Sequence of DPV Tomato leaf curl New Delhi virus
Tomato leaf curl New Delhi virus segment DNA B, complete sequence.
ACC No: AY438563
Dated: 2003-12-29 | Length: 2693 | CRC: 1790041466
!!NA_SEQUENCE 1.0
ID AY438563 standard; genomic DNA; VRL; 2693 BP.
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AC AY438563;
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SV AY438563.1
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DT 29-DEC-2003 (Rel. 78, Created)
DT 29-DEC-2003 (Rel. 78, Last updated, Version 1)
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DE Tomato leaf curl New Delhi virus segment DNA B, complete sequence.
XX
KW .
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OS Tomato leaf curl New Delhi virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
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RN [1]
RP 1-2693
RA Sivalingam P.N., Malathi V.G., Varma A.;
RT "Nucleotide sequence of DNA B of Tomato leaf curl New Delhi virus-AVT1
RT isolate from New Delhi";
RL Unpublished.
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RN [2]
RP 1-2693
RA Sivalingam P.N., Malathi V.G., Varma A.;
RT ;
RL Submitted (11-OCT-2003) to the EMBL/GenBank/DDBJ databases.
RL Division of Plant Pathology, Indian Agricultural Research Institute, Pusa
RL Road, New Delhi, Delhi 110012, India
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FH Key Location/Qualifiers
FH
FT source 1. .2693
FT /country="India:New Delhi"
FT /db_xref="taxon:223347"
FT /mol_type="genomic DNA"
FT /organism="Tomato leaf curl New Delhi virus"
FT /isolate="AVT1"
FT /segment="DNA B"
FT gene 441. .1247
FT /gene="BV1"
FT CDS 441. .1247
FT /codon_start=1
FT /gene="BV1"
FT /product="nuclear shuttle protein"
FT /protein_id="AAR84223.1"
FT /translation="MAFPSPYATPRRSGYPSNRTYTGKRSFRLWKSRKSQNWKRYGSTH
FT PTSRSPTELFGDPISKQYTRKEICETQEGSEYVLHNNRCVTSYVSYPAKTRTGTNNRVR
FT SYIKLKSLNISGTFAVRTSDMMTEVGQTNGLYGVMSVVVVRDKSPKIYSATQPLIPFVE
FT LFGSVNACRGRVKVAERHHERFVLLNQTSIVVNTPHSNAIKKFCIRNCIPRTYTTWVTF
FT KDEEEDSCTGRYSNTLRNAIILYYVWLSDVPSQVDLYSNVILNYIG"
FT gene complement(1304. .2149)
FT /gene="BC1"
FT CDS complement(1304. .2149)
FT /codon_start=1
FT /gene="BC1"
FT /product="movement protein"
FT /protein_id="AAR84224.1"
FT /translation="MSIGNEGLGLGVGGYIQSERVEYALTNDATEVTLSFPSMFEQKIS
FT QLRNKCMKIDHVVLEYRNQVPINAVGHVVIEIHDMRLTEGDTKQAEFTIPIKCNCNLHY
FT YSSSYFSLKDKNPWRVEYRVENANVVNGVHFCKMLGKLKLSSAKHSTDVEFRPPKIEIQ
FT TKEFTVNDIDFWSVGSKPQTRRLVDGSRLRGHSSRSLRVPYLAIGPNESWASRSEIGHS
FT SVMSRPYKNLSGLDDSAIDPGPSASQAGSITREEIADIITKTVEKCILSNVTAPMSKDV
FT "
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SQ Sequence 2693 BP; 764 A; 597 C; 524 G; 808 T; 0 other;
AY438563 Length: 2693 January 6, 2004 09:02 Type: N Check: 6504 ..
