Sequence of DPV Rice stripe virus

Rice stripe virus isolate JS-HZ-03 coat protein (CP) gene, complete cds.

ACC No: AY597379

Dated: 2004-05-10 | Length: 969 | CRC: 861246102

                !!NA_SEQUENCE 1.0
ID   AY597379   standard; genomic RNA; VRL; 969 BP.
XX
AC   AY597379;
XX
SV   AY597379.1
XX
DT   10-MAY-2004 (Rel. 79, Created)
DT   10-MAY-2004 (Rel. 79, Last updated, Version 1)
XX
DE   Rice stripe virus isolate JS-HZ-03 coat protein (CP) gene, complete cds.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-969
RA   Liao F.R., Wei T.Y., Wu Z.J., Lin Q.Y., Xie L.H.;
RT   "Genetic diversity of the coat protein gene of Rice stripe virus";
RL   Unpublished.
XX
RN   [2]
RP   1-969
RA   Liao F.R., Wei T.Y., Wu Z.J., Lin Q.Y., Xie L.H.;
RT   ;
RL   Submitted (12-APR-2004) to the EMBL/GenBank/DDBJ databases.
RL   Fujian Agriculture and Forestry University, Institution of Plant Viology,
RL   Kinshan, Fuzhou, Fujian 350002, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .969
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /organism="Rice stripe virus"
FT                   /isolate="JS-HZ-03"
FT   gene            complement(1. .969)
FT                   /gene="CP"
FT   CDS             complement(1. .969)
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAT06534.1"
FT                   /translation="MGTNKAATLADLQKAINDISKDALSYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGTNANAITLGRLAQLFPNVSHEVVRQISGVKMAVDSSDLGLTGCDNLLWDYV
FT                   PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLADKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTR
FT                   LYLAQQSKLMKILAEHTSKTASEVSGLVKEFFEDEAEGPDD"
XX
SQ   Sequence 969 BP; 232 A; 251 C; 195 G; 291 T; 0 other;

  AY597379  Length: 969  May 18, 2004 09:08  Type: N  Check: 8036  ..

       1  ctagtcatct ggaccttctg cctcatcctc gaagaactcc ttcaccaatc
      51  cgctgacttc agatgctgtc tttgaagtgt gctcagcaag gatcttcatc
     101  agcttgctct gttgagccaa gtacagcctt gtctgattcc cataagtgct
     151  gatcgtattg acagacatac cagccagcgc atcgaagatt gtggtcttca
     201  ctttcccatt ggtgatgaat tcatctaaga ccttctttct gccatcttcc
     251  ttcttcttgt cagccaggtt cttagacttg catgtgatga ccaggagacc
     301  agttgtgtac ttcatcatgt ctatgtcttt tgtcagacca cgctccttct
     351  tcttaccctc tggcatggtt tttttggtta tttggaagga gtgaatgatg
     401  tgcacaacaa acaaaatgtg acttagggag tgagttgtgc agtaaggagc
     451  tgtttcactc tccagtttga tatattgtgg aacatagtcc cacagtaagt
     501  tgtcacatcc tgttagtccc aggtcagaag aatccacagc catcttaaca
     551  ccagaaattt gtctcacaac ctcatgtgag acatttggga atagctgagc
     601  cagccttcca agtgtgatag cattggcatt tgttcccacc gaggacacta
     651  tcccatacct cgacaccaag gtcgaagcct ctgtgcttcc agctgccacc
     701  ttcactttct tagtgacatc tctcacaaag ccagtgcctc tcacatatct
     751  catggtgatg cacatagtca tatccttggc cagtgtgtca ccacctttgt
     801  ccttcaatat gccaatcaga gttgcagcat catagcctgc atactctatc
     851  tgaccagcaa aggtcacaac atcagcttta tgagcagtca ggtaagacaa
     901  cgcatctttg gagatgtcat tgattgcctt ctgcaaatca gctagagtgg
     951  ctgccttgtt ggtacccat