Sequence of DPV Iranian wheat stripe virus
Iranian wheat stripe virus segment RNA3, complete sequence.
ACC No: AY312435
Dated: 2006-01-25 | Length: 2337 | CRC: 1504219419
ID AY312435 standard; genomic RNA; VRL; 2337 BP.
XX
AC AY312435;
XX
SV AY312435.1
XX
DT 08-JUL-2003 (Rel. 76, Created)
DT 25-JAN-2006 (Rel. 86, Last updated, Version 2)
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DE Iranian wheat stripe virus segment RNA3, complete sequence.
XX
KW .
XX
OS Iranian wheat stripe virus
OC Viruses; ssRNA negative-strand viruses; Tenuivirus.
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RN [1]
RP 1-2337
RX PUBMED; 16328148.
RA Heydarnejad J., Barclay W.S., Izadpanah K., Hunter F.R., Gooding M.J.;
RT "Molecular characterization of Iranian wheat stripe virus shows its
RT taxonomic position as a distinct species in the genus Tenuivirus";
RL Arch. Virol. 151(2):217-227(2006).
XX
RN [2]
RP 1-2337
RA Heydarnejad J., Barclay W.S., Izadpanah K., Hunter F.R., Gooding M.J.;
RT ;
RL Submitted (03-JUN-2003) to the EMBL/GenBank/DDBJ databases.
RL Plant Virus Research Center, Shiraz University, Shiraz, Fars 71444, Iran
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FH Key Location/Qualifiers
FH
FT source 1. .2337
FT /db_xref="taxon:236807"
FT /mol_type="genomic RNA"
FT /organism="Iranian wheat stripe virus"
FT /segment="RNA3"
FT CDS 73. .666
FT /codon_start=1
FT /db_xref="InterPro:IPR007974"
FT /db_xref="UniProtKB/TrEMBL:Q7TBL8"
FT /note="nonstructural protein 3; ORF1"
FT /product="NS3 protein"
FT /protein_id="AAP82275.1"
FT /translation="MNISLYFSGVPTVDHSLLSKNGLSNITLTCRDVTIPLSLLTSFYD
FT TLHERHPSFDEHMFLQMLRKPDDSENLSVFLKSAIWMLSHKRDLPDHYRLPLSCLVSAF
FT SECFVELKPRAPSTKCWFCRIAKDGLPFRAEGIHGFPSDANLFIVPSKEHSSEKFEILS
FT GKKLYRSPSKKKHSYLIASDKPPLTSKYVEFTSP"
FT CDS complement(1269. .2222)
FT /codon_start=1
FT /db_xref="GOA:Q7TBL7"
FT /db_xref="InterPro:IPR008864"
FT /db_xref="UniProtKB/TrEMBL:Q7TBL7"
FT /note="ribonucleoprotein; ORF2"
FT /product="N-protein"
FT /protein_id="AAP82276.1"
FT /translation="MSMSVAEIQAEIERVSTLALKYITEHKDILVAFAGQIDYNGYDAG
FT KLLKILQDKSKNRDFGKDLCHLLVMRYTRGTGFVRDVRKKIKVAAGGETSHEIVTHYGI
FT VQSVGDNADAITLGRLAALFPNVSMTIVKSVSTGAKLAIDSADMGTSGIDILLWDFVPQ
FT FISLDSETAPFCNKKNANNVLLSLQILQGALTTKKTMPDQKKKLRNLITDYDFVKYTSE
FT LMVITCSAKNLTDEKKQTYRRKLVSAFQTDDSGYKQEFWDALGQVSVGCVRKLKKDAQN
FT YLKDRTTVLKVMVENCTKTEAEAIEAIKAFFAPEDV"
XX
SQ Sequence 2337 BP; 656 A; 526 C; 413 G; 742 T; 0 other;
ay312435 Length: 2337 25-JAN-2006 Type: N Check: 9771 ..
