Sequence of DPV Banana streak VN virus
Banana streak virus strain Acuminata Vietnam, complete genome.
ACC No: AY750155
Dated: 2007-06-29 | Length: 7801 | CRC: 1211652942
ID AY750155; SV 1; circular; genomic DNA; STD; VRL; 7801 BP.
XX
AC AY750155;
XX
DT 11-OCT-2004 (Rel. 81, Created)
DT 29-JUN-2007 (Rel. 92, Last updated, Version 3)
XX
DE Banana streak virus strain Acuminata Vietnam, complete genome.
XX
KW .
XX
OS Banana streak virus strain Acuminata Vietnam
OC Viruses; Retro-transcribing viruses; Caulimoviridae; Badnavirus.
XX
RN [1]
RP 1-7801
RA Lheureux F., Laboureau N., Muller E., Lockhart B.E.L., Iskra-Caruana M.-L.;
RT "Molecular characterization of banana streak acuminata Vietnam virus
RT isolated from Musa acuminata siamea (banana cultivar)";
RL Arch. Virol. 152(7):1409-1416(2007).
XX
RN [2]
RP 1-7801
RA Lheureux F., Laboureau N., Lockhart B.E.L., Iskra-Caruana M.-L.;
RT ;
RL Submitted (13-SEP-2004) to the EMBL/GenBank/DDBJ databases.
RL AMIS-UMR BGPI, CIRAD, TA 41/K Campus International de Baillarguet,
RL Montpellier 34398, France
XX
FH Key Location/Qualifiers
FH
FT source 1. .7801
FT /organism="Banana streak virus strain Acuminata Vietnam"
FT /specific_host="plantain"
FT /strain="Acuminata Vietnam"
FT /mol_type="genomic DNA"
FT /note="BSV-AcVnm"
FT /db_xref="taxon:328806"
FT CDS 754. .1191
FT /codon_start=1
FT /product="unknown"
FT /note="ORFI"
FT /db_xref="InterPro:IPR010746"
FT /db_xref="UniProtKB/TrEMBL:Q5XM29"
FT /protein_id="AAU95073.1"
FT /translation="MDSYWDLEFEKYKNSHSKSVSDLSYLDLASADKVSNKDLAFNLHI
FT NTYRSDLGFKVAIHSLSKNRELLIQNRKLLEEQKQQLSEINNLSKVVRLQRADLKETLR
FT RQDVLAKELQALRKDYLERRPLSKEDVEELVVRISEQPKIY"
FT CDS 1283. .1681
FT /codon_start=1
FT /product="unknown"
FT /note="ORFII"
FT /db_xref="UniProtKB/TrEMBL:Q5XM28"
FT /protein_id="AAU95074.1"
FT /translation="MSLAGSKATAIYQEALQSTAAGWEDTGIGFTDKGVISTTTLSRQL
FT NSLLFLVIKQNQQITTISEELTQLHNRVKNLEGRTGVSASPLYKSEIESINAKLKSIQD
FT IQGSHPPKETPSGVIKVFEDPYSILRRL"
FT CDS 1682. .7378
FT /codon_start=1
FT /product="putative polyprotein"
FT /note="ORFIII; cleavage products predicted to include viral
FT movement protein, coat protein, aspartic protease, reverse
FT transcriptase and RNAse"
FT /db_xref="GOA:Q5XM27"
FT /db_xref="HSSP:O88513"
FT /db_xref="InterPro:IPR000477"
FT /db_xref="InterPro:IPR001878"
