILLPNLVNGFQFATESYHICLKDHSGDDPTQYLSEFSFPTGLRAYYKPHQKMEHKHIVV
FT TNGIPISKNFNEIALPETSLSDDYVLVGAHECPILM"
FT CDS complement(971. .3475)
FT /codon_start=1
FT /db_xref="SPTREMBL:Q80A72"
FT /note="membrane glycoprotein"
FT /product="NSvc2 protein"
FT /protein_id="AAO31609.1"
FT /translation="MHFKSYFIYTTIFNMAWGAPIPFPDTHSWMRNRDREPSEIVKVPC
FT SASPPPCKLTYELNGYCIENGLICYNRAXVNYFETCFTGNYDYKGPVHPSFSKFGGHVY
FT LSCDDAILHNVLLVGIQQPEYTSSPLLITNSNSEKISYSNLKTGYLGIVYAVETRACIQ
FT PDQAKKPEEIINHGVAIKPSCTDGVLYYINSACEVNVSDQTFSIPSCESAKLPTYDDTI
FT EVCDKGGCQNVICHPGQICDKYERMDMIMRIKNYQCSHIYRYSLYSIILFFVIVVVFTL
FT ITIMNILFFLKPAFWLLKKVLYSMVGLCHRRPVVDEVSVDMSTVRVVDEAEEGLLVVED
FT SIAPNTNVSDKVKRKGRKVENGLIFIPYILMILLLVCSAESCQDLVSSISNIERCTNNS
FT CDFISKMKLTLLNTPQDFCFKTSTDVYKIRFNSVRVMCLSVPLYYTNSFKRVISREEWK
FT CFEGEGCRTDGTHSIWGESTSLSFDYCVTDFHIFSYCPAYHYNWKRIEYEPTSSRACTI
FT MKCMDTKFEIVGYIQKNGHVLKELGGITSKYDSPLVSISLSNYNSARMPREYAECDGKA
FT YLRTANDLGSFDKELLGNIQCPTKDDAVVLSSKCKTKILSNEDLPVIRYIERDGVDMLE
FT HVKSEPLKDVLVSSSGISLGTLDLFPVELNLQFKEAITSIITSKISLNGTSCKITGIEG
FT KFKKTTVSIESSNKVYLSDILACEGLAVCPMILNNIKKGTCITTTYYSVSVGSMIKCKF
FT IYSGDTIMCKYNVSPLEITVISPSLDVSSFEAVKASTTNWMELLAGIVKDNPKLSLVAS
FT IIPIGLILKTIRSFLDDIRQVD"
XX
SQ Sequence 3505 BP; 1065 A; 738 C; 640 G; 1061 T; 1 other;
AY186790 Length: 3505 September 11, 2003 13:48 Type: N Check: 1824 ..
1 acacaaagtc ctgggtatat aagccacata tatcatataa atctaacaga
51 aatcgtccac ggagaatctc gtcttcagca atggcattac ttcttttcaa
101 tgatcactac tatggttttc tccataaata taaaaggcat actggatcat
151 atgataatct cttcaatttg aggtgctcta aagaagacta ctatttgaac
201 tctcttgatg ctatctggct catgggatgc tgtgaggagt ttacagaccc
251 agctcttaga gcacatgctc tcgccatagc aactgaatca aacataggtt
301 tggttaacaa caatgctgtg atatctgatg agaggctgaa gtgctggctc
351 tgtaaaaaac catctcatca acagactgag catctgaaac tgattctgtt
401 gcccaacttg gtcaatgggt ttcagtttgc aacagagtca tatcacatat
451 gcctgaagga tcactctgga gatgacccca cgcaatatct tagtgaattc
501 tcttttccca caggattaag agcctactac aagccacatc agaagatgga
551 gcacaagcac atagttgtaa ccaatggaat acccatctca aagaatttca
601 atgaaattgc tctccctgaa acatctctta gtgatgacta tgtcttggtt
651 ggagcacatg agtgtcctat tctaatgtga cttggaagat gatattgact
701 gtggcctaca ggcacataca cacactggcc acgaacacta caatggtgct
751 atgcatcaat ctataatctt atatcctcga aatggtgcta cgcaccacat
801 ccggatggtg agcctagcac actttgagta ctgagtaaaa aacaaacaag
851 tataatagta acaataatag ctttcttatt attatgtgat caagacacta
901 aaaactacac acttaagctt aagggaagat tattaataga aatatgggta
951 tacatggtga acctattggc ttaatcaacc tgtctgatgt catctagaaa
1001 actcctaatg gtctttaaaa tgagtcctat tggtattatt gaggccacta
1051 gagacaactt tgggttatcc ttgactatcc cagctaataa ctccatccaa
1101 ttggttgtgc tggccttcac agcctcaaaa gagctcacat ctaagctcgg
1151 tgatatcacg gtgatctcta atggtgaaac attatacttg cacataatgg
