Sequence of DPV Guanarito virus
Guanarito virus strain INH-95551 segment L, complete sequence.
ACC No: AY358024
Dated: 2003-08-29 | Length: 7081 | CRC: -670802628
!!NA_SEQUENCE 1.0
ID AY358024 standard; genomic RNA; VRL; 7081 BP.
XX
AC AY358024;
XX
SV AY358024.2
XX
DT 28-AUG-2003 (Rel. 77, Created)
DT 29-AUG-2003 (Rel. 77, Last updated, Version 2)
XX
DE Guanarito virus strain INH-95551 segment L, complete sequence.
XX
KW .
XX
OS Guanarito virus
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC New world arenaviruses.
XX
RN [1]
RP 1-7081
RA Bowen M.D., Thurman K., Minor E., Meyer R.F., Malfatti S.A., Do L.H.,
RA Smith K.L., McCready P.M., Chain P.S.G.;
RT ;
RL Submitted (01-AUG-2003) to the EMBL/GenBank/DDBJ databases.
RL Viral Sequencing Group, Lawrence Livermore National Laboratory, 7000 East
RL Avenue, Livermore, CA 94550, USA
XX
CC On Aug 27, 2003 this sequence version replaced gi:33868615.
XX
FH Key Location/Qualifiers
FH
FT source 1. .7081
FT /db_xref="taxon:45219"
FT /mol_type="genomic RNA"
FT /note="large segment"
FT /organism="Guanarito virus"
FT /strain="INH-95551"
FT /segment="L"
FT primer_bind 1. .20
FT CDS 75. .362
FT /codon_start=1
FT /note="zinc finger protein"
FT /product="Z protein"
FT /protein_id="AAQ55253.1"
FT /translation="MGNSKSKSNPSSSSESQKGAPTVTEFRRTAIHSLYGRYNCKCCWF
FT ADKNLIKCSDHYLCLRCLNVMLKNSDLCNICWEQLPTCITVPEEPSAPPE"
FT misc_feature 368. .455
FT /note="hairpin intergenic region"
FT CDS complement(455. .7051)
FT /codon_start=1
FT /note="L polymerase"
FT /product="L protein"
FT /protein_id="AAQ55254.1"
FT /translation="MDEKVFVLKDFIRRQVPDIPELSYQKEALLSQVEVPMVLTEGFKL
FT LSCLVEIESCRKNSCECNFEQKFVDTILSENGVVAPTLPKVIPDGYRFFNKTLILLETF
FT VRVNPEEFEKKWKTDMAKLLSLKEDIHRTGITLVPVVDGRGNYNTDLLPDWATERFRWL
FT LIDLLRESRGAPTMEIEDQEYHRLIHSLSKTSNQSLGFENIECLKRVHLNYEERLNEQL
FT LKDIVGEVRESKIREELIKLKTWYREEIYRKGLGNFVQTDRKSLLQTLVLSSAHSDSLA
FT PECPMCCSKILDLCYQLSMRIANQTSLENNFDEPPLPTTQIEKVYLSLLSACNKIKGKK
FT VFNTRRNTLLFLDLIILNFVAHVYKTQPSEMETLKKAGLIIGEMLLLPNDRVLDILVAR
FT RLLLKKVESCCNWLDRCRHLLRKEEPVLWDCVSEFTNVPDFELLLSLAEELCSEKPVMH
