Sequence of DPV Iranian wheat stripe virus
Iranian wheat stripe virus segment RNA2, complete sequence.
ACC No: AY312434
Dated: 2006-01-25 | Length: 3469 | CRC: 1804344918
ID AY312434 standard; genomic RNA; VRL; 3469 BP.
XX
AC AY312434;
XX
SV AY312434.1
XX
DT 08-JUL-2003 (Rel. 76, Created)
DT 25-JAN-2006 (Rel. 86, Last updated, Version 2)
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DE Iranian wheat stripe virus segment RNA2, complete sequence.
XX
KW .
XX
OS Iranian wheat stripe virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN [1]
RP 1-3469
RX PUBMED; 16328148.
RA Heydarnejad J., Barclay W.S., Izadpanah K., Hunter F.R., Gooding M.J.;
RT "Molecular characterization of Iranian wheat stripe virus shows its
RT taxonomic position as a distinct species in the genus Tenuivirus";
RL Arch. Virol. 151(2):217-227(2006).
XX
RN [2]
RP 1-3469
RA Heydarnejad J., Barclay W.S., Izadpanah K., Hunter F.R., Gooding M.J.;
RT ;
RL Submitted (02-JUN-2003) to the EMBL/GenBank/DDBJ databases.
RL Plant Virus Research Center, Shiraz University, Shiraz, Fars 71444, Iran
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FH Key Location/Qualifiers
FH
FT source 1. .3469
FT /db_xref="taxon:236807"
FT /mol_type="genomic RNA"
FT /organism="Iranian wheat stripe virus"
FT /segment="RNA2"
FT gene 83. .691
FT /gene="pv2"
FT CDS 83. .691
FT /codon_start=1
FT /db_xref="InterPro:IPR009965"
FT /db_xref="UniProtKB/TrEMBL:Q7TBM0"
FT /note="27 kDa protein; possible membrane associated
FT function"
FT /gene="pv2"
FT /product="pv2 protein"
FT /protein_id="AAP82273.1"
FT /translation="MSLLLFDDSYYQLLVQVNKHYGSYQKLFTLECTKEDHYIAVSDSS
FT WLLTFYKGEMSQSMKSYCAYVGAHCLGILAQTPNVLDEAKVKCWLCDKEAEQTTQHLKI
FT IKLTNLINGFELATESYQVCMKNHSSEDPSKYINEICFPKHLKGYMKERQKMEHKFIII
FT TNGFATNHNLKPIALCYEIQPGCDDYVVVGDYKCPFATM"
FT gene complement(897. .3401)
FT /gene="pc2"
FT CDS complement(897. .3401)
FT /codon_start=1
FT /db_xref="InterPro:IPR001360"
FT /db_xref="InterPro:IPR009547"
FT /db_xref="UniProtKB/TrEMBL:Q7TBL9"
FT /note="109 kDa protein; putative membrane glycoprotein"
FT /gene="pc2"
FT /product="pc2 protein"
FT /protein_id="AAP82274.1"
FT /translation="MYLLNLLMLVFFIIRYCQCRAITRDDWMIGKDDDLGKAHLQLSCV
FT YLNKPCTQSKLLNGYYIENGSICYNHGPINLHETCFAGKYDNRIPVHEIFSEFGGIRYI
FT DCDDEIVSKTTLVGFTQSAHQSKVLPINKENGLLVSYPYSETNEFKGFVYVEDIKYCKE
FT NSTKKRLNNDATSLDHPVVCEDGKLMAASSECDITVGETEFHIPNCANTKLPVYDTIIK
FT VCQNNFCKNVTCTVSSVCIAYDRMDFLTKAKNYECSDSYRYYGYLLTLTLIIIVCMFGV
