Sequence of DPV Sweet potato virus 2
Sweet potato virus Y isolate Louro1 polyprotein gene, partial cds.
ACC No: AY459604
Dated: 2007-03-11 | Length: 1411 | CRC: -1560739614
ID AY459604; SV 1; linear; genomic RNA; STD; VRL; 1411 BP.
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AC AY459604;
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DT 01-DEC-2004 (Rel. 82, Created)
DT 11-MAR-2007 (Rel. 91, Last updated, Version 3)
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DE Sweet potato virus Y isolate Louro1 polyprotein gene, partial cds.
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KW .
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OS Sweet potato virus Y
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC Potyvirus; unclassified Potyvirus.
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RN [1]
RP 1-1411
RX PUBMED; 17136503.
RA Ateka E.M., Barg E., Njeru R.W., Thompson G., Vetten H.J.;
RT "Biological and molecular variability among geographically diverse isolates
RT of sweet potato virus 2";
RL Arch. Virol. 152(3):479-488(2007).
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RN [2]
RP 1-1411
RA Ateka E.M., Barg E., Njeru R.W., Thompson G., Vetten H.J.;
RT ;
RL Submitted (06-NOV-2003) to the EMBL/GenBank/DDBJ databases.
RL Institute for Plant Virology, Microbiology and Biosafety, Federal
RL Biological Research Center for Agriculture and Forestry, Messeweg 11/12,
RL Braunschweig 38104, Germany
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FH Key Location/Qualifiers
FH
FT source 1. .1411
FT /organism="Sweet potato virus Y"
FT /isolate="Louro1"
FT /mol_type="genomic RNA"
FT /country="Portugal"
FT /db_xref="taxon:225962"
FT CDS <1. .1197
FT /codon_start=1
FT /product="polyprotein"
FT /db_xref="InterPro:IPR001205"
FT /db_xref="InterPro:IPR001592"
FT /db_xref="UniProtKB/TrEMBL:Q5QIX4"
FT /protein_id="AAS37684.1"
FT /translation="AWVLDQAPYCELARTGKAPYIAETALKALYTCVEPSAEDLSEYAR
FT VLNLMYDDAIETNNCEPVYHQSGTEETKDAGTPTPAKSVKTRTGQTQPLKAPEGSTDPT
FT DPPPPTVEEIIEEETPAQKALREARGKQPATQPSYTYGRDTGPRSPKQVTTTSGVRDRD
FT VNAGTVGTFTVPRLQITSSKKRLPIVDGRPVINLDHLAVYDPEQTNLANTRSTQEQFKA
FT WYEGVKGDYGVSDAEMGILLNGLMVWCIENGTSTEYNGMWVMMDGEEQVTYPIKPLLDH
FT AVPTFRQIMTHFSDIAEAYIEKRNRIKAYMPRYGLQRNLTDMSLARYAFDFYELHSNTP
FT VRAREAHMQMKAAALKNAQNRLFGLDGNVSTQEEDTERHTTTDVTRNIHNLLGMRGVQ"
FT mat_peptide <1. .198
FT /product="NIb protein"
FT /inference="non-experimental evidence, no additional
FT details recorded"
FT mat_peptide 199. .1194
FT /product="coat protein"
FT /inference="non-experimental evidence, no additional
FT details recorded"
FT 3'UTR 1198. .1411
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SQ Sequence 1411 BP; 479 A; 279 C; 324 G; 329 T; 0 other;
ay459604 Length: 1411 11-MAR-2007 Type: N Check: 4039 ..
1 gcatgggttt tggatcaggc accgtattgt gaactggcta gaacgggcaa
51 agcaccatat atagctgaaa cagcattaaa agctctgtac acatgtgtgg
101 agccatcagc tgaggactta tctgagtatg cccgagtttt aaatctcatg
151 tatgatgatg ccatagagac aaataattgt gagccagtct accatcagtc
201 aggcactgaa gaaacaaaag acgctggaac cccaacacca gcaaaatcag
251 ttaagacaag aacaggacaa actcaaccgc ttaaagcacc agaagggagc
301 acggatccaa cagatccacc acctccaaca gttgaagaga taattgaaga
351 agaaacacca gcacaaaaag cattgaggga agcccgtggc aagcaaccag
401 caacacaacc ctcatacact tatgggcgag acacaggacc acgtagccca
451 aagcaagtta caacaacaag tggagttagg gatagagatg ttaacgctgg
501 aacagtaggg acgtttacag ttccaagact tcaaattaca tcaagcaaga
551 agagattgcc aatagttgac ggacgtccag taatcaactt ggatcacttg
601 gcagtttacg atccagagca aacaaatctt gcaaatacca gatcaacaca
651 agaacagttt aaggcatggt atgaaggtgt gaagggtgat tatggggtat
701 ctgatgctga aatgggcata ctccttaatg gcctcatggt ttggtgtatt
751 gagaatggta catccaccga atataatgga atgtgggtga tgatggacgg
801 agaagaacaa gtaacttatc caataaaacc tctattggat catgctgtcc
851 ccacatttag acagataatg acacacttca gcgacatagc tgaagcgtac
901 attgaaaaga gaaacaggat aaaggcctat atgccaaggt atggcctaca
951 gaggaatttg actgatatga gtcttgcgcg gtatgcattt gatttctatg
1001 aactccactc aaacacacca gtaagagcaa gggaggcaca tatgcaaatg
1051 aaagcagcag ctttaaagaa tgcacagaac cgcctgtttg gtttggatgg
1101 aaacgtctcc acgcaagaag aagacacgga gaggcataca acaactgatg
1151 ttacaagaaa tatacataac ctgttaggaa tgagaggtgt gcagtaaaca
1201 atatattgct cgtactttta atttcagttg gtctttaatt taaattcgtg
1251 tctttcagtc ccgaagagtg ttggttgtgt gtagtaacta tgtgtggttg
1301 taccaccgtt gctacatata agaaaacctc tttctattac gtatcataag
1351 ggactcttaa aagtgagtct ttgactcgta agaaaagcct ttttggttcg
1401 tgatcgagca c