Sequence of DPV Apple mosaic virus

Apple mosaic virus isolate C3a capsid protein gene, complete cds.

ACC No: AY542541

Dated: 2005-10-01 | Length: 672 | CRC: -1719243694

                !!NA_SEQUENCE 1.0
ID   AY542541   standard; genomic RNA; VRL; 672 BP.
XX
AC   AY542541;
XX
SV   AY542541.1
XX
DT   02-MAR-2005 (Rel. 83, Created)
DT   01-OCT-2005 (Rel. 85, Last updated, Version 3)
XX
DE   Apple mosaic virus isolate C3a capsid protein gene, complete cds.
XX
KW   .
XX
OS   Apple mosaic virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Bromoviridae;
OC   Ilarvirus.
XX
RN   [1]
RP   1-672
RA   Petrzik K.;
RT   "Capsid protein sequence gene analysis of Apple mosaic virus infecting
RT   pears";
RL   Eur. J. Plant Pathol. 111:355-360(2005).
XX
RN   [2]
RP   1-672
RA   Petrzik K.;
RT   ;
RL   Submitted (06-FEB-2004) to the EMBL/GenBank/DDBJ databases.
RL   Department of Plant Virology, Institute of Plant Molecular Biology, AS CR,
RL   Branisovska 31, Czech Budejovice CZ-370 05, Czech Republic
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .672
FT                   /country="Belgium"
FT                   /db_xref="taxon:12319"
FT                   /mol_type="genomic RNA"
FT                   /virion
FT                   /organism="Apple mosaic virus"
FT                   /isolate="C3a"
FT   CDS             1. .672
FT                   /codon_start=1
FT                   /db_xref="GOA:Q5DQQ2"
FT                   /db_xref="InterPro:IPR002681"
FT                   /db_xref="UniProtKB/TrEMBL:Q5DQQ2"
FT                   /note="CP"
FT                   /product="capsid protein"
FT                   /protein_id="AAT11878.1"
FT                   /translation="MVCKYCNHTHPGSCARCKWCCGTNRPAPLMQEVARAQANPNKGKN
FT                   PVRGHPVKGGPSVRRTSWEVRGPNVEPKIPKGHRVLSSREVTAMVEGKFVNIDFADVFR
FT                   DLLEKDLKVYTFIIRVNSLSSNGWIGLVEDYDESNPKGPNPMDRKGFKKDQPRGWQWEA
FT                   PPNTTFDDFVRKFRLVLEFKTNFAAGAKVFMRDLYVITSELPPVQIPTNALLIDEDLLE
FT                   L"
XX
SQ   Sequence 672 BP; 182 A; 134 C; 192 G; 164 T; 0 other;

 AY542541  Length: 672  October 4, 2005 08:40  Type: N  Check: 8706  ..

       1  atggtctgca agtactgtaa tcacactcac cctggatctt gcgctagatg
      51  caagtggtgt tgcggcacga atagacctgc acctctgatg caagaagttg
     101  ctcgagccca agcgaacccg aataagggta agaaccccgt gaggggtcat
     151  cccgtgaagg gaggtccatc cgtgaggagg acatcttggg aggttagggg
     201  cccgaatgtt gaaccgaaaa ttcctaaagg tcacagggtc ctgagcagtc
     251  gagaagtgac tgccatggtt gaaggcaagt tcgtcaatat cgactttgcc
     301  gatgtctttc gtgatctttt ggagaaggat ctgaaggtgt ataccttcat
     351  aatccgagtg aacagtctgt cctctaatgg atggattggg ttagtggagg
     401  attacgatga gagtaatccg aaaggtccga atccgatgga ccgaaagggt
     451  ttcaaaaaag accaaccgag aggttggcag tgggaagccc ctccaaacac
     501  aacttttgat gacttcgtga ggaagtttag gttggtattg gagtttaaga
     551  cgaatttcgc cgctggcgcg aaagtcttta tgagggattt gtacgtgata
     601  acgagtgagt taccacccgt gcaaataccg acgaatgctc tacttatcga
     651  cgaagatttg ttagaattgt ga