FT VIINIIICLKPVFWLLKTIMLAIAGVCHRKPKLSMMEINMAEMRIVEETDEGILLSESS
FT HAPNSNVDEVIYKKARITPSGLIYIPYIFLGLSLLFSTANGLCNDLLSSLSNIEVCNGK
FT DCDFSSKILLTLYNTPQDFCLNQLSDIYKLRLTKISVKCLSRPLYYTNSYKRTIELSDW
FT KCKEDIRCTKDKSTSIWEKSSSLHYDYCVPDFHIFSYCPFYHYNWKRIQYTPTSHLACA
FT VKKCNDVQFEINGYLSKNGRVVHEFSGYGSSHDADILSLGVLSYNTQKLPREYVECGNK
FT AYERKSNDLGSFDSELMGSIQCPTMADAEKLTNNCQTKVEAVEDEKTISYAENDGITKL
FT TDTLTEPHKVIVLSENGISLDSMDVYPVTLTITSSIKISSILTSRISMNNTKCGIKGVE
FT RKLKKTIIKVKTPTKIVLSDLLVCKDIASCSLTFNKDDQAECYTTSYKVDGTGDSINCR
FT FLYSGDSISCKYDVSPIDIIVVSPQVDLTSFDGMRETGQNWSSFVMEMIRENPKLTIVV
FT SILPIGLFLKTLKRTYYDIIEG"
XX
SQ Sequence 3469 BP; 1048 A; 702 C; 611 G; 1108 T; 0 other;
ay312434 Length: 3469 25-JAN-2006 Type: N Check: 5347 ..
1 acacaaagtc ctgggtataa aagcaacgct tgtagctatt cgaaaaatct
51 tgtggaacta cgccgtaact tttacatcta caatgtcact tcttctgttt
101 gacgattctt actaccaatt gctagttcag gtgaacaaac actatgggtc
151 ctaccaaaag ctcttcactc ttgaatgcac caaggaggac cattacatag
201 cagtgtcaga ctcatcgtgg cttttaactt tctataaggg agagatgagc
251 cagtcgatga agagctactg tgcttatgtt ggggctcact gcttgggtat
301 tctagctcaa actcctaatg ttctggatga agcaaaagtg aaatgctggc
351 tctgtgacaa agaagctgag cagacaactc aacatctgaa aatcataaaa
401 ctgacaaatc ttatcaatgg gtttgagctg gccactgaat catatcaggt
451 gtgtatgaag aatcatagct ctgaagaccc ttctaagtat atcaatgaga
501 tatgctttcc aaaacacctg aaaggataca tgaaagaacg ccagaagatg
551 gagcataaat tcataatcat caccaatgga tttgcaacca atcataatct
601 taagcccata gctctatgtt atgaaattca gcctggctgt gatgattatg
651 tagtagtagg agactacaaa tgcccgtttg caacaatgtg aagataccga
701 ataattggac aatcaccagg atctacgatc cttttactga gaaatggact
751 agactgtgct taattgaaag ggtgctacgc acctcatccg gattttgagc
801 ttagctcatt ttagtttttt tgttattctt ttgtcttgtc ggaattgctt
851 gatgtcctaa ttgatcctga tcgcctgtgt taagtccagc atttggttat
901 ccttcaatta tatcatagta agttcttttt agagtcttta agaagagtcc
951 tataggcagg attgacacca caatagttag cttcggattc tctctaatca
1001 tttccatgac aaatgaactc caattctgcc ctgtctctct catgccgtca
1051 aagctagtca gatcaacctg aggagagacg acaattatat ctatgggaga
1101 cacatcatat ttgcacgaaa tgctatcccc agaatacaag aacctacaat
1151 tgatagaatc tccagtgcca tccaccttat atgaagtggt atagcattct
1201 gcttgatcat ctttattaaa tgtcagagag cagcttgcaa tatctttaca
1251 taccaataaa tcactcagga ctatttttgt aggagtcttc accttgatta
1301 tggttttttt caattttctc tcaactcctt tgataccaca tttagtgttg
1351 ttcatcgaga tcctactcgt caaaatacta gagattttga tgctagatgt
1401 tatagtgaga gtcactgggt aaacatccat actatctaga gaaataccat
