Sequence of DPV Rice stripe virus

Rice stripe virus isolate JN1 coat protein gene, complete cds.

ACC No: AY284872

Dated: 2003-05-21 | Length: 969 | CRC: -1893190191

                !!NA_SEQUENCE 1.0
ID   AY284872   standard; RNA; VRL; 969 BP.
XX
AC   AY284872;
XX
SV   AY284872.1
XX
DT   21-MAY-2003 (Rel. 75, Created)
DT   21-MAY-2003 (Rel. 75, Last updated, Version 1)
XX
DE   Rice stripe virus isolate JN1 coat protein gene, complete cds.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-969
RA   Wei T., Lin H., Lin Q., Wu Z., Xie L.;
RT   "Molecular variability of coat protein genes of rice stripe virus in
RT   China";
RL   Unpublished.
XX
RN   [2]
RP   1-969
RA   Wei T., Lin H., Wu Z., Lin Q., Xie L.;
RT   ;
RL   Submitted (26-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection, Plant Virology, Jingshan, Fuzhou, Fujian 350002, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .969
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /organism="Rice stripe virus"
FT                   /isolate="JN1"
FT                   /segment="RNA3"
FT   CDS             complement(1. .969)
FT                   /codon_start=1
FT                   /note="CP; possible pathogenicity-related protein"
FT                   /product="coat protein"
FT                   /protein_id="AAP37579.1"
FT                   /translation="MGTNKPATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT                   PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR
FT                   LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGADD"
XX
SQ   Sequence 969 BP; 230 A; 251 C; 196 G; 292 T; 0 other;

  AY284872  Length: 969  May 28, 2003 14:33  Type: N  Check: 9245  ..

       1  ctagtcatct gcaccttctg cctcgtcctc gaagaactcc ttcactaacc
      51  cgctgacttc agatgctgtc tttgaagtgt tctcagcaag gatcttcatc
     101  agtttgctct gttgagccaa gtacagcctt gtctgattcc cataagtgct
     151  gatagtattg acagacatac cagccagcgc atcgaagatt gtggtcttca
     201  ctttcccatt ggtgatgaat tcatctaaga ccttcttcct gccatcttcc
     251  ttcttcttgt cagccaggtt ctttgacttg catgtgatga ccaagagacc
     301  agttgtgtac ttcatcatgt ctatgtcttt tgtcagacca cgctccttct
     351  tcttaccttc tggcatggtc tttttggtta tctggaagga gtgaatgatg
     401  tgcacaacaa acaaaatgtg acttagggag tgagttgtgc agtaaggagc
     451  tgtttcactc tccagtttga tatattgtgg aacatagtcc cacagtaagt
     501  tgtcacatcc tgttagtccc aggtcagagg agtccacagc catcttaaca
     551  ccagaaattt gtctcacaac ttcatgtgag acatttggga atagctgagc
     601  cagccttcca agtgtgatag cattggcatt tgtccccacc gaggacacta
     651  tcccatacct cgacaccaag gtcgaagcct ctgtgcttcc agccgccact
     701  ttcactttct tagtgacatc tctcacaaag ccagtgcctc tcacatatct
     751  catggtgatg cacatagtca tatccttggc cagtgtgtca ccacctttgt
     801  ccttcaatat gccaatcaga gttgcagcat catagcctgc atactctatc
     851  tgaccagcaa aggtcacaac atcagcttta tgagcagtca ggtaagacaa
     901  cgcatctttg gagatgtcat tgattgcctt ctgcaaatca gctagagtgg
     951  ctggcttgtt ggtacccat