Sequence of DPV Opuntia virus X
Opuntia virus X strain CC10 replication-associated protein, triple gene block protein 1, triple gene block protein 2, triple gene block protein 3, and coat protein genes, complete cds.
ACC No: AY366209
Dated: 2004-04-27 | Length: 6653 | CRC: 2016222488
!!NA_SEQUENCE 1.0
ID AY366209 standard; genomic RNA; VRL; 6653 BP.
XX
AC AY366209;
XX
SV AY366209.1
XX
DT 27-APR-2004 (Rel. 79, Created)
DT 27-APR-2004 (Rel. 79, Last updated, Version 1)
XX
DE Opuntia virus X strain CC10 replication-associated protein, triple gene
DE block protein 1, triple gene block protein 2, triple gene block protein 3,
DE and coat protein genes, complete cds.
XX
KW .
XX
OS Opuntia virus X
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus.
XX
RN [1]
RP 1-6653
RX PUBMED; 15098106.
RA Koenig R., Pleij C.W.A., Loss S., Burgermeister W., Aust H., Schiemann J.;
RT "Molecular characterisation of potexviruses isolated from three different
RT genera in the family Cactaceae";
RL Arch. Virol. 149(5):903-914(2004).
XX
RN [2]
RP 1-6653
RA Koenig R.;
RT ;
RL Submitted (12-AUG-2003) to the EMBL/GenBank/DDBJ databases.
RL Institut fuer Pflanzenvirologie, Mikrobiologie und Biologische Sicherheit,
RL Biologische Bundesanstalt fuer Land- und Forstwirtschaft, Messeweg 11,
RL Braunschweig D-38104, Germany
XX
FH Key Location/Qualifiers
FH
FT source 1. .6653
FT /db_xref="taxon:253702"
FT /mol_type="genomic RNA"
FT /note="previously Cactus virus X"
FT /organism="Opuntia virus X"
FT /strain="CC10"
FT CDS 79. .4746
FT /codon_start=1
FT /note="ORF1"
FT /product="replication-associated protein"
FT /protein_id="AAR11547.1"
FT /translation="MARVREVYSSFSDPSLKAIIQDEAYKAIQTQMRQATVVNPYALST
FT DAADALENLGIITNPYSIQLHTHAAAKAIENDLYNTVAYHLPKEPVTFYYMKPGKLGKF
FT RRGPQHKDKFINSLFEPKDIARYPEETVVKHLEESPCSTSNAFMGDTLHFFKPEQLMTL
FT FRLSPKLKTLYATLVLPAEAMHELPSLHPHIYSLKYTKNHFIYMPGGHAGASYVHSREQ
FT LAWLLIGKLTQGNMQLTFQLLESKGANHLFIIQRMNMQTPPLRTFGVGAPYVLLPKIFL
FT PSEHNMQQPIPTAFATKMFLYCKSLKEVSTRDLYAKVRQLLAEKDLEKYSPRQMVHMIN
FT YFFLIGKLDSVTCFESTLTGSALRQFFKPLIVWWQYFKQKITGDHEFVQLLKALEWRKI
FT DLTYNVTECNTNQWWQLLRGKEPTIATDNEAFSDFWDPNSYNPLDKVDELSTEQLKAWD
FT FLQKQRNPTQEEFHKDPLETPTEGLEQHDSTTHEFAQADANPQTDQDSASNGLKQEESS
FT ADTATTGAADTPETSAGASQGTEKPKGPIVNAHGVIIEKFDCDKDPEYSWTDFLLFNLR
FT KVDKVGKRWVTLYSKRPEIKSYSYGNITHSAQAWPEALTAVCQNLSVDDFFDHCLFQVF
