Sequence of DPV Rice stripe virus

Rice stripe virus isolate CX3 coat protein gene, complete cds.

ACC No: AY284871

Dated: 2003-05-21 | Length: 969 | CRC: 1160585381

                !!NA_SEQUENCE 1.0
ID   AY284871   standard; RNA; VRL; 969 BP.
XX
AC   AY284871;
XX
SV   AY284871.1
XX
DT   21-MAY-2003 (Rel. 75, Created)
DT   21-MAY-2003 (Rel. 75, Last updated, Version 1)
XX
DE   Rice stripe virus isolate CX3 coat protein gene, complete cds.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-969
RA   Wei T., Lin H., Lin Q., Wu Z., Xie L.;
RT   "Molecular variability of coat protein genes of rice stripe virus in
RT   China";
RL   Unpublished.
XX
RN   [2]
RP   1-969
RA   Wei T., Lin H., Wu Z., Lin Q., Xie L.;
RT   ;
RL   Submitted (26-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection, Plant Virology, Jingshan, Fuzhou, Fujian 350002, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .969
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /organism="Rice stripe virus"
FT                   /isolate="CX3"
FT                   /segment="RNA3"
FT   CDS             complement(1. .969)
FT                   /codon_start=1
FT                   /note="CP; possible pathogenicity-related protein"
FT                   /product="coat protein"
FT                   /protein_id="AAP37578.1"
FT                   /translation="MGTNKPATLADLQKAINDISKDALNYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRAVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGSNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLPCDYV
FT                   PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLIDKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTK
FT                   LYLAQQSKLMKILAENTSKTATEVSGLVKDFFEDEAEGADD"
XX
SQ   Sequence 969 BP; 234 A; 248 C; 192 G; 295 T; 0 other;

  AY284871  Length: 969  May 28, 2003 14:33  Type: N  Check: 9704  ..

       1  ctagtcatct gcaccttctg cctcatcctc gaagaaatcc ttcaccaacc
      51  cgctgacttc tgttgctgtc tttgaagtgt tctcagcaag gatcttcatc
     101  agcttgctct gttgagccaa gtacagcttg gtctggtttc catatgtact
     151  gatcgtgttg acagacatac cagccagtgc atcgaagatt gtggtcttca
     201  ctttcccatt ggtgatgaat tcatctaaga ccttctttct accatcctcc
     251  ttcttcttgt caatcaagtt ctttgacttg catgttatga ccaggagacc
     301  agttgtgtac ttcatcatgt ctatgtcctt tgtcagacca cgctccttct
     351  tcttaccctc tggcatggtc tttttagtta tttggaagga gtgaatgatg
     401  tgcacaacaa acaagatgtg actaagagag tgtgttgtgc agtaaggagc
     451  tgtttcactc tccagtttga tgtattgtgg gacatagtca cacggtaggt
     501  tgtcacatcc tgtcagcccc agatcagaag agtccacagc catcttaaca
     551  ccagaaattt gtcgcacaac ttcatgtgag acatttggga atagctgagc
     601  taacctccca agtgtaatgg cattggcatt tgatcccaca gaggacacta
     651  tcccatacct tgacaccaag gttgaagcct cagtgcttcc agccgccact
     701  ttcactttct tggtgacagc tctcacaaag ccagtgcctc tcacatacct
     751  catggtgatg cacatagtca tatccttggc caatgtgtca ccacctttgt
     801  ccttcaatat gccaatcaga gttgcagcat catagcctgc atactctatc
     851  tgaccagcaa aagtcacaac atcagcttta tgagcagtca ggtaattcaa
     901  cgcatctttt gagatgtcat taattgcctt ctgcaaatca gctagagtgg
     951  ctggcttgtt ggtacccat