FT YKPPSSLIGDCAHKDLMSMSDGEFESLFKCLSHISLSLVNSMKTSFSSRLLVNEKDYKR
FT YYGTVRLKECYVQRFFLRVGLYGLLFYQKTGEKSRCYSLYLSDKGNLVELGSFYSDPKR
FT FFLPIFSEFVLLATCAEMLSWLDFDEKLVDAVTPLLKILVLSILSSPTKRSQTFLQGLR
FT YFIMAYVNQAHHIQLMSKLAVECKSASDVLIQRLSVKIVDMVLSDGSDPDMHMTRKFKF
FT VLNVSYLCHLITKETPDRLTDQIKCFEKFMEPKLEFGSLIVNPSLNGFLSKEQEDVMIE
FT GVEKFFSKELLTVEDLKRPGVSRELLSYCVSLFNKGRLRVNGTLGTDPYRPSFTSTALD
FT LSSNKSVVIPKLNEVGEIVSEYDKQKLVSTCITSMAERFKTKGRYNLDPDTIDFLIMRN
FT LTNLLSARKLDSSKKEELSLLYEHLSEDVMKAFEEIKYEVEITLSKMRLSRELECGHKK
FT PCTLEGVWAPFNVLKVIRSETSVHEIRDFDPDLLGEDVYEKLCVAVYDSPLRPTFFLEK
FT PLDICPLELLLKNLTTKSYEDDEFFDCFKYILIQAGFDQRLGAYEHKNRSRLGLSEEAF
FT RLKEDVRVSNRQSNSEAIADRLDKSFFTSAALRNLCFYSEESPTEYTCISPNVGNLKFG
FT LSYKEQVGSNRELYVGDLNTKMMTRLVEDFTEAVANSMNYTCLNSEKEFERAICDMKMA
FT VNNGDLCCSLDHSKWGPFMSPALFHAFFGALKFKISKTGEQVDLGPVLNVLKWHLHKAV
FT EVPISVAEAYCTGMLKRRLGLMSLSCQSVCEEFFHQKLLLEEGVPSHIMSVLDMGQGIL
FT HNSSDLYGLITEQFINYCLDFLFDVIPVSYTSSDDQITTFKLPTMSSSEDGLDGFDWLE
FT LLCFHDFLSSKFNKFVSPKSVSGTFVAEFKSRFFVMGEETPLLTKFVSAALHNVKCKTP
FT TQLAETIDTICDQCVANGVGIEIVTKISERVNRLIRYSGYPQTPFLAVEKQDVKDWTDG
FT SRGYRLQRNIEHYLQGSEQLEFVRKCAKKVLLKIKKGQVFEEYLVQLIGKDGDDALKGF
FT LSYAGCESDEIKDVLKYRWLNLSANGDLRLVLRTKLMSTRRVLEREQIPTLIKTLQSKL
FT SKNFTKGVKKILAESINKSAFQSSVASGFIGFCKSMGSKCVRDGSGGFMYIREVLNKQR
FT VCPCEICAQNPGIIFCSDALTLIPEFSRSILWDYFSLVLTNACELGEWVFSSVQPPKVP
FT ILLNNPNLFWAVKPRGTRLIEDQLGLGHVLQSVRRSYPKVFEEHLVPFMNDLQVSRTTD
FT FTRLRYLDVCVALDMMNENLGIVSHLLKAKDNSIYIVKQSECAVAHIRQVEYVNQELGL
FT SPQQICSNFKIQLVFSSMINPLVITTSVLKSFFWFNEVLNLEDESQIDVGELTDFTILI
FT KKYNLNRAMMLDDLTMGYVVSTISEPTIHLVSLKRNSNSIVGEQNSEMLHGEQVEDMYS
FT IVLHIQLEHKRHSTKYHLSRTVVYSYTVECETNITDIEKEPSLATVKNVVLRASGSIEG
FT HQFLDGVNLVASQPIFTGKKVINLSELLADSEITETYKEGDAVGSILLNFGTFYEHIDD
FT RYAYEIVGPECSDSPLVLDGGSILADGKKLSSIKVELTGDVILKALGALESEKEVQSLL
FT TGLWPFIRINNLKVKMAQEDFLLMYEMHRESLLKSLEVFSEWCEFVDFSVCYSKSLRDL
FT VISDSSGSLRLKGITCKPINLSNSVTEIE"
FT primer_bind complement(7063. .7081)
XX
SQ Sequence 7081 BP; 2085 A; 1604 C; 1206 G; 2186 T; 0 other;
AY358024 Length: 7081 December 5, 2003 15:01 Type: N Check: 8463 ..