FT EASASIGLHQDDEALIAPDTEIVTLNFGSADLTTLDIKTGSKCFTPLNGTVKYSMPPGF
FT QKTHKHAVKSNSAKRISITFRKSVHCTEDLALPWTKWLPILKGAGFQGNKGQINPNDGA
FT LILPIMSIQKLPTLECSIPSLNQTLKQIHRLPTPFLPDPLRAKSFGSDVKNLRVGALLK
FT HQSKEWLDTFGRKTEIEPRQVALSVIHGVGGSGKSHAIQEWIRQNPEEEIVVILPTNEL
FT RLDWTRKIPKAPVYMFKTFEKALLQPAPSVVVIDDYTKIPAGFIEAYIVTNPSLHTLII
FT TGDSRQSFHHETNEQALTAKLAPFSEIAQQYCRYYLNATHRNKQDLANMLGVYSEVAGT
FT TSITMSPTVIPDRHLLVPSLYKKMAYSEMGHKVSTYAGCQGLTAPSVQILIDNDTPMCS
FT QQVMYTALSRAVHAIHFINTGVDNDAFWTKLAATPYLAAFLRLVREDALKESKVEEPQP
FT QADPNPPTHFPVENETTFSDHIVDNMTDEHSREIFSQSTGFSNCVQTEDPVVQMFPHQQ
FT AKDETLFWATVEARLKITSPEKNFTEFISKKHLGDVLFENYKLAMGLPKEPIAFDQKLW
FT EVCADEVQKTYLSKPINMIQNGQNRQSPDFDPKAISLFLKSQWVKKVEKLGQPRIKAGQ
FT TIASFQQEAVMLYGTMARYMRRVREVFQPANIFINCERTPEDMDRWAREHWNFNRLSYA
FT NDYTAFDQSQDGAMLQFEVLKARHHCIPEEFIEGYIDLKCSSKTFLGILKIMRLTGEGP
FT TFDANTECNIAFAHTMLRIPKNAAQLYAGDDCAFDISPDQKPSFKKIETEISLKAKPSF
FT KRQIKGEWAEFCGMLITPLGVVKDPIKTWAALQLAKRLGQMKDVRDSYERDVCLAYQHK
FT DKLHEIFSEEQSKAHQLTVREIIRHKGGKVFSTYD"
FT CDS 4746. .5435
FT /codon_start=1
FT /note="ORF2"
FT /product="triple gene block protein 1"
FT /protein_id="AAR11548.1"
FT /translation="MENLVAMLTANDYTRTDRAFSKPLIVHAVAGAGKTSLIRRFMKEN
FT AQVSAQTHGTPDPPNLTRKMITKVTAPKSNHFNILDEYCAFPLKGSWDACFADPLQHPD
FT FAQEPHFIKETTHRFGPETCELIKSLGIPICPLGPSQVLTIKGLFEGEIFGKVICLDSD
FT IAALACRHRIPISQPKQTIGLEFPTVTVLSSLPLSQVEDVTGVYISLTRHTKELHVRAP
FT PETHSTA"
FT CDS 5398. .5730
FT /codon_start=1
FT /note="ORF3"
FT /product="triple gene block protein 2"
FT /protein_id="AAR11549.1"
FT /translation="MSGHPLRLTPPPDYSKAVTSLTIGLTLVLAVYAVTRSTLPTVGDS
FT SHSLPHGGFYKDGTKTVKYLGPSDNHSKHIPLLAVLVIIALIYASSFLSSGRRTGTCSS
FT CGTAHG"
FT CDS 5660. .5851
FT /codon_start=1
FT /note="ORF4"
FT /product="triple gene block protein 3"
FT /protein_id="AAR11550.1"
FT /translation="MLVLSFLVGAALGLALLAALHTGENKGCLIQFNGHSTIVSNCQDV
FT KDLAAVINAINDRLSFSN"
FT CDS 5863. .6552
FT /codon_start=1
FT /note="ORF5"
FT /product="coat protein"
FT /protein_id="AAR11551.1"
FT /translation="MASTPQTSSTPVQSSAARNPINNHGGPFDSLTTDQINSLSLTVTS
FT SLLPSTQALQAIANAFTSLGASQAQVTNLALELVNYCYDNGSSPETLFRGNSSIGVPFS
FT KLASIISEHATFRQFARYFAPLIWNARISLNKPPAAWEAWHYNEEERFAAFDFFDGVLN
FT SAALMPKDGLIRKPTRAEINASQTNRNVHLFENKAQKSRYLSNSALVTKGIADSEGPRV
FT QFLPGPE"
XX
SQ Sequence 6653 BP; 1937 A; 1911 C; 1407 G; 1398 T; 0 other;
AY366209 Length: 6653 May 5, 2004 12:52 Type: N Check: 1011 ..
