Sequence of DPV Rice stripe virus

Rice stripe virus isolate CX-2002 coat protein gene, complete cds.

ACC No: AY289040

Dated: 2003-06-03 | Length: 969 | CRC: 627050791

                !!NA_SEQUENCE 1.0
ID   AY289040   standard; RNA; VRL; 969 BP.
XX
AC   AY289040;
XX
SV   AY289040.1
XX
DT   03-JUN-2003 (Rel. 76, Created)
DT   03-JUN-2003 (Rel. 76, Last updated, Version 1)
XX
DE   Rice stripe virus isolate CX-2002 coat protein gene, complete cds.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-969
RA   Liao F., Wei T., Wu Z., Lin Q., Xie L.;
RT   "Molecular variability of rice stripe virus CP genes in China";
RL   Unpublished.
XX
RN   [2]
RP   1-969
RA   Liao F., Wei T., Wu Z., Lin Q., Xie L.;
RT   ;
RL   Submitted (28-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Fujian Agriculture and Forestry University, Plant Virology, Jiangshan,
RL   Fuzhou, Fujian 350002, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .969
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Rice stripe virus"
FT                   /isolate="CX-2002"
FT                   /segment="RNA3"
FT   CDS             complement(1. .969)
FT                   /codon_start=1
FT                   /note="CP; possible pathogenicity related protein"
FT                   /product="coat protein"
FT                   /protein_id="AAP44091.1"
FT                   /translation="MGTNKATTLADLQKAINDISKDALNYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGETLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGSNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT                   PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLIDKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR
FT                   LYLAQQSKLMKILAENTSKTATEVSGLVKEFFEDEAEGADD"
XX
SQ   Sequence 969 BP; 230 A; 250 C; 192 G; 297 T; 0 other;

  AY289040  Length: 969  June 10, 2003 09:42  Type: N  Check: 9701  ..

       1  ctagtcatct gcaccttctg cctcatcctc gaagaattcc ttcaccaacc
      51  cgctgacttc tgttgctgtc tttgaagtgt tctcagcaag gatcttcatc
     101  agcttactct gttgagccaa gtacagcctg gtctggttcc catatgtact
     151  gatcgtgttg acagacatac cagccagtgc atcgaagatt gtggtcttca
     201  ctttcccatt ggtgatgaat tcatccaaga ccttctttct accatcctcc
     251  ttcttcttgt caatcaagtt ctttgacttg catgtgatga ccaggagtcc
     301  agttgtgtac ttcatcatgt ctatgtcctt tgtcagacca cgctccttct
     351  tcttaccctc cggcatggtc tttttagtta tctggaagga gtgaatgatg
     401  tgcacaacaa ataagatgtg actgagggag tgagttgtgc agtaaggagc
     451  tgtttcactc tctagtttga tgtattgtgg aacatagtcc cacagcaggt
     501  tgtcacatcc tgtcagcccc agatcagaag agtcaacagc catcttaaca
     551  ccagaaattt gcctcacaac ttcatgtgag acatttggga atagctgagc
     601  caaccttcca agtgtgatgg cattggcatt tgatcccacc gaggacacta
     651  tcccatacct tgataccaag gttgaagcct cagtgcttcc agccgccact
     701  ttcactttct tggtgacatc tctcacaaag ccagtgcctc tcacatatct
     751  catggtgatg cacatagtca tatccttggc cagtgtttca ccacctttgt
     801  ctttcaatat gccaatcaga gttgcagcat catagcctgc atactctatc
     851  tgaccagcaa aagtcacaac atcagcttta tgagcagtca ggtaattcaa
     901  tgcatctttg gagatgtcat tgattgcctt ctgcaaatca gctagagtgg
     951  ttgccttgtt ggtacccat