1 acacaaagtc ctgggtataa aaaaacaatc taaaatcatt ctaattctag
51 tttgacctga cttcttgttg taatgaacat atcactttac tttagcggtg
101 ttccaaccgt agaccatagc cttcttagca agaatggttt atcaaacatc
151 actctcacct gcagagatgt cacaattcct ctaagcttgc tgacttcatt
201 ctatgatact ctccatgaga ggcatccaag ctttgatgag cacatgttcc
251 tacagatgct cagaaagcca gatgactcgg aaaatctatc tgttttcctt
301 aaaagtgcca tctggatgtt gtctcataag agagatctcc cagatcacta
351 tagattgcct ttatcctgtt tggtttcagc attcagtgaa tgttttgttg
401 aactaaagcc tagagcccct tcaacaaaat gttggttttg caggatagct
451 aaagatggct tgccattcag agctgaggga atccatggtt tcccctcaga
501 cgccaatttg ttcatagtgc catctaaaga gcactcttct gagaagttcg
551 aaatcttgag tgggaagaag ctctaccgat cccccagtaa gaaaaagcat
601 agttacctta ttgcatcaga caagccacct ctcacatcaa agtatgtgga
651 gtttacctct ccatgaatga gtatttctta tcccttcttc cctttgctct
701 tgataggtta gtgagtacct gctttcctag agtagatatg ctaactatgt
751 tagcacctcc aaagtaggct ccaccctaga agcttcaagg ctgttaggaa
801 ctaaaacata aaaacataaa aaactgtgct aggcacaaca tccgctagtg
851 cattcggatg ggttttccta acctaaattt tttttgtttt tttatcttat
901 tcctattttt ttgatttttt tggtttttta ttattttttg tttttttatt
951 ttttattttt tgattttgat tcttttattt aattatttac aacattacaa
1001 tgtaaaagct taagagatac aaaccttgca acatatataa aatattaata
1051 aaagcgacta tattacaaaa gctactaaga tgctaatccc aataataata
1101 cagcacttat aaatacccat aacctaactt ataaataact agaaatttta
1151 attaataagc ataacaaagc ttaacaagca catcacgttc acagcatatc
1201 ccactctttt ttctaacaat ctgctcgagc tccaacaaca caccctgatc
1251 agtctagatt tcgagattct aaacatcctc gggagcgaag aatgccttaa
1301 tagcctctat ggcttcagcc tctgtctttg tgcaattctc caccattacc
1351 ttcagaacag tggttctgtc tttgaggtag ttctgagcat ccttctttaa
1401 ctttctcacg caccctactg acacttgccc cagggcatcc cagaattcct
1451 gcttgtatcc agaatcgtca gtctggaagg ccgaaaccaa cttcctcctg
1501 taagtttgct tcttctcatc ggtcaggttc ttagcagagc aggttatgac
1551 catgagctca gatgtgtatt tgacaaaatc atagtcagta atcaaatttc
1601 tcaacttctt tttctgatca ggcattgtct tctttgtagt caatgctcct
1651 tgcagtatct gaagagaaag caggacattg tttgcattct tcttattgca
1701 gaatggtgct gtctcggagt caaggctgat gaattgaggc acgaagtccc
1751 atagcaggat gtcaattcca cttgtcccca tgtctgctga gtcaattgcc
1801 agctttgctc ctgtggagac actcttgact atggtcatag acacattagg
1851 aaacaaagca gcaagccgac ccagagtgat agcatcagca ttgtccccaa
1901 ctgattgaac tatgccatag tgagttacta tctcatgaga agtctcacca
1951 cctgctgcaa ccttgatctt cttcctgaca tctctcacaa atccggtacc
2001 cctagtgtac ctcatgacaa ggaggtgaca gagatctttt ccaaagtctc
2051 tattcttaga cttatcctgc agaattttga gcagcttgcc agcatcatag
2101 ccgttgtagt ctatctggcc agcaaaagca acaagaatgt ccttgtgctc
2151 agtgatgtac ttgagagcta gggtggaaac tctctcaatc tccgcctgga
2201 tctcagcaac agacatcgac atggcgtcta actctgtgtt tctactgtgt
2251 atgggtgcaa ttgtggttct caagcgaagt tcgtttgtga aaacaatgaa
2301 gcttgatgat ctttacaata gtacccagac tttgtgt