1 gcgcacagtg gatcctaggc gtaactttca cgcctataag ttgagatttt
51 cacaacttga acccatttac aaacatgggc aattcaaaat ctaaatccaa
101 cccatccagt tcctcagagt ctcaaaaagg ggcaccaaca gtcacagaat
151 ttaggaggac tgccattcac agtctctatg ggaggtacaa ctgcaagtgt
201 tgctggtttg ctgacaagaa tctgattaaa tgctctgatc attacctctg
251 cttgaggtgt ttaaatgtca tgctgaaaaa ctctgatctt tgcaacattt
301 gttgggagca gctgcccaca tgcatcacag ttccggagga gccaagcgct
351 ccaccggaat gaatgcgggt ggcgtagatc atcactccca cccccggggg
401 ccccagtggg gcccccaccg gggatgcccg ggggtgttgc tggtcctctg
451 tggcctactc aatttcggtg actgaatttg acagattgat gggtttacag
501 gtgatgcctt tgagcctcag gctgccggag ctgtctgata tcaccaagtc
551 ccttaaagat ttgctatagc agacactaaa gtccacaaac tcgcaccatt
601 cgctgaagac ctcaagagat tttaacaatg attccctgtg catctcatac
651 attaaaagga agtcctcctg agccatcttc acttttagat tgtttattct
701 aatgaatggc cacaaccctg tcagcaggct ttgcacttcc ttttctgatt
751 ctagggcccc taatgccttt aggatgacat ccccagtgag ttcgactttt
801 atgctggaaa gctttttgcc atcagctaag atagagcctc catcgagcac
851 tagaggggaa tcggaacact caggccccac aatttcataa gcatatctgt
901 cgtcaatatg ttcataaaat gtaccaaagt ttagaagaat tgatcccact
951 gcatcgccct ctttgtatgt ttctgtgatt tctgagtcag ccagcagctc
1001 acttaggttt atgacttttt tccctgtgaa tataggctgg gaagcaacaa
1051 ggttaacacc atctaaaaat tgatggccct cgatggatcc agatgctctc
1101 agcaccacat tctttacagt tgctaagctt ggttctttct caatgtcagt
1151 gatgttagtc tcacattcaa ctgtgtaaga ataaacaact gttcttgata
1201 aatggtactt tgttgaatgc cttttgtgct caagttggat gtgcagcact
1251 atggaataca tatcttccac ttgttctcca tgaagcattt cagagttttg
1301 ttcacccaca attgaatttg agtttctttt aagtgaaact aaatgtatgg
1351 tgggctcact aattgttgac accacataac ccattgttaa atcatccagc
1401 atcattgctc tattcaagtt gtactttttt atcagtattg taaagtcagt
1451 gagctcaccg acatcaatct gactttcatc ttctagattc aaaacctcat
1501 taaaccagaa gaaagacttt agcacagatg ttgtaataac taaaggatta
1551 atcatagatg aaaagaccaa ctgtatttta aaattactgc aaatctgttg
1601 agggcttaac cctaattcct gatttacata ttcaacttgt cttatatgtg
1651 cgacagcaca ctcactttgt ttaacaatat atattgaatt atcctttgcc
1701 ttcaacagat gagacacaat tcccaaattt tcattcatca tgtcaagagc
1751 aacacacaca tctaagtacc tcagtcttgt gaaatcagta gtgcgactaa
1801 cctgtaggtc attcatgaac ggtactaagt gctcttcaaa aactttaggg
1851 taactcctcc ttactgattg caatacatga cctaatccta attgatcttc
1901 aattaaacgg gttcctctag gtttaacagc ccaaaagaga ttggggttat
1951 ttagtagaat gggcactttt ggaggttgta ctgaagagaa cacccattct
2001 cctaactcac aggcatttgt taacaccaga gaaaaataat cccataatat
2051 tgatctcgaa aattctggta ttaaggtcaa tgcatcagaa caaaaaatga
2101 tcccagggtt ttgtgcacat atctcacagg gacataccct ctgcttattt
2151 aaaacctcac gaatgtacat gaaacctcca ctgccatctc taacacactt
2201 gctacccata ctcttacaaa aaccgatgaa acctgaagca acagatgatt
2251 ggaacgctga cttgttgatt gattctgcca gaattttctt gactcctttt
2301 gtaaaatttt ttgagagttt tgactgtaac gtcttgataa gagttggaat