FT /db_xref="InterPro:IPR002156"
FT /db_xref="InterPro:IPR009007"
FT /db_xref="UniProtKB/TrEMBL:Q5XM27"
FT /protein_id="AAU95075.1"
FT /translation="MASRPRVSGSTTRTMIAEPGVPLVDDQIREYRSAARVAYEAQRIA
FT RRTGNILGRIVGRQPREHTLAMVVDPNSELERSLAHRARTIPAEVLYMTQRGEPTNRVY
FT RNRTEERMLVTHGQQDRTFILPESYEELREAGFEYIHLGVLQVRIQIMHRTYDGTMALV
FT VFRDTRWTQENHQDRSIIATMEADLSQGHQLIYVIPDIMMTIRDFYQHIQISILTKGYE
FT GFQGEANLLITRSCRCRLSNVPNVGFQYNIQNVVEFLKSRGVKALNATKLSTRRFQGGE
FT WNIRPSEVVVPMQPTTMIVRVNYDSSRSIRFGDYEASTSSSAPRYEQDGDEDEALGDIH
FT QVNMITIIEDDAEDDYPRLSALERIIAPESMVGEEDTIAEFLSNLSLDSSTDEEFYDAD
FT NSLFEEEEYDGDSEVSTPRSKYNIFALEDEYPKLQQLESLVLSTTESAISRFRPADTDM
FT TGVGPGYAPATGTAGYTGASSSDFPYPRRPRKWDNNSEWFNLPTANARQASIFVMPQDF
FT DTKVFERWESSVLLHMSDKVFDDPQDKLTYVENLLGESEKKMFITWRMMFTAEYEEMKN
FT NALGSNGTQNILNQIRMIFFLENPQVGTTNTQDAAYKTLKQLVCTEMSGPAIYRYLNDY
FT FHLAAKSGRAWASDELSKEFFTKLPRGLGDRVEKKFKEKYPNNTIGVAPRITFTRNYIK
FT EICQEAVFQSQLKRLDFCKGTPVHGLYGKEKAYGRKYGVRKSTSYKGKPHKSHVRIDKK
FT KHLLMKRKDCKCFACGDIGHFASECPNPKKLMHRVQILQSLELDDGIDVISVGFDESDV
FT SDIYSVSEGEDSYQFNNEDFDVIGHDVFMFTIEEQRNCLVETTSAWRSAMKVTPEEKNC
FT LHTWSFEEKTTDHCRACKNLALRGSRADCTQCKIIICSLCKPYYFQDGSPIPAQSSTPS
FT GYSYDDWMGSANRWKAHYEFSQARRKSLKADLERAEEELKFYKQKEKEKAKLKDQIPEA
FT VQAKLDDLEKEKELNNILRIEAETELKALKESFKEKEEALKEEITALEEEVRIHKEEAE
FT ELQEENQKLKEKIIAFEKDVTQGPEEVIELVNNVEEHLVLTGQQKNNLLNIKITLEVKE
FT KRITMNAILDTGAAICVCDGQMVNEYFRRPSMMNAFIKGVNGITNVKEILEEGKIWIGN
FT QWFRIPRTYIMPQLSEGLHFIIGMNFIRAMEGGIRIEQGTVTFYKMVTQAQAPPMVHDI
FT SYLEELELELPIYYDICATNPSGGEINSDLISPSEIRKLKDLGYIGEEPLKHWAKNQVK
FT CRIEIKNPDLIIEDRPLKHVTPAMKESMKKHVDKLLELKVIRPSTSKHRTTAIIVQSGT
FT EIDPLTGKEKRGKERLVFNYKRLNDNTEKDQYSLPGINTIISRIGKSKIYSKFDLKSGF
FT HQVAMDPESIPWTAFWAIDGLYEWLVMPFGLKNAPAIFQRKMDNCFRGTEEFIAVYIDD
FT ILIFSDNISDHRKHLSKFLEICKANGLVLSPTKMKIGAKEIDFLGATIGNSKIKLQPHI
FT IKKIIETKDEELKETKGLRKWLGVLNYARAYIPNLGKTLGPLYSKTSINGEKKMNSQDW
FT KVVQLIKNQVQNLPDLDIPPAEATMVLETDGCMEGWGGVCKWKLHPSDTRLAEKVCAYA
FT SGRYHPIKSTIDAEVHAVINSLEKFKIYYLDKKELIIRTDSQAIVAFYKKQADHKPSRT
FT RWLMLIDYITGLGINVKFEHIDGKENVLADTLSRLVQVLITKVHHPAETQLVEAVMEVI
FT SNPKKEALDKVNHFIFLTQQWIAERKEEHTVNTLLQLEEPQLHCGCRNYETGERRNAIL
FT LQSHTSANPNRWFYKCAENKCHIWIWKDILDQYAEDYATYTRIGLEALNLEDWFEEPEP
FT DPPNPVDRQRIEDILDLLNVSNDD"
XX
SQ Sequence 7801 BP; 2630 A; 1630 C; 1771 G; 1770 T; 0 other;
ay750155 Length: 7801 29-JUN-2007 Type: N Check: 1176 ..
