Sequence of DPV Tomato golden vein virus
Tomato golden vein virus replication-associated protein (AC1) gene, partial cds; coat protein (AV1) gene, complete cds; and transactivator protein (AC3) gene, partial cds.
ACC No: AY751742
Dated: 2004-10-12 | Length: 1934 | CRC: -1322600945
!!NA_SEQUENCE 1.0
ID AY751742 standard; genomic DNA; VRL; 1934 BP.
XX
AC AY751742;
XX
SV AY751742.1
XX
DT 12-OCT-2004 (Rel. 81, Created)
DT 12-OCT-2004 (Rel. 81, Last updated, Version 1)
XX
DE Tomato golden vein virus replication-associated protein (AC1) gene, partial
DE cds; coat protein (AV1) gene, complete cds; and transactivator protein
DE (AC3) gene, partial cds.
XX
KW .
XX
OS Tomato golden vein virus
OC Viruses; ssDNA viruses; Geminiviridae; Begomovirus.
XX
RN [1]
RP 1-1934
RA Inoue-Nagata A.K., Boiteux L.S., Giordano L.B., Bezerra I.C., Ribeiro S.G.,
RA de Avila A.C.;
RT "The tomato begomoviruses found in the Federal District, Brazil";
RL Virus Rev. Res. 8:186-186(2003).
XX
RN [2]
RP 1-1934
RA Albuquerque L.C., Fernandes-Carrijo F.R., Giordano L.B., Boiteux L.S.,
RA de Avila A.C., Fonseca M.E.N., Nagata T., Inoue-Nagata A.K.;
RT "A new begomovirus species in the tomato crop on Central Brazil";
RL Fitopatol. Bras. 29:218-219(2004).
XX
RN [3]
RP 1-1934
RA Inoue-Nagata A.K.;
RT ;
RL Submitted (15-SEP-2004) to the EMBL/GenBank/DDBJ databases.
RL Virology, Embrapa Vegetables, Km09, BR060, Brasilia, DF 70359-970, Brazil
XX
FH Key Location/Qualifiers
FH
FT source 1. .1934
FT /country="Brazil"
FT /db_xref="taxon:296190"
FT /mol_type="genomic DNA"
FT /organism="Tomato golden vein virus"
FT /isolate="PA-05"
FT /specific_host="Lycopersicon esculentum"
FT /segment="DNA-A"
FT gene complement(<1. .698)
FT /gene="AC1"
FT CDS complement(<1. .698)
FT /codon_start=1
FT /note="rep"
FT /gene="AC1"
FT /product="replication-associated protein"
FT /protein_id="AAU95486.1"
FT /translation="MPLPKRFTVNAKNFFLTYPHWSLSKEETLSQLQALKTRTNKKFIR
FT VTRGFHENGDPHLHVLIQFEGKFKCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKTYM
FT EKDGDFIDFGNFQIDGRSSRGGCQTANDTYAKVLNAENLSKALNILKEEQPRDYVLHLD
FT KIQSHVQKIFAKAPAPWVPIFELSSFTHVPDEMQQWADEYFGRGAAARPERPISIIVEG
FT DSRTGKTMWA"
FT rep_origin 699. .989
FT gene 990. .1739
FT /gene="AV1"
FT CDS 990. .1736
FT /codon_start=1
FT /note="CP"
FT /gene="AV1"
FT /product="coat protein"
FT /protein_id="AAU95487.1"
FT /translation="MPKRDAPMAYSGQGPRKVSRSSNYSPRGGIPKRDAWVNRPMYRKP
FT RIYRTLRGPDVPKGCEGPCKVQSYEQRHDISHLGKVMCISDVTRGNGITHRVGKRFCVK
FT SVYILGKIWMDENIKLKNHTTSVIFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKND
FT LRDRYQVIHRFNAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENALLLY
FT MACTHASNPVYATLKIRIYFYDSISN"
FT gene complement(1733. .>1934)
FT /gene="AC3"
FT CDS complement(1733. .>1934)
FT /codon_start=2
FT /note="trap"
FT /gene="AC3"
FT /product="transactivator protein"
FT /protein_id="AAU95488.1"
FT /translation="NFQVWTTSLRASGMTYLIRFKYFVLLYLNQLGIITINNVIRAVRF
FT ATDKSYVNYVLENHSIKFKLY"
XX
SQ Sequence 1934 BP; 536 A; 351 C; 437 G; 610 T; 0 other;
AY751742 Length: 1934 October 19, 2004 08:33 Type: N Check: 7294 ..
