Sequence of DPV Rice stripe virus

Rice stripe virus isolate LY-2002 coat protein gene, complete cds.

ACC No: AY289044

Dated: 2003-06-03 | Length: 969 | CRC: 1835020837

                !!NA_SEQUENCE 1.0
ID   AY289044   standard; RNA; VRL; 969 BP.
XX
AC   AY289044;
XX
SV   AY289044.1
XX
DT   03-JUN-2003 (Rel. 76, Created)
DT   03-JUN-2003 (Rel. 76, Last updated, Version 1)
XX
DE   Rice stripe virus isolate LY-2002 coat protein gene, complete cds.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-969
RA   Liao F., Wei T., Wu Z., Lin Q., Xie L.;
RT   "Molecular variability of rice stripe virus CP genes in China";
RL   Unpublished.
XX
RN   [2]
RP   1-969
RA   Liao F., Wei T., Wu Z., Lin Q., Xie L.;
RT   ;
RL   Submitted (28-APR-2003) to the EMBL/GenBank/DDBJ databases.
RL   Fujian Agriculture and Forestry University, Plant Virology, Jiangshan,
RL   Fuzhou, Fujian 350002, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .969
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Rice stripe virus"
FT                   /isolate="LY-2002"
FT                   /segment="RNA3"
FT   CDS             complement(1. .969)
FT                   /codon_start=1
FT                   /note="CP; possible pathogenicity related protein"
FT                   /product="coat protein"
FT                   /protein_id="AAP44095.1"
FT                   /translation="MGTNKAATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT                   PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVRTTIFDALAGMSVNTISTYGNQTR
FT                   LYLAQQSKLMKILAENTSKTASEVSGLVKEFFEDEAEGPDD"
XX
SQ   Sequence 969 BP; 231 A; 253 C; 194 G; 291 T; 0 other;

  AY289044  Length: 969  June 10, 2003 09:42  Type: N  Check: 8169  ..

       1  ctagtcatct ggaccttctg cctcgtcctc gaagaactcc ttcaccaacc
      51  cgctgacttc agatgctgtc tttgaagtgt tctcagcaag gatcttcatc
     101  agtttgctct gttgagccaa gtacagcctt gtctgattcc cataagtgct
     151  gatcgtattg acagacatac cagccagcgc atcgaagatt gtggtcctca
     201  ccttcccatt ggtgatgaat tcatctaaga ccttctttct gccatcttcc
     251  ttcttcttgt cagccaggtt ctttgacttg catgtgatga ccaggagacc
     301  agttgtgtac ttcatcatgt ctatgtcttt tgtcagacca cgctccttct
     351  tcttaccctc tggcatggtc tttttggtta tttggaaaga gtgaataatg
     401  tgcacaacaa acaagatgtg acttagggag tgagttgtgc agtaaggagc
     451  tgtttcactc tccagtttga tatattgtgg aacatagtcc cacagtaagt
     501  tgtcacatcc tgttagtccc aggtcagagg agtccacagc catcttaaca
     551  ccagaaattt gtctcacaac ttcatgtgaa acatttggga atagctgagc
     601  cagccttcca agtgtgatag cattggcatt tgtccccacc gaggacacta
     651  tcccatacct cgacaccaag gtcgaagcct ctgtgcttcc agccgccact
     701  ttcactttct tagtgacatc tctcacaaag ccagtgcctc tcacatatct
     751  catagtgatg cacatagtca tatccttggc cagtgtgtca ccacctttgt
     801  ccttcaatat gccaatcaga gttgcagcat catagcctgc atactctatc
     851  tgaccagcaa aggtcacaac atcagcttta tgagcagtca ggtaagataa
     901  cgcatctttg gagatgtcat tgattgcctt ctgcaaatca gctagagtgg
     951  ctgccttgtt ggtacccat