Sequence of DPV Tobacco ringspot virus
Tobacco ringspot virus RNA2 segment, complete sequence.
ACC No: AY363727
Dated: 2005-04-16 | Length: 3929 | CRC: -1131254915
!!NA_SEQUENCE 1.0
ID AY363727 standard; genomic RNA; VRL; 3929 BP.
XX
AC AY363727;
XX
SV AY363727.1
XX
DT 02-SEP-2003 (Rel. 77, Created)
DT 16-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE Tobacco ringspot virus RNA2 segment, complete sequence.
XX
KW .
XX
OS Tobacco ringspot virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup A.
XX
RN [1]
RP 1-3929
RA Moon J.S., Domier L.L., Hartman G.L.;
RT "Nucleotide sequence of Tobacco ringspot virus RNA2";
RL Unpublished.
XX
RN [2]
RP 1-3929
RA Moon J.S., Domier L.L., Hartman G.L.;
RT ;
RL Submitted (07-AUG-2003) to the EMBL/GenBank/DDBJ databases.
RL ARS, USDA, 1102 S. Goodwin Ave., Urbana, IL 61801, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .3929
FT /db_xref="taxon:12282"
FT /mol_type="genomic RNA"
FT /organism="Tobacco ringspot virus"
FT /segment="RNA2"
FT CDS 123. .3428
FT /codon_start=1
FT /db_xref="GOA:Q6UR06"
FT /db_xref="HSSP:1A6C"
FT /db_xref="UniProt/Swiss-Prot:Q6UR06"
FT /product="polyprotein"
FT /protein_id="AAQ63694.1"
FT /translation="MEPLLWHVDATTPSHIQALQSGSLPPASPAAALTRVQRALSFFRT
FT AARKYCKQADAPDLFALAMTRVAEHNDIAVDARNVEQLFHFVGQHVANTAERKALRAAL
FT REQRALFKASLPGACFPAPAPPGWGIPKPPPLPPPFVWKGCRYNVVAPPPRIPQPPPLP
FT KFAPFVRNNFRVVAPPPLGEVYQPVGAPFPQTRASAALSFFRTASTCRQVLVESCIQQP
FT AFMTCCASTGEVQEMTSMLTEARQTGKILTPKEVSQALAQKRKEIKGAEENRISFDEGV
FT HLTEADVFHRLSLAKRFMAHKRDRTLVDVLMPTEHEVVRYPGTRPDGTLQMCVSALPRM
FT SEEAARKLLEKGWKNSKNVSLDIGVTSYMPYGAPIVAFMTIMDGRTDDPQEAALCANYM
FT DLGREKSKVLSLPLVTIPLSEIEHDQGILDCLYIVTYFHGVQSYQPGTLMMSYGTLEFQ
FT EYSNNSFTTATRVRESWDQILKRNENLGKRVHAGIGVLGTIEKEMDQQLEDFPAINLET
FT RPRPVVRTFQNAHQPLHKTRSMRIGTTSFTGNTGRTVLPPVVKTYEEGNANFDSLQSKP
FT RHSSASTAHLMCAVTVVPDPTCCGTLSFKVPKDAKKGKHLGTFDIRQAIMEYGGLHSQE
FT WCAKGIVNPTFTVRMHAPRNAFAGLSIACTFDDYKRIDLPALGNECPPSEMFELPTKVF
FT MLKDADVHEWQFNYGELTGHGLCNWANVVTQPTLYFFVASTNQVTMAADWQCIVTMHVD
FT MGPVIDRFELVPTMTWPIQLGDTFAIDRYYEAKEIKLDGSTSMLSISYNFGGPVKHSKK
FT HAISYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHEAPPTLRQVLWGPHQI
FT MHGDGQFEIAIKTRLHSAATTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTWRPDS
FT QVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPLSWLV
FT AATGWHYGEVDLCISWPRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTEAEIP
FT IFLGSYAGATPSGALGKQNYVRISIVNAKDIVALRVCLRPKSIKFWGRSATLF"
XX
SQ Sequence 3929 BP; 884 A; 957 C; 942 G; 1146 T; 0 other;
AY363727 Length: 3929 April 19, 2005 08:57 Type: N Check: 8917 ..