1 tggtatcaga gcaaggtttt ctgtaagtaa tttatggctt tcatggggta
51 aaacccttag ataggagcct gagggctctg ctatgttcta ttttgagaaa
101 ataactgtgt aagtagtaat gcatgataaa tcgaataagt tctttacgga
151 tggtcctaaa tttatgaaat cattctttta ctatctgagt gagacccttg
201 tgtttccaag ttctactgag aaatcatgag taaatggacg ttgacacact
251 gacttaagga aaagaaagat gtgcctagga tgaagtcgag cactgttcta
301 ggctgaaggg tgaaaagaaa aatgagttga gttgggagta agactctgag
351 aggcttgagg caaaagaacc ggaaccttac ctagcaaagt aagacccaag
401 ggagggcagt agctggagaa ccccggtgtg agtttcttta cctagcagaa
451 gatatactct agtatcctca aaacaccgtg aagtatttac aaccctttat
501 gaacaagtat tttctggagt tagatgtcag ccaccaaaga tcatgatcta
551 tcacaaacaa acttgagtca tacagagaag aactcagatg taactgaatg
601 actaatgatc agggacctct attaaagagc ttagtaagaa gtaagtgcat
651 aaactacctc tggaactggt tataatcttg aaatgagcat atgtatccca
701 aaggttactc ctatctgtcc gtgaccataa gaaaccttct ttaaagaaaa
751 actctggatt cctactggga tcttgaattt gaaaagtaca aaaactctca
801 ttccaaatct gtttcagatc tttcttattt agacttagca tctgctgata
851 aggtctctaa taaagacctt gcatttaatt tacatataaa cacttatcgt
901 agtgatcttg gttttaaagt cgcaattcac tctttatcaa aaaatcgtga
951 gctgctaata cagaacagga agcttttgga agaacaaaag cagcagctgt
1001 ctgaaattaa caacctatct aaggttgtgc gtctccaacg agctgattta
1051 aaggagacct tgagaagaca ggacgtcctt gcgaaggagc ttcaggctct
1101 tcgtaaagac tatctggaaa ggcgccctct tagcaaggag gacgtggaag
1151 aattggttgt ccgcatctct gaacaaccaa aaatttattg aaaaaacaga
1201 cggaagctct tactgaggag cttacaaagg aggttcaggc actgaagcta
1251 atcatccata acttcgaaca gaagttactg ggatgagcct ggccggaagc
1301 aaggccacag caatctatca agaagccttg caatctactg ctgctggttg
1351 ggaagacacc ggcatcggat ttactgataa aggagttatc agtaccacta
1401 ccctatcaag gcagctaaat tcgctgttat ttctggtgat caaacaaaat
1451 cagcagatca ccaccatctc ggaagaacta acccaacttc acaaccgggt
1501 taaaaacctt gaaggaagga caggggtatc tgcaagcccc ctgtataaat
1551 cggagattga atccatcaac gccaagctca aaagtattca agatatacaa
1601 gggagtcacc ctccaaaaga gaccccctcc ggagttatca aagtttttga
1651 ggatccctac agcatcctcc gcagactata aatggcgtca agacctagag
1701 tttctgggag cactaccaga accatgatag cagaaccagg ggttcccctg
1751 gtggatgatc agatccggga ataccggagt gcggcccgag tcgcatacga
1801 agcacaaagg attgccagac gcactggcaa tattcttgga agaattgttg
1851 gacgacaacc aagggagcat acccttgcga tggtcgtgga ccccaacagt
1901 gagctggaac gctcactggc tcaccgggca cgaacaatac ctgctgaagt
