Sequence of DPV Rice stripe virus

Rice stripe virus isolate JD NS3 gene, complete cds.

ACC No: AY284944

Dated: 2003-06-10 | Length: 636 | CRC: -2004689001

                !!NA_SEQUENCE 1.0
ID   AY284944   standard; RNA; VRL; 636 BP.
XX
AC   AY284944;
XX
SV   AY284944.1
XX
DT   10-JUN-2003 (Rel. 76, Created)
DT   10-JUN-2003 (Rel. 76, Last updated, Version 1)
XX
DE   Rice stripe virus isolate JD NS3 gene, complete cds.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-636
RA   Wang H., Wei T., Lin Q., Wu Z., Xie L.;
RT   "Analysis of genetic diversity of rice stripe virus in the NS3 gene";
RL   Unpublished.
XX
RN   [2]
RP   1-636
RA   Wang H., Wei T., Lin H., Wu Z., Lin Q., Xie L.;
RT   ;
RL   Submitted (28-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Fujian Agriculture and Forestry University, Plant Virology, Jinshan,
RL   Fuzhou, Fujian 350002, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .636
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /organism="Rice stripe virus"
FT                   /isolate="JD"
FT                   /segment="RNA3"
FT   CDS             1. .636
FT                   /codon_start=1
FT                   /note="possible replication protein; possible suppressor of
FT                   gene silencing"
FT                   /product="NS3"
FT                   /protein_id="AAP49591.1"
FT                   /translation="MAGVTSSVGSVEFAHPLLLENDLTSLSINCDDVHCSSRALCYIYD
FT                   IHSSRHPSIDEHQFLRLLHGPDDAVTLGSFLKTLIWILSHDKNLPEEYRLPTIMMSSSY
FT                   VKFFTEVKPRPPSTNCWTCRMSKDNLPLTVPSVKGFPPDAELYIVPISDHDGKPVKFDN
FT                   RKTLYRSPSKKRHKYVISSDKPPLSARYVKYVDSSALEPSPGSSPAVV"
XX
SQ   Sequence 636 BP; 169 A; 145 C; 125 G; 197 T; 0 other;

  AY284944  Length: 636  June 17, 2003 10:39  Type: N  Check: 1428  ..

       1  atggctggag tcacatcttc tgtgggttct gtggaatttg ctcatcctct
      51  gcttttggag aatgatctga ccagtttgag cataaactgt gatgatgtcc
     101  attgttcttc aagagcctta tgttatatat atgacattca ttcatctagg
     151  cacccttcca ttgatgagca tcagtttctg aggcttcttc atggccctga
     201  tgatgctgta actctaggct ccttcttgaa aactctgatc tggattctgt
     251  cccatgataa gaatctccca gaagagtaca gacttcctac tataatgatg
     301  tcatcctcat atgtgaagtt cttcactgaa gttaagccaa gacccccatc
     351  aactaattgc tggacatgca gaatgtccaa agacaatttg ccccttaccg
     401  ttcctagtgt caagggattt cctccagatg cagagctcta cattgtgcca
     451  atatctgacc atgatggaaa gcctgtcaaa tttgacaata ggaagactct
     501  atatagatca cctagtaaga aaaggcataa gtatgtcatt tcttctgata
     551  aaccacctct tagtgcacgt tatgttaagt acgttgattc tagtgcacta
     601  gaaccctcac caggcagctc tccagctgtg gtgtag