1 gaaaacccaa ccctaaccaa cctcaaccac caacatcctt aacgaaatta
51 agctcccagt aaggatatat tccgcgggat ggctcgtgtg cgcgaggttt
101 actcttcctt ctccgacccc tctctgaaag ctatcattca ggatgaggcc
151 tacaaggcca ttcagaccca aatgagacaa gctactgtgg tcaacccata
201 cgcactctcc accgatgcgg cggacgcatt ggaaaacctc ggaatcatca
251 ccaaccccta ctcaatccaa ctccacactc atgctgcggc gaaggcaatt
301 gaaaacgatc tatacaatac cgtggcctac cacttgccca aagagccagt
351 tactttctac tacatgaaac ctgggaaact agggaaattc agaagagggc
401 cccagcacaa ggacaaattc atcaattcac tgtttgagcc caaagacatt
451 gcaaggtacc ccgaggagac cgtcgtcaag catcttgaag aaagtccctg
501 ctccacctca aacgcattta tgggggacac tctacacttc ttcaagccag
551 agcaactgat gaccctcttc aggctaagtc cgaaattgaa aacactgtat
601 gcaaccctag ttctaccagc ggaggcaatg catgagttac catcacttca
651 cccccacata tactccctca agtacacaaa aaaccatttt atctacatgc
701 ccgggggaca cgctggagct tcctatgtac attcaagaga acagctagcc
751 tggcttctga ttggaaagct cacccaaggc aacatgcaac taaccttcca
801 gctcctcgaa tccaaaggcg caaatcactt gttcatcatt cagagaatga
851 acatgcaaac tccaccactg agaacatttg gagtcggcgc cccctacgtt
901 cttctaccaa aaatcttctt gccatcggag cacaacatgc agcagcccat
951 cccaactgcc ttcgcaacga agatgtttct ctactgcaaa agcctcaagg
1001 aagtatcaac cagagacctc tatgccaagg tgaggcagct tcttgcagaa
1051 aaagatctgg agaaatattc cccacgccag atggtgcaca tgatcaatta
1101 cttctttctg ataggcaagc tcgactccgt aacatgtttt gagtcgacac
1151 ttacaggaag tgcactgaga caattcttca aaccattgat cgtctggtgg
1201 cagtacttca agcaaaaaat tactggggac catgaattcg tgcaactgct
1251 aaaagccttg gaatggagga agattgatct cacctacaat gtcaccgaat
1301 gcaacacgaa tcagtggtgg caactcctcc gaggcaaaga acccaccatt
1351 gctactgaca atgaggcttt cagcgacttc tgggatccca actcatacaa
1401 cccactggac aaagtcgatg aactgagcac agagcaactc aaagcctggg
1451 acttccttca aaaacagaga aatcctactc aagaggaatt ccacaaagat
1501 ccgctcgaaa cgcccactga agggcttgag caacatgaca gcaccactca
1551 tgagtttgca caagccgatg caaacccaca aaccgaccag gactcggcaa
1601 gtaatgggct gaagcaagag gagagcagtg ctgacactgc cacaaccggc
1651 gctgcagaca cccctgagac ctccgcgggt gcatcacagg gcacagaaaa
1701 acctaagggt cccatcgtca acgctcatgg agtgataatt gaaaaattcg
1751 actgtgataa ggatccagaa tactcctgga ccgacttcct actcttcaac
1801 ctgaggaaag tcgacaaagt aggaaagaga tgggtcacgc tttactccaa
1851 aagacctgag atcaagagtt atagctatgg aaacatcacc cactctgcac
1901 aggcatggcc cgaggcactc acggcagtgt gccagaacct ctcagttgac
1951 gatttcttcg accactgcct ctttcaagta ttcgaagcct cggcatcaat
2001 cgggctgcac caggatgatg aagctctcat tgcacctgac actgaaattg
2051 tcacactcaa ctttgggagc gcagacctaa ccactctgga catcaaaact
2101 ggatccaagt gcttcactcc tttaaatggc acagtgaaat attcaatgcc
2151 gccaggcttc cagaagaccc ataagcacgc agtgaagtca aacagtgcta
2201 agagaatctc gataaccttc aggaagagcg tgcactgcac cgaagacctg