1951 cctttacatg acccagcgcg gtgagcctac aaatcgggtc tatcggaaca
2001 gaactgaaga aaggatgcta gtgactcatg gtcagcaaga taggactttc
2051 atcttgccag agtcatatga agagctcagg gaggctggat ttgagtacat
2101 ccatctaggg gtactccagg tgcgcatcca aattatgcac cgaacatatg
2151 atggtacaat ggcattagtg gtcttccgtg acaccagatg gacacaggag
2201 aaccaccaag acagatccat tatagcaacc atggaggctg atctctccca
2251 agggcatcag ctaatttacg tcatcccaga tataatgatg actattcggg
2301 atttctacca gcacattcag ataagcatcc ttaccaaagg atatgaaggc
2351 tttcaaggag aagcaaatct ccttattaca agaagctgcc ggtgcagatt
2401 aagcaacgtt cctaacgttg gcttccaata caacatccag aacgtcgtgg
2451 aattcttaaa atctagggga gtaaaagccc taaatgcgac gaaattaagc
2501 accaggaggt tccaaggagg agaatggaac atccgaccat cagaagtggt
2551 ggtccctatg cagccaacaa ctatgatagt acgagttaat tatgactcgt
2601 cacgaagcat cagattcggg gattatgaag ctagcacatc atcatcagcc
2651 ccgagatatg agcaagacgg tgatgaagat gaagcacttg gtgatatcca
2701 tcaagtaaat atgatcacca tcatagaaga tgatgcagaa gatgactacc
2751 cacggttatc agctttagag cgaataatcg ctccagaaag catggtggga
2801 gaggaggaca caattgctga atttttaagc aatctgtcct tagattcctc
2851 cactgatgag gaattctacg acgccgacaa ctcattattc gaagaagaag
2901 aatatgatgg ggattccgaa gttagcaccc caaggagcaa atacaatata
2951 tttgcgctag aagatgagta cccaaaactt caacagctgg aaagcctggt
3001 actctccaca acagagtctg ctatcagtcg ctttagacca gcagacacag
3051 atatgactgg cgtaggccct ggctacgcac cagcaactgg aacagctggc
3101 tatactggag ccagttcatc tgatttccct taccctagaa gaccaagaaa
3151 gtgggacaac aactcggagt ggttcaacct acccaccgct aacgcgaggc
3201 aagcatcaat attcgttatg cctcaggatt ttgacacaaa ggtctttgaa
3251 agatgggaaa gttctgttct ccttcacatg tctgacaagg tttttgatga
3301 tccacaagac aagttaactt atgtggaaaa cctactagga gaatcagaaa
3351 agaagatgtt tatcacttgg aggatgatgt tcacagctga gtacgaagaa
3401 atgaagaaca acgctctcgg ctcaaatgga actcaaaata tcctgaacca
3451 gatcaggatg atattctttc tggaaaatcc ccaagttgga accaccaaca
3501 ctcaagacgc agcatacaag acactcaaac aactagtctg cacagagatg
3551 tctggacctg cgatctacag gtacctaaat gattacttcc atttagcggc
3601 aaaatctgga agagcgtggg catctgatga gctgtccaag gaattcttta
3651 caaaactgcc aaggggatta ggggacagag ttgaaaagaa attcaaagaa
3701 aagtacccca acaacactat tggagtagcc cccagaatca ccttcacaag
3751 aaattatata aaggaaatat gccaagaggc tgtattccaa agccaactga
3801 aaaggctaga tttttgcaaa gggacacccg tccacggctt atatggtaaa
3851 gagaaggcat atgggaggaa atacggagtc aggaaaagca cttcgtacaa