1 ttgaaaattc tctcacaggg ttccggttac gttgttcttt tactctcttt
51 ttattttaat tgttcaaaat tgcgattctg aagcttccta ctttctggtg
101 cccgcatttt ctctctgctc cgatggagcc cctcttatgg cacgttgatg
151 ccaccactcc ttcccacatc caggctctcc agtcagggtc tctccctcct
201 gcttctccgg ccgcggctct cacccgcgtc caacgcgccc tttccttctt
251 ccggactgct gcccggaagt actgcaagca ggccgatgcg cctgacttgt
301 ttgccctggc aatgaccagg gttgctgagc acaacgacat tgccgttgat
351 gcaagaaatg tggaacagct gttccacttt gttggccaac atgtggccaa
401 cactgctgag cgcaaggcgc tccgggctgc tcttcgtgag cagcgggctt
451 tatttaaggc atccctgccc ggtgcctgtt ttcctgctcc agctcctcca
501 ggctggggta ttccaaaacc cccccctctt cctccacctt ttgtgtggaa
551 aggatgccgc tacaatgtgg tggcccctcc tccacgcatc ccgcaaccac
601 ctccactgcc taaatttgcg ccttttgtgc gcaacaactt tagagtggtt
651 gctccccctc cccttggtga ggtgtaccaa cccgttggtg cacctttccc
701 acagacccgg gcctccgcgg ccctctcctt ctttcgcact gcctccacct
751 gcaggcaggt cttggttgag agctgcattc agcagcccgc cttcatgact
801 tgctgtgctt ctaccgggga agtgcaagaa atgacgagca tgcttactga
851 agctcgtcag actggaaaaa tcctgactcc caaagaggtg agtcaggcct
901 tggcccaaaa acgcaaagaa atcaaagggg ctgaggaaaa tcgcatctcc
951 tttgatgaag gggtgcattt gacagaggcg gatgtcttcc atcgtctcag
1001 tcttgcgaag cgcttcatgg cgcataagcg agaccggact ttggtggacg
1051 ttttaatgcc tactgaacat gaagttgttc ggtatccagg cacccgccct
1101 gacgggacat tgcagatgtg cgtgtctgcc cttccacgca tgtctgagga
1151 agcagctagg aagctgcttg agaaggggtg gaagaactcc aaaaacgtct
1201 ctctagacat tggggttact tcctatatgc catatggtgc gcccatagtt
1251 gcattcatga ctattatgga tgggcgtacc gatgatccac aagaggcagc
1301 actttgtgcg aattacatgg accttggtcg agaaaagtcc aaggtgttgt
1351 ctcttccact tgttaccatt cccctctctg agattgaaca tgatcaaggc
1401 attttggatt gcctttatat tgttacatat tttcatggtg ttcaatctta
1451 tcaacccgga actttaatga tgagttatgg aactcttgag tttcaagaat
1501 attccaataa ctcttttaca actgctactc gggttagaga gagttgggac
1551 cagattctca aacgcaatga gaatcttggg aaaagagtcc atgccggcat
1601 cggggtgctt ggcactattg aaaaagaaat ggaccagcaa cttgaggact
1651 tccccgccat aaatctggaa actaggccac ggcctgttgt gcgaactttt
1701 cagaatgcac atcagccgtt gcataagacc agatctatgc gaattggcac
1751 tacctctttt actgggaaca ctggtaggac tgtactccca ccagtggtta
1801 aaacctatga agagggaaat gctaattttg attccctaca atccaaacca
1851 cgtcacagct ctgccagcac tgctcatttg atgtgtgctg tgacggttgt
1901 tcccgatccc acttgttgtg ggacattgtc ctttaaggtt cccaaagatg
