Sequence of DPV Rice stripe virus

Rice stripe virus isolate YN-CX-03-M5 coat protein (CP) gene, complete cds.

ACC No: AY597390

Dated: 2004-05-10 | Length: 969 | CRC: 1407863054

                !!NA_SEQUENCE 1.0
ID   AY597390   standard; genomic RNA; VRL; 969 BP.
XX
AC   AY597390;
XX
SV   AY597390.1
XX
DT   10-MAY-2004 (Rel. 79, Created)
DT   10-MAY-2004 (Rel. 79, Last updated, Version 1)
XX
DE   Rice stripe virus isolate YN-CX-03-M5 coat protein (CP) gene, complete cds.
XX
KW   .
XX
OS   Rice stripe virus
OC   Viruses; ssRNA negative-strand viruses; Tenuivirus.
XX
RN   [1]
RP   1-969
RA   Liao F.R., Wei T.Y., Wu Z.J., Lin Q.Y., Xie L.H.;
RT   "Genetic diversity of the coat protein gene of Rice stripe virus";
RL   Unpublished.
XX
RN   [2]
RP   1-969
RA   Liao F.R., Wei T.Y., Wu Z.J., Lin Q.Y., Xie L.H.;
RT   ;
RL   Submitted (12-APR-2004) to the EMBL/GenBank/DDBJ databases.
RL   Fujian Agriculture and Forestry University, Institution of Plant Viology,
RL   Kinshan, Fuzhou, Fujian 350002, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .969
FT                   /db_xref="taxon:12331"
FT                   /mol_type="genomic RNA"
FT                   /organism="Rice stripe virus"
FT                   /isolate="YN-CX-03-M5"
FT   gene            complement(1. .969)
FT                   /gene="CP"
FT   CDS             complement(1. .969)
FT                   /codon_start=1
FT                   /gene="CP"
FT                   /product="coat protein"
FT                   /protein_id="AAT06545.1"
FT                   /translation="MGTNKPATLADLQKAINDISKDALNYLTAHKADVVTFAGQIEYAG
FT                   YDAATLIGILKDKGGDTLAKDMTMCITMRYVRGTGFVRDVTKKVKVAAGSTEASTLVSR
FT                   YGIVSSVGSNANAITLGRLAQLFPNVSHEVVRLISGVKMAVDSSDLGLTGCDNLLWDYV
FT                   PQYIKLESETAPYCTTHSLSHILFVVHIIHSFQITKKTMPEGKKKERGLTKDIDMMKYT
FT                   TGLLVITCKSKNLIDKKKEDGRKKVLDEFITNGKVKTTIFDALAGMSVNTISTYGNQTK
FT                   LYLAQQSKLMKILAENTSKTATEVSGLVKDFFEDEAEGADD"
XX
SQ   Sequence 969 BP; 235 A; 252 C; 192 G; 290 T; 0 other;

  AY597390  Length: 969  May 18, 2004 09:08  Type: N  Check: 7214  ..

       1  ctagtcatct gcaccttctg cctcatcctc gaagaaatcc ttcaccaacc
      51  cgctgacttc tgttgctgtc tttgaagtgt tctcagcaag gatcttcatc
     101  agcttgctct gttgggccaa gtacagcttg gtctggttcc catatgtact
     151  gatcgtgttg acagacatac cagccagtgc atcgaagatt gtggtcttca
     201  ccttcccatt ggtgatgaat tcatctaaga ccttctttct accatcctcc
     251  ttcttcttgt caatcaagtt ctttgacttg catgtgatga ccaggagacc
     301  agttgtgtac ttcatcatgt ctatgtcctt tgtcagacca cgctccttct
     351  tcttaccctc tggcatggtc tttttagtta tttggaagga gtgaatgatg
     401  tgcacaacaa acaagatgtg actaagggag tgagttgtgc agtaaggagc
     451  tgtttcactc tccagtttga tatattgtgg aacatagtcc cacagtaagt
     501  tgtcacatcc tgtcagcccc agatcagaag agtccacagc catcttaaca
     551  ccagaaatta gtcgcacaac ttcatgtgag acatttggga atagctgagc
     601  caacctccca agtgtgatgg cattggcatt tgatcccaca gaggacacta
     651  tcccatacct tgacaccaag gttgaagcct cagtgcttcc agccgccact
     701  ttcactttct tggtgacatc tctcacaaag ccagtgcctc tcacatacct
     751  catggtgatg cacatagtca tatccttggc caatgtgtcg ccacctttgt
     801  ccttcaatat gccaatcaga gttgcagcat catagcctgc atactctatc
     851  tgaccagcaa aagtcacaac atcagcttta tgagcagtca ggtaattcaa
     901  cgcatctttt gagatgtcat taattgcctt ctgcaaatca gctagagtgg
     951  ctggcttgtt ggtacccat