3901 aggaaagcct cacaagtcac atgtgaggat agataaaaag aagcacctcc
3951 tgatgaaacg aaaagactgc aagtgttttg cttgcggaga tatcggtcac
4001 ttcgcatcag agtgtccgaa tcccaagaag ctgatgcacc gagttcaaat
4051 tctacaatcc ttagagcttg atgacggaat cgacgtaatc tccgtaggat
4101 ttgatgagtc agatgtctca gacatctatt cggtatctga aggcgaggac
4151 agctaccagt tcaataatga ggattttgac gttataggac atgacgtgtt
4201 catgttcacc attgaagaac aaagaaactg cctggtagaa accacgtcag
4251 cctggagaag tgcaatgaaa gttactccag aagaaaagaa ttgcttacac
4301 acatggagct ttgaggaaaa gacaacagac cactgcagag cctgcaaaaa
4351 tctggcccta cgagggagca gagctgactg cactcagtgt aagataatca
4401 tttgctcttt atgcaaacca tactatttcc aggatggttc acctatccca
4451 gcacaaagtt caaccccatc aggatactcc tacgatgatt ggatgggatc
4501 agcaaatagg tggaaggcac actatgagtt ctctcaggca agaaggaaga
4551 gcctgaaggc agaccttgaa agagcggaag aagaactaaa attttataag
4601 caaaaggaaa aggaaaaggc caaattaaag gatcaaattc cagaagcagt
4651 acaagcaaaa ctggatgatc tggaaaaaga aaaagagctc aataacatcc
4701 taagaataga ggctgagaca gagctaaaag cattaaagga aagcttcaaa
4751 gaaaaggaag aagccctgaa ggaagaaatc acagctctag aagaagaagt
4801 gaggatacac aaagaggagg ctgaagaact tcaggaagaa aatcaaaaac
4851 tcaaagagaa gatcatagcc ttcgaaaaag acgtaacaca aggaccagaa
4901 gaagtgatcg aattggtcaa taacgtggag gagcacctgg tactaacagg
4951 acaacagaag aacaatctcc tcaacatcaa gataactctg gaagttaagg
5001 aaaaaaggat taccatgaac gcgatactag acactggagc cgcaatctgt
5051 gtctgtgatg ggcaaatggt aaacgaatat ttcaggagac catcaatgat
5101 gaatgcgttc ataaagggag ttaatgggat taccaatgtc aaagaaatct
5151 tagaggaagg aaaaatctgg attggtaatc aatggttcag aatcccaagg
5201 acatacatca tgccccagct atcagaaggc cttcatttca tcatcggaat
5251 gaactttatc agggcaatgg aaggagggat tcgaattgag caaggaacgg
5301 taaccttcta caaaatggtt acacaagcac aggcaccccc tatggtacac
5351 gatatttctt accttgaaga attagaatta gaactgccga tttactatga
5401 tatctgtgca actaacccct caggaggaga aatcaatagt gacctaatat
5451 ccccctcgga gatccggaaa ctaaaggact taggctacat tggggaagag
5501 cccttgaaac attgggctaa gaatcaagtc aagtgccgaa ttgaaatcaa
5551 gaaccctgac ttaatcattg aagataggcc cttgaagcac gtcaccccag
5601 caatgaaaga atccatgaag aaacatgtgg acaagctgct ggaacttaag
5651 gtaatcaggc catccacaag caaacaccgg acgactgcga taattgttca
5701 atccggtaca gaaattgacc ccctcactgg aaaagagaaa agagggaaag
5751 agaggcttgt attcaactac aaacgcctca acgacaatac cgaaaaagac
5801 cagtattcac tacctggcat caatacaatt atcagcagga tcggcaagtc
