Sequence of DPV Rice stripe virus

Rice stripe virus isolate SHB NS3 gene, complete cds.

ACC No: AY284935

Dated: 2003-06-10 | Length: 636 | CRC: -49945448

                !!NA_SEQUENCE 1.0
ID   AY284935   standard; RNA; VRL; 636 BP.
XX
AC   AY284935;
XX
SV   AY284935.1
XX
DT   10-JUN-2003 (Rel. 76, Created)
DT   10-JUN-2003 (Rel. 76, Last updated, Version 1)
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DE   Rice stripe virus isolate SHB NS3 gene, complete cds.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-636
RA   Wang H., Wei T., Lin Q., Wu Z., Xie L.;
RT   "Analysis of genetic diversity of rice stripe virus in the NS3 gene";
RL   Unpublished.
XX
RN   [2]
RP   1-636
RA   Wang H., Wei T., Lin H., Wu Z., Lin Q., Xie L.;
RT   ;
RL   Submitted (28-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Fujian Agriculture and Forestry University, Plant Virology, Jinshan,
RL   Fuzhou, Fujian 350002, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .636
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /organism="Rice stripe virus"
FT                   /isolate="SHB"
FT                   /segment="RNA3"
FT   CDS             1. .636
FT                   /codon_start=1
FT                   /note="possible replication protein; possible suppressor of
FT                   gene silencing"
FT                   /product="NS3"
FT                   /protein_id="AAP49583.1"
FT                   /translation="MNVFTSSVGSVEFAHPLLLENDLTSLSINCEDVHCSSRALCYIYD
FT                   IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPAIMMSSSY
FT                   VKFFTEVKPRPPSTNCWTCRMSKDNLPFTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT                   RKTLYRSPSKKKHKYVISSDKPPLSARYVKYVDSSALGPSPGSSPAVL"
XX
SQ   Sequence 636 BP; 168 A; 149 C; 126 G; 193 T; 0 other;

  AY284935  Length: 636  June 17, 2003 10:39  Type: N  Check: 9696  ..

       1  atgaacgtgt tcacatcgtc tgtgggttct gtggaattcg ctcatcctct
      51  acttttggag aatgatctga ccagtttgag catcaactgt gaagatgtcc
     101  actgctcttc aagagcttta tgttatatat atgacatcca ttcatctagg
     151  cacccctcca ttgatgagca tcagtttctg aggcttctcc atggccctga
     201  tgatgctgtc actctaggct ctttcttgaa aactctgatc tggattctgt
     251  cccatgataa gaacctccca gaagagtaca gacttcctgc tataatgatg
     301  tcatcctctt atgtgaagtt cttcactgaa gtgaagccac gacccccatc
     351  aacaaattgc tggacatgca ggatgtctaa ggacaatttg ccctttaccg
     401  ttcctagtgt caagggattt cctccagatg ctgagcttta cattgtgcca
     451  atatctgacc atgatggaaa gcctgtcaaa tttgataata ggaagactct
     501  atatagatca cctagtaaga aaaagcataa gtatgtcatt tcttcagata
     551  aaccacctct tagtgcacgt tatgttaagt acgtagattc tagtgcacta
     601  ggaccatcac caggcagctc tccagctgtg ctgtag