2351 ttgctctctt tcaagcaccc ttcttgttga cataagtttt gtcctcaaca
2401 caagccttaa gtcaccattt gcagataaat ttagccagcg gtacttaagg
2451 acatccttaa tttcatctga ttcacagcct gcataagaca aaaagccttt
2501 caaagcatca tccccatctt tccctattag ctgaactaag tattcctcaa
2551 aaacttgccc tttctttatt tttaacaaaa ccttttttgc gcacttcctc
2601 acaaattcca attgttcact cccttgtagg tagtgttcaa tattcctttg
2651 taatctgtaa cctcttgagc catcagtcca gtccttaaca tcttgttttt
2701 caacagcaag aaagggcgtt tgagggtaac cagagtacct aattaacctg
2751 ttcactcttt ctgatatttt tgtgacaatt tcaattccga caccattagc
2801 cacacattga tcacaaatcg tatcaatagt ttcagcaagt tgtgttggag
2851 ttttacactt gacattatgc aatgctgcag atacaaactt ggttaacaga
2901 ggtgtttcct cacccatgac aaagaacctt gatttaaact cagcaacaaa
2951 agtcccagaa acactcttgg ggctcacaaa tttgttgaat tttgaggaca
3001 aaaaatcgtg gaaacataaa agctctaacc aatcaaaacc gtctaaccca
3051 tcttcacttg aagacatagt tggcaatttg aacgttgtga tctgatcatc
3101 actagacgtg taagacaccg gtatcacgtc aaagaggaaa tccaaacagt
3151 agtttatgaa ttgctcagta atcaaaccat aaagatcaga tgaattgtga
3201 agtatgccct gtcccatgtc taagacagac ataatatgac tgggcactcc
3251 ttcttctaat aataatttct ggtgaaagaa ctcttcacac actgattggc
3301 agcttaaact cattaaaccc aaccttcttt tcaacatgcc tgtgcaatat
3351 gcctcagcaa cactgattgg tacttctaca gctttatgta aatgccactt
3401 taacacattt agaactggcc cgagatctac ttgttcacct gtcttactaa
3451 ttttaaactt aagagctcca aagaatgcat gaaaaagagc tggactcatg
3501 aaagggcccc attttgaatg atctagagaa cagcacaggt ccccattgtt
3551 cacagccatc ttcatatcac agattgccct ctcaaactct ttttcagagt
3601 taagacatgt gtaattcatt gagttagcca ctgcctcagt aaagtcttca
3651 actaatcttg tcatcatctt tgtgtttaag tcacctacgt aaagttctct
3701 atttgaacca acttgctctt tgtaactcaa accaaatttc aaattaccca
3751 catttgggct aatacatgtg tactctgttg gggattcctc cgaataaaag
3801 cacaagttcc ttagagcagc actggtgaag aaactcttgt ctagtctgtc
3851 agctatggct tctgaattac tctgtctatt gctcactctc acatcctcct
3901 ttagcctaaa agcttcctct gagagcccca atctggacct atttttatgt
3951 tcataagccc ctaacctctg atcaaatcct gcttgaatca ggatgtactt
4001 gaaacaatca aagaattcat catcttcata agattttgtt gttaagtttt
4051 tcagtaggag ttccaatgga cagatgtcaa gaggcttttc caaaaagaag
4101 gtaggtctta atggagaatc ataaacagcc acacataact tttcatagac
4151 atcttccccc aagaggtcag gatcaaaatc cctaatttca tgaacacttg
4201 tctcactcct aattactttc aagacattga agggtgccca cacaccttcc
4251 agtgtacatg gttttttgtg gccacactca agttcccttg agagcctcat
4301 tttgcttaaa gtgatctcaa cttcatactt tatctcttca aatgctttca
4351 tgacatcttc agacaagtgc tcatataaca atgacaactc ttccttcttg
4401 ctgctgtcaa gttttcttgc agacaaaaga ttagtcaagt tcctcataat
4451 cagaaagtcg attgtatcgg gatctagatt ataccttccc tttgtcttaa
4501 atctttctgc cattgaagta atgcaagtgg aaaccaattt ttgtttgtcg
4551 tattccgaca caatctctcc cacttcgttt aatttcggaa taacaacact
4601 cttgttgcta gataagtcta atgcagtgct tgtgaaactg ggtctatagg
4651 ggtctgtacc caatgtacca ttaactctta gccttccctt gttaaaaagt
4701 gacacacaat aactcagtag ctctctagaa acccctggtc tctttaaatc