1951 cgaagaaagg aaagcatctt ggaacttttg acattcggca agccattatg
2001 gaatatggtg gtttgcattc ccaagaatgg tgtgcaaagg gcattgttaa
2051 tcccactttt acagtgagga tgcatgcccc acgcaacgcc tttgcaggtt
2101 tgtctatagc gtgcaccttt gatgattaca aacgcataga cttaccagcg
2151 cttgggaatg aatgtcctcc ctccgagatg tttgaactgc ctaccaaggt
2201 tttcatgctt aaagatgcag atgtgcatga atggcagttc aactatgggg
2251 aacttacagg acatgggttg tgcaattggg caaatgtagt tacccagccc
2301 acattgtact tttttgttgc gtccacaaat caagtgacga tggctgctga
2351 ttggcagtgt attgttacta tgcatgtgga catggggccc gtcattgatc
2401 gttttgagtt agttccaact atgacgtggc ctattcaatt gggtgacact
2451 ttcgccattg atagatatta tgaggcgaaa gaaattaaac ttgacgggtc
2501 aacctccatg ttgtccatat cttataattt tggaggtccc gtcaagcatt
2551 ctaagaaaca tgccatttca tattcccggg cagttatgtc taggaatctt
2601 gggtggtctg gcactataag cggaagtgtc aagagtgttt cttctttatt
2651 ttgtaccgct tcttttgtta tttttccatg ggaacatgaa gcacctccaa
2701 ccttacgtca ggtgttatgg ggcccacatc agataatgca cggagatggc
2751 caatttgaaa ttgctatcaa aactcgtctt cattcagctg ctacaactga
2801 agaagggttt ggtagacttg gtatactccc gctttctggg cctatagctc
2851 ctgatgcaca tgttggatcg tacgagttta ttgtacatat agacacttgg
2901 cgacccgact ctcaggtgca tcctcccatg ttttctagtg cggagcttta
2951 taattggttc actttaacca atttgaaacc agatgcgaac actggcgtag
3001 tcaactttga tattcccgga tacatccatg acttcgcctc taaggacgca
3051 actgtgacgc tcgcatcaaa tcccctctct tggcttgtcg cagctactgg
3101 ctggcattat ggtgaggtgg atctctgcat ctcctggcca aggtccaaac
3151 aggcccaggc tcaggagggt agtgtttcca ttaccactaa ttatagagat
3201 tggggtgctt actggcaagg ccaggcccgg atttatgatt tgcggcgtac
3251 tgaagcggaa attcccatct tcttgggttc ttacgctggt gcgacgccat
3301 ctggtgcctt gggtaagcaa aactatgtcc ggatttcaat tgtcaatgct
3351 aaggacatag ttgcactgcg agtgtgtttg cgacccaaat ctataaagtt
3401 ttggggtcgc tccgccactt tgttttaaat gcctttagtt aggtgttttg
3451 tccttttgat tcttcaaacc aggattggta gcccttttgg cattcatttg
3501 ctggaaacca tgctgtacat ggttggttag ataaaagcgt caataaaccg
3551 ggactttaat tagtcccgtt ttaggttcct gcccttacta gggtggtccg
3601 gtccttaggt ggatcgggaa gctgtataaa ctcagctttt tgggggtgag
3651 agcccaagaa tgtctgtctg tcagctgctt gtgtaaatga gctttctccc
3701 aggatagctc tcctgggcac aagtgaaaac tactgtcgtg gcgagttagt
3751 agccagacga ccggagtaaa atctctagtt aacaaaatgt gttagaccgt
3801 tgtttctggc agctttgttg ggtctgttgg gttttctaaa gctgctttgc
3851 tatttgctgt tgtttgagcc cactgttcat atttggtttg gggcctttta
3901 tgtttcgtag tgtcgtgttt gtccccccc