2251 gccctcccat ggaccaaatg gctccctatt ctgaaagggg ctggctttca
2301 aggaaacaag ggacagatca acccgaatga tggagcactg attctaccaa
2351 ttatgagcat ccagaaactg ccaacactgg aatgcagcat tccaagcctg
2401 aatcagactc tcaaacagat ccatcgtctg cccaccccct ttcttcctga
2451 ccccctgcga gcaaagtctt tcggttctga cgtgaagaac cttcgtgttg
2501 gggccctact caagcatcaa tcaaaggaat ggctggacac cttcggacgc
2551 aagactgaga ttgaacccag acaagtggct ctgtccgtaa ttcacggtgt
2601 gggtggaagc ggcaaatctc atgcaattca ggaatggatc cgccagaacc
2651 cagaggagga aattgtggtg atactgccta ccaacgagct gagacttgac
2701 tggaccagaa agattccaaa ggcgcctgtc tacatgttca agacattcga
2751 gaaagctctc ctccaaccag ccccgtccgt ggttgtgatt gatgattaca
2801 caaagatacc ggcgggattc atcgaggctt acatagtcac caatccttca
2851 ctgcatactc tcatcatcac aggtgactcc aggcaaagct tccaccatga
2901 gacgaatgaa caggccctta ctgctaagct ggcacccttc tctgagatcg
2951 cacaacagta ctgcaggtac tatctgaatg caacccaccg caacaagcag
3001 gacttggcca acatgctcgg agtctactcc gaggttgcgg gaacaaccag
3051 catcacgatg agccccaccg taatacctga cagacacctc ttggttccct
3101 ccctatacaa gaaaatggcc tactctgaaa tggggcacaa ggtgtctacc
3151 tatgccggct gccaaggcct gacagcacca tcggtccaaa tcctgataga
3201 caatgacact cccatgtgct cccaacaggt tatgtacacg gcactgagca
3251 gggctgtcca cgcaattcac tttatcaaca caggagtgga caacgatgca
3301 ttctggacca agctggcagc caccccctac ctagctgctt ttctaaggct
3351 ggtcagggaa gatgcgctca aggagagcaa agtggaggaa ccacaacccc
3401 aagctgaccc aaacccaccc actcactttc ctgtggagaa tgaaacaact
3451 ttctccgacc acattgtcga caacatgact gacgagcact caagagaaat
3501 cttctcccag tcaactggct tctccaactg tgtgcaaact gaggaccccg
3551 tggtgcagat gttcccccac cagcaggcta aggatgaaac cctgttttgg
3601 gcaaccgtgg aagcaaggct caagatcacc tcccctgaga aaaacttcac
3651 cgagttcatc tctaagaaac atctcgggga cgtcctgttc gaaaactaca
3701 aactggccat gggactgccc aaggaaccaa ttgcctttga ccaaaaactc
3751 tgggaagtct gcgccgatga agtccaaaag acctacctgt ccaagcccat
3801 caacatgatc caaaatggac agaacaggca gtcccccgac ttcgacccca
3851 aggcaatttc actctttcta aaatcacaat gggtcaagaa agtagagaag
3901 ctcgggcaac cacgcatcaa ggccggacag accatcgctt ccttccaaca
3951 agaggcagtc atgctttacg ggacaatggc gaggtacatg cgaagagtcc
4001 gggaagtttt ccagccggcc aacattttca tcaattgcga aaggactcct
4051 gaggacatgg accgttgggc ccgcgagcat tggaatttta acagactaag
4101 ttacgccaat gactacactg cctttgatca gtcccaggac ggcgccatgc
4151 tacaatttga agtgctcaaa gctcgccacc attgcatccc agaggaattc
4201 atcgaaggtt acatcgacct aaaatgcagc tctaaaacat ttctcgggat
4251 tctgaaaata atgaggctca caggggaagg ccccacattt gatgccaaca
4301 ctgagtgcaa tatcgcattt gcacacacaa tgctgagaat accaaaaaat
4351 gcggcacaac tttatgcagg tgatgactgt gcctttgaca tctccccgga
4401 ccaaaaaccg agcttcaaga aaattgaaac ggagatttca ctaaaggcca
