Sequence of DPV Rice stripe virus

Rice stripe virus isolate LQ-2002 coat protein gene, complete cds.

ACC No: AY289043

Dated: 2003-06-03 | Length: 969 | CRC: 1605046848

                !!NA_SEQUENCE 1.0
ID   AY289043   standard; RNA; VRL; 969 BP.
XX
AC   AY289043;
XX
SV   AY289043.1
XX
DT   03-JUN-2003 (Rel. 76, Created)
DT   03-JUN-2003 (Rel. 76, Last updated, Version 1)
XX
DE   Rice stripe virus isolate LQ-2002 coat protein gene, complete cds.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-969
RA   Liao F., Wei T., Wu Z., Lin Q., Xie L.;
RT   "Molecular variability of rice stripe virus CP genes in China";
RL   Unpublished.
XX
RN   [2]
RP   1-969
RA   Liao F., Wei T., Wu Z., Lin Q., Xie L.;
RT   ;
RL   Submitted (28-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Fujian Agriculture and Forestry University, Plant Virology, Jiangshan,
RL   Fuzhou, Fujian 350002, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .969
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Rice stripe virus"
FT                   /isolate="LQ-2002"
FT                   /segment="RNA3"
FT   CDS             complement(1. .969)
FT                   /codon_start=1
FT                   /note="CP; possible pathogenicity related protein"
FT                   /product="coat protein"
FT                   /protein_id="AAP44094.1"
FT                   /translation="MGTNKATTLADLQKAINDISKDALNYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGETLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGSNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSGLGLTGCDNLLWDYV
FT                   PYYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLIDKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR
FT                   LYLAQQSKLMKILAENTSKTATEVSGLVKEFFEDEAEGPDD"
XX
SQ   Sequence 969 BP; 234 A; 251 C; 192 G; 292 T; 0 other;

  AY289043  Length: 969  June 10, 2003 09:42  Type: N  Check: 9000  ..

       1  ctagtcatct ggaccttccg cctcatcctc gaagaattcc ttcaccaacc
      51  cgctgacttc tgttgctgtc tttgaagtgt tctcagcaag aatcttcatc
     101  agcttactct gttgagccaa gtacagcctg gtctggttcc catatgtact
     151  gatcgtgttg acagacatac cagccagtgc atcgaagatt gtggtcttca
     201  ctttcccatt ggtgatgaat tcatctaaga ccttctttct accatcctcc
     251  ttcttcttgt caatcaagtt ctttgacttg catgtgataa ccaggagacc
     301  agttgtgtac ttcatcatgt ctatgtcctt tgtcaaacca cgctccttct
     351  tcttaccctc tggcatggtc tttttagtta tttggaagga gtgaatgatg
     401  tgcacaacaa ataagatgtg actgagggag tgagttgtgc agtaaggagc
     451  tgtttcactc tccagtttga tgtagtatgg aacatagtcc cacagcaggt
     501  tgtcacatcc tgtcagcccc agaccagaag agtcaacagc catcttaaca
     551  ccagaaattt gtcgcacaac ttcatgtgag acatttggga atagctgagc
     601  caaccttcca agtgtgatgg cattggcatt tgatcccacc gaggacacta
     651  tcccatacct tgataccaag gttgaagcct cagtgctccc agccgccact
     701  ttcaccttct tggtgacatc tctcacaaag ccagtgcctc tcacatatct
     751  catggtgatg cacatagtca tatccttggc cagtgtttca ccacctttgt
     801  ctttcaatat gccaatcaga gttgcagcat catagcctgc atactctatc
     851  tgaccagcaa aagtcacaac atcagctttg tgagcagtca ggtaattcaa
     901  cgcatctttg gagatgtcat tgattgcctt ctgcaaatca gctagagtgg
     951  ttgccttgtt ggtacccat