5851 aaaaatttac agcaaatttg acttaaaatc cggattccac caggtagcca
5901 tggatccaga aagcatccca tggacggcct tttgggccat agatggactt
5951 tatgaatggc tagttatgcc atttggtctg aagaatgcgc ccgctatatt
6001 tcagagaaag atggacaact gcttccgagg aacggaggaa ttcatagcgg
6051 tatatattga tgatatttta atattctctg acaatatctc tgatcacagg
6101 aaacatctgt caaaattcct ggagatctgc aaggcgaatg ggctggtatt
6151 aagcccaaca aaaatgaaga taggcgcaaa ggaaattgat ttcctaggag
6201 caactattgg aaactccaag atcaagcttc aacctcatat aatcaagaag
6251 atcatcgaga caaaggacga ggagctaaag gaaacaaagg ggctcagaaa
6301 atggttggga gtccttaact atgcacgggc atacattcca aatttaggaa
6351 aaacattagg cccgctctac tccaagacgt caattaatgg agagaagaag
6401 atgaacagcc aagattggaa ggttgttcaa ctgatcaaaa atcaggtaca
6451 aaatttacct gaccttgaca taccccctgc agaggcaact atggtcttag
6501 agactgacgg gtgtatggaa ggatggggag gagtatgcaa atggaagctc
6551 catccctctg acacaagact ggcagaaaag gtctgtgcgt acgcaagtgg
6601 aaggtatcac cccatcaaga gcacaattga tgcagaggta cacgcagtga
6651 tcaacagctt agaaaaattc aaaatttatt atctggataa aaaggagttg
6701 atcataagaa cagacagcca ggctattgtg gctttttata agaagcaagc
6751 tgatcataag ccctcaagaa caaggtggct tatgctaatt gactacatta
6801 ctgggctcgg aatcaacgtc aaattcgagc atattgacgg gaaagaaaat
6851 gttctagctg atactctatc aaggctggtc caagtgctga tcaccaaggt
6901 tcatcatcca gcagaaaccc agctagtcga agccgtcatg gaagttataa
6951 gcaatccaaa gaaagaagcc ttggacaagg taaaccattt tatcttccta
7001 acccaacagt ggattgcaga acgcaaggag gagcacacgg tgaacacgct
7051 actccagttg gaagaaccac agctgcattg tggttgtaga aactatgaaa
7101 caggggaaag aaggaacgcg attctcctac aaagtcacac ttcagccaac
7151 ccgaacagat ggttctataa gtgtgcagaa aacaagtgcc acatttggat
7201 ctggaaagac atcctggacc aatatgctga agattatgct acctacacca
7251 ggataggact tgaagcactt aaccttgaag attggttcga agaaccagaa
7301 cccgatccac ctaaccctgt ggaccgccag aggatagagg acatcctgga
7351 cctactgaac gtcagcaatg acgactgaaa gattcccagg acaccggcgg
7401 aagtggtgga cccagtctag gtgcgatgct tagtcgcgca cgatgactat
7451 gtcggaaggc atctttgctt tcggcaaact ttagtaatac tttaaggaaa
7501 gtattgtaca agttaggtgc agagacaata atgcacccag ctttagcttt
7551 gtttatggaa ttattgtgtc ggttgcatta ttggatgcct gcgtgcaccc
7601 taagcaatcc ccggccctct tctctataag aggagccctt gcaatcagtt
7651 gcaagcatgc aagtttccca ctgcaagctt acttctgagt ttgagttcaa
7701 gttcaataaa attcaagctt tcctcttaca ttctgttctt gaaaggttcg
7751 atctaatcga gcgagtagag aacaagatct tttgggattt ccgccgttcc
7801 a