4451 agccaagctt caaacgacaa atcaaagggg aatgggcgga attctgcggc
4501 atgctgatca caccgctcgg agtggtcaaa gatcccatca aaacttgggc
4551 cgccctccaa ctggccaaga ggctcgggca gatgaaagac gtcagggaca
4601 gctacgaaag agatgtgtgc ctcgcctacc aacacaaaga caagctgcat
4651 gaaattttct cagaagagca atccaaggcc catcaattaa ccgttcgtga
4701 aatcatcaga cataaaggag gaaaggtttt ctcaacatac gactaatgga
4751 gaaccttgtg gccatgctaa ctgctaacga ctatactagg actgaccgag
4801 ccttctccaa acctctcatc gtgcatgcgg tggcgggtgc gggaaagact
4851 tcactaatta ggaggttcat gaaggaaaat gctcaggtgt cggcgcaaac
4901 tcatggaacc cctgaccccc caaacctcac caggaaaatg ataactaaag
4951 tgacggcgcc aaagtccaac cacttcaaca ttctggacga atattgcgct
5001 tttcctctca aaggcagttg ggatgcctgt tttgccgacc cgctacaaca
5051 tccagacttt gcgcaagagc cccatttcat caaggaaacg acgcatcgct
5101 ttggtccaga aacgtgcgaa ctgatcaaaa gcttgggaat cccaatttgt
5151 cccctcggac ccagccaggt gctcacaata aaaggtttat tcgaaggcga
5201 aatcttcggc aaagtcatct gcctcgactc tgacatagcg gctctcgctt
5251 gcaggcacag gatcccaatc agccaaccga agcagactat tggccttgaa
5301 ttcccaaccg tcactgtgct ctcatccctc ccactttcac aagttgagga
5351 cgtcacgggt gtctacatct cactcaccag gcacaccaaa gaactccatg
5401 tcagggcacc ccctgagact cactccaccg cctgactact caaaagcagt
5451 cacctcacta accataggac taacattagt attagctgtt tacgcagtaa
5501 ccagatcgac actcccaaca gtcggagact cttcacattc actaccacac
5551 ggaggattct acaaggacgg aacgaaaacc gtgaagtact tgggaccttc
5601 ggacaaccac tccaagcaca ttcctctact agctgtcctc gtgatcatcg
5651 cactaatcta tgctagttct ttcctttcta gtgggcgccg cactgggact
5701 tgctcttctt gcggcactgc acacgggtga aaataaaggc tgcttgatac
5751 agttcaacgg acactccacc attgtctcca actgccagga tgtcaaggat
5801 ctagctgctg taattaacgc catcaatgac cgcttaagtt ttagcaactg
5851 actgaaaatc aaatggcctc cactccacag accagctcca ctccagtcca
5901 atcttctgcc gctcgaaacc caatcaataa ccatggtggc ccattcgact
5951 cgctaaccac tgaccagatc aattctctct ccctcactgt aactagctcc
6001 ctcttaccta gcactcaggc cctgcaggca attgccaatg ccttcaccag
6051 tttaggagcc agccaagccc aagtcacaaa tctagctctc gagttggtca
6101 actactgcta tgacaatggc tcttctccgg aaacgctctt cagaggaaac
6151 tcctccattg gtgttccctt ttcaaaactg gcttccatca tcagtgaaca
6201 cgcgactttt aggcagtttg cgcgttactt tgctccactc atctggaacg
6251 caagaatctc cctcaacaaa cctccagcag cttgggaggc ctggcactac
6301 aacgaagagg aaagattcgc tgctttcgac ttctttgacg gagtcctcaa
6351 ctcagctgca ctcatgccaa aagacggact cattcgaaag cctacacgcg
6401 ccgaaatcaa tgccagccag accaaccgca atgttcacct gtttgaaaac
6451 aaggctcaga agagcagata tctgtccaac tcggccttag tgaccaaagg
6501 aatagcggac tctgaaggtc caagagtgca gttcctacca ggtcctgaat
6551 aagacactac tccaggctct agcggtagcc tccccctggg ttccaactgc
6601 gtctatcacc ataacttaat atggctagct ttctgtttta atgcagcctt
6651 cag