1451 tctctgatag aacaatgact ttgtgtggct cagtaagagt atcagtcaat
1501 tttgttatac catcattttc tgcgtaactt attgttttct catcttctac
1551 agcttcaact ttagtttgac aattgtttgt caacttctct gcatctgcca
1601 tggtgggaca ttgaatgcta cccatcagtt cactatcaaa tgatcccaaa
1651 tcattactct tcctttcata agccttgtta ccacattcaa catattccct
1701 tggtaatttt tgagtgttgt aacttaaaac tcccagactc agaatatccg
1751 catcatgtga agaaccataa ccagaaaatt catgcacaac tctaccattc
1801 ttactaagat agccatttat ttcgaactgc acatcattac acttctttac
1851 tgcacaagct aaatgactag tgggagtgta ttgaattctc ttccaattgt
1901 agtggtaaaa aggacagtat gagaagatat ggaaatcagg aacacaatag
1951 tcatagtgca aagaagagct cttttcccat atgcttgttg acttatcttt
2001 ggtgcacctg atgtcttctt tacatttcca gtcactcagc tctatagtcc
2051 tcttgtagct attagtataa tacagtggcc tagacaagca cttcactgaa
2101 atcttagtga gtctcagttt atatatgtca gatagctgat ttaaacagaa
2151 gtcctgagga gtattgtata atgtcaacaa tattttggaa ctgaaatcac
2201 agtcttttcc gttgcaaacc tctatattgg ataagcttga taagagatca
2251 ttgcataaac cattggcagt ggaaaacagc agactaagac ccaagaagat
2301 gtaaggaata tatatcaacc cactaggagt tattctggcc ttcttgtaga
2351 taacttcatc aacattgcta tttggtgcat gcgatgattc tgataacagt
2401 attccttcat cagtttcttc cactattctc atctcagcca tgttgatctc
2451 catcatactc agttttggtt ttctgtgaca aacaccagct atggccagca
2501 tgatagtttt gagcagccag aatactggct ttaagcatat gattatattt
2551 ataataacca caccaaacat gcaaactatt atgatcaatg ttagtgtcaa
2601 gagatatcca taatacctat aggagtcaga acattcataa ttctttgcct
2651 tagttaagaa gtccatccta tcatatgcta tgcagacact actcactgtg
2701 catgtaacat tcttgcaaaa gttgttttgg cagactttta tgatagtgtc
2751 ataaacagga agcttggtgt tggcacaatt aggaatatgg aactcagttt
2801 ctccaactgt tatatcacac tcagacgatg cagccattag tttcccatcc
2851 tcacagacga caggatggtc tagacttgtt gcatcattgt tgagtctctt
2901 ctttgtacta ttctccttgc agtattttat gtcttcaaca tatacaaatc
2951 ctttaaactc atttgtctca gagtatggat aagagactag caaaccattc
3001 tccttattga ttggcaagac cttagattgg tgagctgatt gtgtgaaccc
3051 aactagagtt gttttagaaa caatctcatc atcacaatct atgtaacgta
3101 tgccaccaaa ttcagagaag atctcatgaa ctggaatcct attgtcatat
3151 tttccagcga agcaagtctc gtgcaagttt ataggtccat ggttgtaaca
3201 tatggatcca ttttcaatgt agtaaccatt caagagttta gactgggtgc
3251 atggtttgtt gagataaacg caggagagct gcaagtgtgc tttcccaaga
3301 tcatcatctt ttccaatcat ccagtcatct cgtgtaatag ctctacactg
3351 acaatatcgg atgataaaga aaacaagcat cagcagattc aataagtaca
3401 tctcgaagaa agttttttta atacgaattc tattaaaatt atcttttcaa
3451 tgatacccag actttgtgt