1 accgaaaggc cgcgaaaatt tttcccctta tcctgaccgt tgatgcgtaa
51 tcattgcgcc cccttatccg cacgattttg aacacgtgta tcccactagc
101 agactttatg caattaaatg tctggtatct gtgtctacaa tgcatatgtg
151 gtccccatat ttagtgtcgt acttcttgtt aatgcgcatg aggtcccccc
201 gcactatgta atgttatcat tacaaagtgg agtgcattcc tgctgtccca
251 attttgaacg gttgagatca aaattaatat gttccgaaca tgccagtcgt
301 ccgatcttat gagatatgct ttaattcaaa caatacttgt ttgaatttta
351 tcgacccctt aaaatactaa tttacaaaac tgctacatat atgacattcc
401 ttcgtttatg tcgttgccac acatttctta tcccagctaa atggcttttc
451 cttctcctta tgccacacct cgtcgttccg gttacccttc caatagaaca
501 tacaccggaa agaggagttt ccgtttgtgg aagtcccgga agtcccagaa
551 ctggaagcgc tatggcagta ctcatcccac gtcacgttct ccaactgaac
601 tatttggaga tccaatctcc aaacaatata cgcgtaagga aatctgtgaa
651 actcaggagg ggtcggagta tgtcctccat aacaatcgtt gcgtgacgtc
701 atatgtatca tatcctgcaa agacaagaac tggaacgaac aaccgcgttc
751 gttcttatat caagctgaag agtctcaaca tatctgggac atttgctgtg
801 cgcacatcgg acatgatgac cgaagttggg caaacaaatg ggctatacgg
851 agtgatgtct gtagttgtag tccgtgataa atctccaaag atttattctg
901 cgacgcaacc gttaataccg tttgttgagc tatttggatc tgttaatgct
951 tgcagaggaa gggttaaagt ggcagaacgc caccatgaac gttttgtact
1001 gcttaatcaa acatccatcg tcgtcaatac cccacattct aacgctatca
1051 agaaattctg cattcgcaac tgcatcccaa gaacttacac aacttgggta
1101 acgttcaagg acgaagaaga agatagctgt actggacgat attcaaacac
1151 ccttagaaat gcaattatat tatattatgt atggttaagc gatgtaccct
1201 cacaggtcga tttgtatagc aatgtaattc ttaattacat tggatgatgt
1251 atgaaaatgc actagaaatg tgttatttat taataaattt ggcttaaaat
1301 ttattacacg tcctttgaca ttggagcagt tacattagat aatatacatt
1351 tctctactgt ctttgtaatt atatcagcaa tctcttccct tgtgatactc
1401 cccgcttgtg aagccgacgg acctggatcg attgccgaat cgtccaatcc
1451 gctcaggttt ttatatggtc tgctcatgac ggacgaatgt ccgatctccg
1501 atctgcttgc ccatgattcg ttcggaccta ttgccaaata tggtacacgt
1551 aacgatctcg aactatgtcc ccttaatcgt gaaccatcga caagacgcct
1601 tgtttgtggt ttggaaccga cagaccaaaa atcaatatca tttactgtga
1651 actcctttgt ctgtatttcg atctttggtg gtcggaattc gacatcagtc
1701 gaatgttttg ccgaagacag cttcaatttc cctagcatct tacagaagtg
1751 cactccattc acgacgtttg cgttctccac tctatattca actctccaag
1801 gattcttatc cttgagagag aagtatgatg aagagtagta atgcaggttg
1851 caattgcatt tgattggaat tgtaaattct gcttgttttg tgtccccctc
1901 cgtcaatctc atgtcgtgta tctctatcac gacatgacca acagcattaa
1951 ttggtacctg attgcgatat tcgaggacga cgtgatctat cttcatgcat
2001 ttattcctca actggctaat tttctgctca aacatcgacg gaaatgacaa
2051 ggtgacttcc gtagcatcat ttgtgagtgc gtactctacg cgctcagact
2101 gtatataccc acctactccc agacccaacc cttcatttcc tattgacata
2151 ttgtccgcgc agcggaacac ccaccagaac gaaggaagat ggacgtcgaa
2201 gcaagaaacc ctaacgaaga agaaacccta ccaaagaacg aagttgtttg
2251 gcaaagaaag aaggtagatg gttttataat tgcgttacat gtgatgtcta
2301 tttcatgaca aataccatca aatgaacggc acatatttct ctacgaaaaa
2351 ggtaatgtgc ctgcgtatcg cattttactg agtgcttgtg tatatgggaa
2401 gcccaattta ttttaattgg gctgcagtac aatgacagaa gaagcccatg
2451 aaactggccc aacatgtaag tccatatcca aaaaagacat ggcaggtggg
2501 ttgttggttc tatataaagt agagagaagt tggagtttct ctctctagaa
2551 ctcatctggt gtctctcaac tttctctatg taattggtgt ctggagtccc
2601 atatataggt aagacaccat atggcataat tgtaattctg gaaagaaaat
2651 tactttaact caaaatccct aaagcggcct ttcgtataat att