1201 tatcaccaga gtatatgaat ttgcatttga tcatggaacc aactgagaca
1251 gaatagtaag ttgttgttat gcatgtacct tttttgatgt tgttcagtat
1301 catcgggcaa accgccaatc cctcgcaagc caagatatca ctgagataga
1351 ctttgtttga agattctata ctaactgttg tcttcttaaa tttcccctct
1401 attccagtga tcttgcatga ggtcccattg agggatatct tactagttat
1451 tatgctagtg atagcctcct tgaactgcaa gttcagctcc actgggaata
1501 gatccaacgt gcctagagat ataccagagc tagagactaa cacatccttt
1551 aagggttcac tctttacatg ctctagcata tctactccat ccctctctat
1601 gtacctgata actggtaaat cctcatttga aagtatctta gttttacact
1651 tactgctaag aacaacagca tcgtctttag ttggacactg tatgttgcca
1701 agtaactcct tatcaaaaga tcctaaatca tttgctgttc ttaaataagc
1751 cttcccatcg cactctgcat attctctggg cattctggca ctattgtagt
1801 ttgacaacga tatagaaacc aaagggctat catacttact agtaatgcct
1851 cctaattctt ttaacacatg tccattcttc tgaatatacc caactatctc
1901 gaacttagta tccatgcatt tcataatggt gcatgctcta gaagatgttg
1951 gttcatattc tattctcttc caattgtagt ggtatgctgg gcaataggaa
2001 aagatgtgga aatcagtgac acaataatcg aagctcagac tagtggattc
2051 cccccatatt gagtgagttc catcagttct gcaaccttcc ccttcaaagc
2101 atttccattc ctctctagaa atcacccttt tgaaactgtt agtgtaatac
2151 agaggcactg ataagcacat tacacgaaca ctattgaatc gtatcttgta
2201 gacatcagtc gatgtcttga agcagaaatc ctgaggagtg tttagtaggg
2251 tcaatttcat tttagagatg aagtcacaac tattatttgt gcacctctct
2301 atgttagaaa tgcttgaaac aaggtcttga caggattctg cagaacaaac
2351 caatagcaag atcatcaata tatatggtat gaatatcaac ccattctcta
2401 cttttctacc cttccttttt actttgtcgg aaacattagt gttaggtgca
2451 atggagtctt ctacaactaa taggccttcc tctgcttcat ccactactct
2501 aactgttgac atatctacag atacttcatc tacaacaggt cttctgtggc
2551 atagtccaac cattgaatat aataccttct tcagcagcca aaatgcaggt
2601 tttaggaaaa ataagatatt cattatggtg atgagagtaa atactacaac
2651 tataacaaag aacaagatta tagagtacaa tgaatatcta tagatgtgag
2701 agcattgata attctttatc ctcattatca tgtccatcct ctcatacttg
2751 tcacaaatct gtcctgggtg acaaattaca ttttgacagc cacccttatc
2801 acaaacttca atagtatcat cataagttgg gagtttggct gattcacaag
2851 aagggataga gaatgtttgg tcactcacat tgacctcgca tgcagaattg
2901 atataatata gcacaccatc tgtgcaagag ggcttgattg caacaccatg
2951 atttatgatt tcttctggtt tcttagcttg gtcaggttga atgcatgccc
3001 tagtctcaac agcatacact attcccaagt aaccagtttt gagatttgag
3051 tatgaaatct tttcagaatt ggaattggtt atcaatagag ggcttgatgt
3101 gtattctggt tgctgtatgc cgaccagaag cacattatgc agtatagcat
3151 catcgcaact gagatatacg tgaccaccga acttagagaa agaaggatgg
3201 acaggcccct tgtaatcgta gtttccagtg aagcatgtct caaagtaatt
3251 cacacnagcc ctgttgtaac aaatcagacc attttcaatg caatatccat
3301 tcagctcata agtcaatttg cagggagggg gactggcact gcaagggacc
3351 ttgacaatct cagatggttc cctatccctg ttcctcatcc aagaatgggt
3401 gtcagggaaa ggtattggtg caccccacgc catattaaag atcgtggtgt
3451 agatgaaata tgatttaaaa tgcatcttca aagaagttat acccagactt
3501 tgtgt