4751 ttccacagta agaagctctt ttgagaagaa cttctctaca ccctcaatca
4801 tgacatcttc ttgttcctta gacagaaagc catttaaaga tgggttaaca
4851 atgagactac caaactctag ttttggttcc atgaatttct caaaacactt
4901 aatttgatct gtgagtctat ctggagtttc ttttgtgatc aaatgacata
4951 agtaacttac atttaagaca aacttaaact tcctcgtcat atgcatgtct
5001 ggatcagaac catcacttaa caccatatcc acaattttta cactaagcct
5051 ctgaattaaa acatctgagg ctgatttgca ttcaacagcc aacttgctca
5101 tcaattggat atgatgggcc tgattgacat acgccatgat gaaatacctt
5151 aatccttgta gaaatgtttg actccttttt gttggtgaac tcaatatact
5201 taaaaccagg attttcaata agggggttac tgcgtcaacc aacttctcat
5251 caaaatctaa ccagcttaac atctctgcgc atgtagctag aagcacaaat
5301 tcagagaata tgggcaaaaa gaatcgttta ggatcagaat aaaaagatcc
5351 aagttctaca aggttccctt tatcagaaag gtaaagggag taacaacgtg
5401 atttctcacc tgttttttgg taaaataaaa gcccatacaa gcctactctt
5451 aaaaagaacc tctgcacata gcattctttt aatctaactg tgccatagta
5501 tctcttataa tccttttcat ttactagaag tctggaagag aatgatgtct
5551 tcattgaatt tacgagagaa agtgatatat gcgacagaca tttaaataaa
5601 ctctcaaact ctccatctga cattgacatc aggtccttat gggcacaatc
5651 gccaatcaat gaacttggag gtttgtagtg cataacaggc ttctctgaac
5701 agagctcctc agctaaagat agcaacaact caaagtctgg aacatttgtg
5751 aactctgaca cacagtccca tagaacaggc tcttctttcc ttaacaaatg
5801 tctacacctg tccaaccaat tgcagcagga ctcaactttc ttcaatagaa
5851 gcctccttgc aaccaaaata tctaaaaccc tgtcgttggg aagtaataac
5901 atctcaccga taatcagacc tgcttttttc aaggtttcca tttcagaagg
5951 ttgtgtctta taaacatgtg ccacaaagtt caaaatgatt aagtccaaaa
6001 atagaagtgt gtttcttctg gtgttaaaca ctttctttcc ttttatctta
6051 ttgcacgctg ataacaatga cagataaact ttttctatct gggttgtggg
6101 aagaggaggt tcatcaaaat tattctccag tgatgtttgg tttgcaattc
6151 tcattgagag ttgataacat aagtcaagga ttttactaca gcacatggga
6201 cactcagggg ccaatgagtc agagtgggca ctcgacaaca ccaaagtctg
6251 tagtagggac tttctatctg tctgaacaaa attcccaagg cctttcctgt
6301 agatttcttc tctgtaccaa gttttcaatt tgatcaactc ttccctaatc
6351 ttggattccc taacttctcc cacaatgtct ttaagcaatt gctcattgag
6401 tctttcctca taattcagat gaaccctttt taagcattct atattttcaa
6451 acccgaggct ctgattactt gttttagaga ggctatgaat caacctatgg
6501 tactcctgat cctcaatctc cattgtagga gctcctcttg attctctcag
6551 cagatcaata agcaaccatc tgaatctttc agtcgcccaa tctggcagca
6601 aatctgtgtt gtagttgcct ctaccgtcaa ccacaggaac cagtgtaata
6651 cccgttctgt gaatgtcctc ttttaaacta agcaattttg ccatgtcggt
6701 tttccacttc ttttcaaact cttcaggatt cacacggaca aatgtttcaa
6751 ggagtatcaa tgtcttattg aagaacctgt aaccgtcagg tatcaccttt
6801 ggtagtgtgg gtgcaaccac cccattttca gagagtattg tatcaacaaa
6851 tttctgttca aagttgcact cacaagaatt cttcctgcag gattcaatct
6901 cgaccaggca tgataggagc ttgaagccct ctgttaagac cattggtact
6951 tcgacttgag aaagtaatgc ctccttctga taagacagtt caggtatgtc
7001 aggcacttgt cttctgataa aatctttcaa aacaaagact ttttcatcca
7051 ttgtcaaatt tcgcctagga tccactgtgc g