Sequence of DPV Papaya ringspot virus

Papaya ringspot virus P isolate Mex.TbC-5.2-98 proteinase P1 (P1) gene, partial cds.

ACC No: AY438011

Dated: 2003-11-09 | Length: 1641 | CRC: -1803965456

                !!NA_SEQUENCE 1.0
ID   AY438011   standard; genomic RNA; VRL; 1641 BP.
XX
AC   AY438011;
XX
SV   AY438011.1
XX
DT   09-NOV-2003 (Rel. 77, Created)
DT   09-NOV-2003 (Rel. 77, Last updated, Version 1)
XX
DE   Papaya ringspot virus P isolate Mex.TbC-5.2-98 proteinase P1 (P1) gene,
DE   partial cds.
XX
KW   .
XX
OS   Papaya ringspot virus P
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus; Papaya ringspot virus.
XX
RN   [1]
RP   1-1641
RA   Noa-Carrazana J.C., Ruiz-Castro B.S., Silva-Rosales L.;
RT   "Incidence and distribution of papaya mosaic virus and papaya ringspot
RT   virus in papaya plants in Mexico";
RL   Unpublished.
XX
RN   [2]
RP   1-1641
RA   Noa-Carrazana J.C., Ruiz-Castro B.S., Silva-Rosales L.;
RT   ;
RL   Submitted (14-OCT-2003) to the EMBL/GenBank/DDBJ databases.
RL   Ing. Genetica, Cinvestav-Irapuato, Km 9.6 Libramiento Norte carr.
RL   Irapuato-leon, Irapuato, Gto 36500 Apt. Postal 629, Mexico
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1641
FT                   /country="Mexico:Tabasco, Comacalco"
FT                   /db_xref="taxon:12206"
FT                   /mol_type="genomic RNA"
FT                   /organism="Papaya ringspot virus P"
FT                   /strain="PRSV-P"
FT                   /isolate="Mex.TbC-5.2-98"
FT   gene            1. .>1641
FT                   /gene="P1"
FT   CDS             1. .>1641
FT                   /codon_start=1
FT                   /gene="P1"
FT                   /product="proteinase P1"
FT                   /protein_id="AAR12184.1"
FT                   /translation="MSSLYTLRAAAQYDRRLESRKGVGWIEHKLERKGDKGNTHYCSEF
FT                   DISKGAKILQLVQIGSAEVGRTFLEGNRFVRANIFEIIRKTMVGRLGYDFESELWVCHN
FT                   CDRTSEKYFKKCDCGEKYYYSERNLMKTMNDLTYQFDMTPSEINSVDFDYLADAVDYAE
FT                   RSVQKSQVPEPVELVMVEPIAASEEGTLMVSEPEVVPATTKIEDTWMIQIGEIPVPLVV
FT                   IKETPVISGVNGTLNSTGFSLEAEITKLVEKEVSHEEVKEAVHLALEVGNEIAKKKPEL
FT                   KLIPYWSASLELHKRIRKHKEHAKIAAIQVQKEREKNPKIFSILESEAQLKIQKRSQTV
FT                   VCDKRGTLNGKPGKVTRRVDSCNKRVTLLSLRFTVILVVNLDILNLHSSGIKIATSKKV
FT                   HKPRRLSRIVGNNKINYVMKHLSEHIIERSIPVELVTKRCKRRILQKKGRSYVQLRHMD
FT                   GIRARQDVSSSPDMERLFTQFCKFLVGHKPLKSESLTYGSSGLIFKPKFAANVGRYFGD
FT                   YFVVRGRLEGKLFDGRSKLARSIYARMEQY"
XX
SQ   Sequence 1641 BP; 514 A; 297 C; 413 G; 417 T; 0 other;

AY438011  Length: 1641  November 25, 2003 09:13  Type: N  Check: 1885  ..

       1  atgtcttctt tgtatacttt gcgagcagca gctcaatacg ataggaggtt
      51  ggagagtagg aaaggtgttg gctggatcga gcacaaactc gagaggaaag
     101  gggataaagg aaatactcat tattgtagtg agtttgacat tagcaagggt
     151  gccaaaattc tgcaattggt gcaaatcggt agcgctgaag ttggaaggac
     201  cttcctggag ggtaacagat ttgtccgtgc gaacatattt gagatcatcc
     251  ggaaaaccat ggttggtcgt ctaggatatg atttcgagag tgaactgtgg
     301  gtctgtcaca actgcgacag aacttctgaa aaatacttca agaaatgtga
     351  ctgcggggaa aaatattatt actctgaaag aaacctgatg aaaacaatga
     401  acgacctgac gtatcaattt gacatgacac cgtcagagat caactccgtc
     451  gattttgatt accttgctga tgcagtggat tatgctgaac ggtcagttca
     501  gaaatctcaa gttccggaac ctgtggaact tgtaatggtg gaaccaatcg
     551  cggctagtga ggaaggtact ctaatggttt ctgaaccaga agttgtgcct
     601  gcaactacca aaattgaaga tacatggatg atacagattg gggaaattcc
     651  tgttccactt gtcgtcatca aagagacgcc ggttatcagt ggtgtgaacg
     701  gaactttgaa ctcaactggt ttctcacttg aggctgagat tacaaaactg
     751  gtggagaagg aagtctctca cgaagaggtt aaagaagcag tacatctggc
     801  actcgaagtt ggtaacgaga ttgctaagaa gaagcctgaa ctcaagctaa
     851  taccctactg gagtgctagc cttgagttgc acaagagaat tcgtaagcat
     901  aaggagcatg ctaagattgc agcaattcaa gttcagaagg aaagagaaaa
     951  gaacccaaag atattctcaa ttctagagtc cgaggctcaa cttaaaatcc
    1001  agaagagaag tcaaactgtg gtctgtgata aaagaggcac acttaatgga
    1051  aaacccggca aggtcaccag aagagtagac tcatgcaaca agcgagtgac
    1101  tttgttgtca ctcagattca ctgtgatttt ggttgtgaac ctcgatattc
    1151  tgaaccttca ctcttctggc attaaaatag cgacatctaa gaaggtccac
    1201  aaaccgcgca ggctatcgag gattgttggt aataacaaga taaattatgt
    1251  catgaaacat ctaagtgaac acattatcga aagaagcatt cctgtggagc
    1301  ttgttacaaa gcgatgcaag agaaggattc ttcagaagaa aggtagaagc
    1351  tatgtgcagt tgaggcacat ggatggcatt cgtgcacgac aagatgtgag
    1401  cagctcgccc gatatggagc ggttattcac gcaattttgc aaatttttag
    1451  ttgggcacaa accactcaaa tccgaaagtc tgacgtatgg ttctagtggt
    1501  ctgattttta agccaaagtt tgccgccaat gtggggcgat attttggtga
    1551  ctatttcgtt gttcgaggac gtcttgaagg taagctattt gatggtagat
    1601  caaaactagc gagatcgatc tatgccagga tggagcaata c