Sequence of DPV Rice stripe virus

Rice stripe virus isolate KM coat protein gene, complete cds.

ACC No: AY286106

Dated: 2003-05-21 | Length: 969 | CRC: -440154324

                !!NA_SEQUENCE 1.0
ID   AY286106   standard; RNA; VRL; 969 BP.
XX
AC   AY286106;
XX
SV   AY286106.1
XX
DT   21-MAY-2003 (Rel. 75, Created)
DT   21-MAY-2003 (Rel. 75, Last updated, Version 1)
XX
DE   Rice stripe virus isolate KM coat protein gene, complete cds.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-969
RA   Wei T., Lin H., Lin Q., Wu Z., Xie L.;
RT   "Molecular variability of coat protein genes of rice stripe virus in
RT   China";
RL   Unpublished.
XX
RN   [2]
RP   1-969
RA   Wei T., Lin H., Wu Z., Lin Q., Xie L.;
RT   ;
RL   Submitted (28-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection, Plant Virology, Jingshan, Fuzhou, Fujian 350002, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .969
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /organism="Rice stripe virus"
FT                   /isolate="KM"
FT                   /segment="RNA3"
FT   CDS             complement(1. .969)
FT                   /codon_start=1
FT                   /note="CP; possible pathogenicity related protein"
FT                   /product="coat protein"
FT                   /protein_id="AAP38193.1"
FT                   /translation="MGTNKPATLADLQKAINDISKDALNYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRAVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGSNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT                   PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLIDKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR
FT                   LYLAQQSKLMKILAENTSKTATEVSGLVKEFFEDEAERADD"
XX
SQ   Sequence 969 BP; 233 A; 250 C; 194 G; 292 T; 0 other;

  AY286106  Length: 969  May 28, 2003 14:33  Type: N  Check: 9168  ..

       1  ctagtcatct gcacgttctg cctcatcctc gaagaattcc ttcaccaacc
      51  cgctgacttc tgttgctgtc tttgaagtgt tctcagcaag gatcttcatc
     101  agcttactct gttgagccaa gtacagcctg gtctggttcc catatgtact
     151  gatcgtgttg acagacatac cagccagtgc atcgaagatt gtggtcttca
     201  ctttcccatt ggtgatgaat tcatctaaga ccttctttct accatcctcc
     251  ttcttcttgt caatcaagtt ctttgacttg catgtgatga ccaggagacc
     301  agttgtgtac ttcatcatgt ctatgtcctt tgtcagacca cgctccttct
     351  tcttaccctc tggcatggtc tttttagtta tttggaagga gtgaatgatg
     401  tgcacaacaa acaagatgtg actgagggag tgagttgtgc agtaaggagc
     451  tgtttcactc tccagtttga tgtattgtgg aacatagtcc cacagcaggt
     501  tgtcacatcc tgtcagcccc agatcagaag agtcaacagc catcttaaca
     551  ccagaaattt gtcgcacaac ttcatgtgag acatttggga atagctgagc
     601  caaccttcca agtgtgatgg cattggcatt tgatcccacc gaggacacta
     651  tcccatacct tgataccaag gttgaagcct cagtgcttcc agccgccact
     701  ttcactttct tggtgacagc tctcacaaag ccagtgcctc tcacatacct
     751  catggtgatg cacatagtca tatccttggc caatgtgtca ccacctttgt
     801  ccttcaatat gccaatcaga gttgcagcat catagcctgc atactctatc
     851  tgaccagcaa aagtcacaac atcagcttta tgagcagtca ggtaattcaa
     901  cgcatctttt gagatgtcat taattgcctt ctgcaaatca gctagagtgg
     951  ctggcttgtt ggtacccat