1 caggcccaca tcgtctttcc tgtcctggaa tcaccctcaa cgatgatact
51 aataggtctc tccggccgcg cagcggcacc ccttccgaaa tactcatcag
101 cccattgctg catctcatca ggaacgtgag taaaggaaga taattcaaat
151 atagggaccc atggggctgg agcctttgca aatatttttt ggacatgtga
201 ttgtatttta tccaaatgaa gaacataatc tctaggttgt tcttctttta
251 atatatttaa ggccttggat agattttctg cgtttagaac ctttgcataa
301 gtgtcattgg cagtttggca gcctcctctt gatgatcttc catcgatctg
351 gaaatttcca aaatcaatga agtctccgtc tttttccata taggtcttga
401 cgtcggacga gcttttagct ccctgaatgt ttggatggaa atgtgctgat
451 cttgttgggg ataccaagtc gaagaatcgt tgattctggc atttgaattt
501 gccttcgaat tgaataagca catggagatg agggtcccca ttttcgtgaa
551 atcctctggt tacacgaata aatttcttgt ttgttcgtgt tttaagtgcc
601 tgtaattggg aaagtgtttc ctctttgctt aatgaccaat gagggtatgt
651 aaggaagaaa ttttttgcat ttacagtgaa acgctttggc agtggcattg
701 tagtaaataa gaggatgaga cccgatagct ctccttcaaa cttggcgaaa
751 tgaattgggg aatgggtctc aatatatagt agagtccatt atagaatata
801 attgccacgt ggcgggcatc cgatataata ttaccggatg gccgcgcgat
851 ttttttatgt ggtcccactg tgagtgacca atcagattgt gtcctgggcg
901 gttatttatt tcgaaatact taggcgctaa gttgttaaag ttgtataaat
951 tagacaatcg taagatggtc cgacatactt taattcaaaa tgccaaagcg
1001 agatgccccc atggcgtata gtggccaggg accacgaaaa gtatcccgct
1051 cttctaatta ttcacctcgg ggaggtatac ccaagcggga tgcttgggta
1101 aacaggccca tgtacaggaa gcccaggata tatcgtacgt tgagagggcc
1151 tgatgttcct aaagggtgtg aaggcccatg taaagttcaa tcctatgagc
1201 aacgtcatga catttctcat cttggcaagg tgatgtgtat ctctgatgtg
1251 acacgtggta atggtattac acaccgtgtt ggtaagcgtt tttgtgttaa
1301 gtctgtgtac atattgggta agatatggat ggacgaaaat attaaactga
1351 agaaccatac caccagtgtt attttttggt tagtgaggga tcgtagaccc
1401 tatggtacac ctatggattt tggtcaggtg tttaacatgt ttgataatga
1451 gcctagtact gctacggtga agaacgatct tcgtgatcgt tatcaagtca
1501 ttcatcgatt caatgctaag gttacgggtg gacagtatgc tagcaacgag
1551 caagctcttg ttcggcgttt ttggaaggtc aataatcacg tggtttacaa
1601 tcatcaggaa gcagggaaat atgagaatca tacggagaat gctctgttat
1651 tgtatatggc atgtacacat gcctctaatc ccgtgtatgc tactttgaaa
1701 attcggatct atttttatga ttcgatttca aattaataaa gtttaaattt
1751 tattgaatga ttttcgagta cataatttac ataagatttg tctgttgcga
1801 aacgaacagc tcttattaca ttgttaatgg taataatgcc taattgattc
1851 agatacaata aaacgaaata tttaaatcta attaaatatg tcatcccaga
1901 agctctcagg gatgtcgtcc agacttggaa gttc