Sequence of DPV Tomato leaf curl Bangalore virus
Tomato leaf curl Bangalore virus from India coat protein (AV1) gene, partial cds; replication associated protein (AC3) and transactivator protein (AC2) genes, complete cds; and replicase (AC1) gene, partial cds.
ACC No: AY738102
Dated: 2005-04-22 | Length: 1288 | CRC: 1005583094
!!NA_SEQUENCE 1.0
ID AY738102 standard; genomic DNA; VRL; 1288 BP.
XX
AC AY738102;
XX
SV AY738102.1
XX
DT 22-APR-2005 (Rel. 83, Created)
DT 22-APR-2005 (Rel. 83, Last updated, Version 1)
XX
DE Tomato leaf curl Bangalore virus from India coat protein (AV1) gene,
DE partial cds; replication associated protein (AC3) and transactivator
DE protein (AC2) genes, complete cds; and replicase (AC1) gene, partial cds.
XX
KW .
XX
OS Tomato leaf curl Bangalore virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-1288
RA Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT "Molecular characterization of tomato leaf curl Bangalore virus (Ban-1) in
RT tomato at Mallenahalli, India";
RL Unpublished.
XX
RN [2]
RP 1-1288
RA Chowda Reddy R.V., Colvin J., Muniyappa V., Seal S.;
RT ;
RL Submitted (31-AUG-2004) to the EMBL/GenBank/DDBJ databases.
RL Plant Animal and Human Health Group, Natural Resources Institute,
RL University of Greenwich, Central Avenue, Chatham Maritime, Kent ME4 4TB,
RL United Kingdom
XX
FH Key Location/Qualifiers
FH
FT source 1. .1288
FT /country="India:Mallenahalli"
FT /db_xref="taxon:220608"
FT /mol_type="genomic DNA"
FT /note="begomovirus acronym: ToLCBV-Ban1"
FT /virion
FT /organism="Tomato leaf curl Bangalore virus"
FT gene <1. .420
FT /gene="AV1"
FT CDS <1. .420
FT /codon_start=1
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="AAW50905.1"
FT /translation="GKIWMDENIKTKNHTNSVMFFLVRDRRPIDKPQDFGDVFNMFDNE
FT PSTATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVKVNNYVVYNQQEAGKYEN
FT HSENALMLYMACTHASNPVYATLKIRIYFYDSVTN"
FT gene complement(423. .827)
FT /gene="AC3"
FT CDS complement(423. .827)
FT /codon_start=1
FT /gene="AC3"
FT /product="replication associated protein"
FT /protein_id="AAW50906.1"
FT /translation="MDSRTGEPITAAQTENGVFIWEIQNPLYFKITEHYNRPFLSERDI
FT ITVQIQFNHNLRKALGIHKCFLAYRIWTTSQHLTGHFLRVFKTQVHRFLNNLGVISINN
FT VNRAVDHVLWNVLHHVVYVEQSYLIKFNIY"
FT gene complement(568. .972)
FT /gene="AC2"
FT CDS complement(568. .972)
FT /codon_start=1
FT /gene="AC2"
FT /product="transactivator protein"
FT /protein_id="AAW50907.1"
FT /translation="MQPSSPSKGHSTQVPIKVQHSLAKKGTRRRRVDLPCGCSYFIALA
FT CNDHGFTHRGTHHCSSNREWRVYLGNSKSPLFQDNRALQPAIPVGERHHHRPNTIQSQL
FT EESVGDTQMLSSLPNLDDLTASDWSFLKGL"
FT gene complement(875. .>1288)
FT /gene="AC1"
FT CDS complement(875. .>1288)
FT /codon_start=1
FT /gene="AC1"
FT /product="replicase"
FT /protein_id="AAW50908.1"
FT /translation="YGKTMWARSLGPHNYLCGHLDLSPRVYSNDAWYNVIDDVDPHYLK
FT HFKEFMGAQREWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEDKNNALKQWAL
FT KNATFITLEGPLYSGSNQSATQPSQEGDQASTS"
XX
SQ Sequence 1288 BP; 345 A; 244 C; 288 G; 411 T; 0 other;
AY738102 Length: 1288 April 26, 2005 08:40 Type: N Check: 9387 ..
1 gggaagatct ggatggatga gaatatcaag actaaaaatc acacgaatag
51 tgttatgttt tttcttgttc gtgatcgtcg ccctattgat aagccacagg
101 actttggaga tgtgttcaat atgtttgaca acgagcctag cactgcaact
151 gtgaagaata tgcacagaga tcgttatcag gtgttgagga aatggcatgc
201 aactgttact ggtggtcaat acgcttcaaa ggaacaggca ttagtgaaga
251 agtttgttaa ggttaataat tatgttgttt ataaccagca agaggctggg
301 aaatatgaaa atcattctga gaatgcgttg atgttgtata tggcatgtac
351 tcatgcctct aatcctgtgt atgctacgct taagattcgt atttacttct
401 acgattctgt aaccaactga tattaataaa tattaaattt tattaaatat
451 gattgttcta catatacaac atgatgtaat acattccata atacatgatc
501 aactgctcga tttacattat taatactgat aactcctaga ttatttaaaa
551 atctatgtac ttgggtctta aagaccctta agaaatgacc agtcagatgc
601 tgtgaggtcg tccagattcg gtaggctaga aagcatttgt gtatccccaa
651 cgctttcctc aagttgtgat tgaattgtat ttggacggtg atgatgtctc
701 tctccgacag gaatggccgg ttgtagtgct ctgttatctt gaaatagagg
751 ggattttgaa tttcccagat aaacacgcca ttctctgttt gagctgcagt
801 gatgggttcc cctgtgcgtg aatccatggt cgttgcaggc taacgctatg
851 aagtatgaac agccgcacgg cagatcaact cgtcgacgcc tggtcccctt
901 cttggctagg ctgtgttgca ctttgattgg aacctgagta gagtggccct
951 tcgagggtga tgaaggttgc attttttaga gcccactgct ttagtgcgtt
1001 attcttgtct tcgtccagaa attctttata actgctgtta ggtcctggat
1051 tgcagagaaa gatagtggga attcctcctt taatttgaac tggctttccg
1101 tattttgtgt tggactgcca ttccctttgg gcccccatga actctttaaa
1151 gtgtttcaga taatgcggat cgacgtcatc tatgacgttg taccacgcat
1201 cattggaata cactcgtggg cttaagtcca aatgtccgca tagataatta
1251 tgcgggccta aagacctagc ccacatagtc ttcccgta