Sequence of DPV Indian cassava mosaic virus

Indian cassava mosaic virus-[Lucknow] AV2 protein (AV2) gene, complete cds; and coat protein (AV1) gene, partial cds.

ACC No: AY188956

Dated: 2008-02-06 | Length: 492 | CRC: -1994725839

                
ID   AY188956; SV 2; linear; genomic DNA; STD; VRL; 492 BP.
XX
AC   AY188956;
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DT   05-FEB-2003 (Rel. 74, Created)
DT   06-FEB-2008 (Rel. 94, Last updated, Version 2)
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DE   Indian cassava mosaic virus-[Lucknow] AV2 protein (AV2) gene, complete cds;
DE   and coat protein (AV1) gene, partial cds.
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KW   .
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OS   Indian cassava mosaic virus-[Lucknow]
OC   Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN   [1]
RP   1-492
RA   Raj S.K., Chandra G., Singh R., Singh B.;
RT   "A geminivirus similar to Chilli leaf curl virus on Acalypha in India";
RL   Unpublished.
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RN   [2]
RP   1-492
RA   Raj S.K., Chandra G., Singh R., Singh B.;
RT   ;
RL   Submitted (29-NOV-2002) to the EMBL/GenBank/DDBJ databases.
RL   Plant Virology, National Botanical Research Institute, Rana Pratap Marg,
RL   Lucknow, U.P. 226001, India
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RN   [3]
RC   Sequence update by submitter
RP   1-492
RA   Raj S.K., Snehi S.K., Khan M.S., Kumar S.;
RT   ;
RL   Submitted (05-FEB-2008) to the EMBL/GenBank/DDBJ databases.
RL   Molecular Virology Lab, National Botanical Research Institute, Rana Pratap
RL   Marg, Lucknow, U.P. 226001, India
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CC   On Feb 5, 2008 this sequence version replaced gi:28207695.
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FH   Key             Location/Qualifiers
FH
FT   source          1. .492
FT                   /organism="Indian cassava mosaic virus-[Lucknow]"
FT                   /specific_host="Acalypha"
FT                   /mol_type="genomic DNA"
FT                   /isolation_source="Acalypha showing yellow mosaic"
FT                   /db_xref="taxon:500467"
FT   gene            136. .492
FT                   /gene="AV2"
FT   CDS             136. .492
FT                   /codon_start=1
FT                   /gene="AV2"
FT                   /product="AV2 protein"
FT                   /protein_id="ABZ04213.1"
FT                   /translation="MWDPLLNEFPESVHGFRCMLALKYLQLVESTYSPDTLGYDLIRDL
FT                   ILVIRARSYVEATSRYHHFNSRLESTSPSGVGQPVQQTPPRPHCPRHKKTSLDKQAHES
FT                   EAQVVQDVQKPRCS"
FT   gene            296. .>492
FT                   /gene="AV1"
FT   CDS             296. .>492
FT                   /codon_start=1
FT                   /gene="AV1"
FT                   /product="coat protein"
FT                   /protein_id="ABZ04214.1"
FT                   /translation="MSKRPADIIISTPGSKVRRRLGLGSPYSKRPPVPTVRVTKKQAWT
FT                   NRPMNRKPRWYRMFKSPDVP"
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SQ   Sequence 492 BP; 116 A; 143 C; 123 G; 110 T; 0 other;

ay188956 Length: 492  06-FEB-2008  Type: N  Check: 1346  ..

       1  accggatggc cgcgcccccc gctctgtggt ggaccccccc cacgtggaga
      51  tgtcccccac tcagaacgcg cgctcaaagc ttgaataatt gtggtccccg
     101  tttaagtact tggtaagcaa gttgtaatct gcacaatgtg ggaccctttg
     151  ttaaatgagt tccctgaatc cgttcacggt tttcggtgta tgctagcgct
     201  gaagtacctt cagctcgtgg aaagtactta ttcccccgat acgctcgggt
     251  acgatctaat ccgggacctg attttggtta tcagggccag aagctatgtc
     301  gaagcgacca gcagatatca tcatttcaac tccaggctcg aaagtacgtc
     351  gccgtctggg gttgggcagc ccgtacagca aacgcccccc cgtccccact
     401  gtccgcgtca caaaaaaaca agcctggaca aacaggccca tgaatcggaa
     451  gcccaggtgg tacaggatgt tcaaaagccc agatgttcct ag