Sequence of DPV Mopeia virus
Mopeia virus AN20410 segment L, complete sequence.
ACC No: AY772169
Dated: 2004-11-15 | Length: 7271 | CRC: 2135657739
ID AY772169; SV 1; linear; genomic RNA; STD; VRL; 7271 BP.
XX
AC AY772169;
XX
DT 15-NOV-2004 (Rel. 81, Created)
DT 15-NOV-2004 (Rel. 81, Last updated, Version 1)
XX
DE Mopeia virus AN20410 segment L, complete sequence.
XX
KW .
XX
OS Mopeia virus AN20410
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC Old world arenaviruses.
XX
RN [1]
RP 1-7271
RA Lukashevich I.S., Carrion R., Moshkoff D.A., Ticer A., Brasky K.,
RA Hubbard G.B., Patterson J., Bryant J., Salvato M.S.;
RT "Protective Activity of MOP/LAS Reassortant in Lassa Virus Challenge
RT Experiments";
RL Unpublished.
XX
RN [2]
RP 1-7271
RA Moshkoff D.A., Sadzewicz L., Salvato M.S., Pauza D.C., Lukashevich I.S.;
RT "The Complete Nucleotide Sequence of Mopeia Virus";
RL Unpublished.
XX
RN [3]
RP 1-7271
RA Moshkoff D.A., Lukashevich I.S., Salvato M.S., Sadzewicz L.;
RT ;
RL Submitted (06-OCT-2004) to the EMBL/GenBank/DDBJ databases.
RL Basic Science, Institute of Human Virology, UMBI, UMD, Room S517, 725 West
RL Lombard Street, Baltimore, MD 21201, USA
XX
FH Key Location/Qualifiers
FH
FT source 1. .7271
FT /organism="Mopeia virus AN20410"
FT /segment="L"
FT /strain="AN20410"
FT /mol_type="genomic RNA"
FT /country="Mozambique"
FT /db_xref="taxon:300175"
FT gene 80. .391
FT /gene="Z"
FT CDS 80. .391
FT /codon_start=1
FT /gene="Z"
FT /product="Z protein"
FT /note="zinc finger protein"
FT /db_xref="GOA:Q5S584"
FT /db_xref="InterPro:IPR003224"
FT /db_xref="UniProtKB/TrEMBL:Q5S584"
FT /protein_id="AAV54106.1"
FT /translation="MGKTQSKGQPSTNLLKETEPRHPVIPDARGTGPEFCKSCWFERRG
FT LVRCNDHYLCLNCLTLLHTVSDRCPICKHKLPFRLELQTQPTAPPEIPPSQNPPPYSP"
FT gene complement(502. .7215)
FT /gene="L"
FT CDS complement(502. .7215)
FT /codon_start=1
FT /gene="L"
FT /product="polymerase RDRP"
FT /note="L protein"
FT /db_xref="GOA:Q5S583"
FT /db_xref="InterPro:IPR014386"
FT /db_xref="UniProtKB/TrEMBL:Q5S583"
FT /protein_id="AAV54107.1"
FT /translation="MEELLSESKDLVSRYLLEDERLSKQKLAFLVQTEPRMLLIEGLKL
FT LSLCIEIDSCKANGCEHNSEDLSVEILLQRQGVLCPGLPFVVPDGFKFSGNTLILLECF
FT VRTSPINFEQKYKEDTIKLESLKPDLSSVDIILLPLIDGRTNFYTDLFPEWANERFRHI
FT LFSLLEFSQQSSKMFEESEYSRLCESLTKAGVRTSGIESLNVLTDSRSDHYERVLELCH
FT RGINNKMSILDVKKEIVSEFHAFRNKLKEGEIERQFVRTDRRQLLRDFNNLYIDREGDT
FT PSEIDPLKERFVKSSPMVTALYGDYDRYRQEGVDRDSCLQNHFQSSVPGWKSLLNKIKS
FT LKLLNTRRKLMLTFDAIILLAHLKDLKCHGELLGSEWLGSSFLSVNDRLVSLQETQKDL
FT KKWIERRMVSAMKKKGGVGTLCQRSELIFFDIINKLLTKAKEALSSASLCFRDYVKEED
FT ILEEDSYERLMLMEKRGIQPTMSYEKEEGNQFPYPLIELEADSIEDLRRLSSISLALVN
FT SMKTSSVAKVRQNEYGAARYKRVRCKEAFNQSFIMGSGNFNLIYQKTGECSKCYAINNP
FT EKGEICSFYADPKRFFPAIFSHCVIYETINTMMSWLSECIELRDQQKTLKLLLKITMIL
FT ILVNPSKRAQKFLQGLRYFIMAFVSDFHHKQLMEKLREDLITEPEHLLYSVVRSILNII
FT LGEGVSTMLTNRFKFVLNLSYMCHFITKETPDRLTDQIKCFEKYLEPKLEFDSININPS
FT EEGDEDERMLLLESANKFLSKETSMSNNRISYKVPGVSRKFFSMMTSSFNNGSLFKKGD
FT DLSGFKDPLVTAGCATALDLASNKSVVVNKYTDGERILYYDHDKLVAASVCQLSEVFQR
FT KTKYLLSKEDYDYKVQKAISDLVVGKKSGSSNPNSQGAPDELDELFLDSCALDCLEDVK
FT KSVDVVLEKYRYDRKFPVGNGSEEKSLTDLRKVLGTEDVGCVYYRLIQAEIAHHMVEDF
FT DESLLPGDAYEMICKGFFKDLELRSKYFYLDSLDSCPITCITQAVSTRTFNDQQFFQCF
FT KSLLLQMNAGKLAGKYSHYKNKCLNFKIDRERLMNDVRISERESNSEALGKALSLTNCT
FT TAVLKNLCFYSQESPQSYTSLGPDTGRLKFSLSYKEQVGGNRELYIGDLRTKMFTRLIE
FT DYFEALTKQYRGSCLNNEKEFHNAILAMKLNVSLGQVSYSLDHSKWGPMMSPFLFLVFL
FT QNLRWETRDDIEDIKSKDYVSTLLSWHIHKLIEVPFNVVNAMMRSYLKSRLGLKKSLHQ
FT TSTEAFFFEYFKQNRIPSHLSSIIDMGQGILHNASDFYGLVSERFINYCIKCLFEDEVD
FT SYTSSDDQISLFGKDLSDLLSNEPEEFQAILEFHYFLSDQLNKFISPKSVIGSFVAEFK
FT SRFYVWGDEVPLLTKFVAAALHNVKCKEPHQLAETIDTIIDQSVANGVPVTLCNAIQER
FT TLNLLRYAQYPIDPFLLFLDSDVKDWVDGNRGYRIMRNIEAILPESTQKVRKVLRTVFN
FT KLKLGELHEEFTAIYLSGDPADSFKKLTSLVGDDTLSEEDLSVCWLNLTTHHPLKMVMR
FT QKVIYTGAVELGEEKLPTLVKTLQSKLSSNFTRGAQKLLCEAVNKSAFQSGIASGFIGL
FT CKTLGSKCVRFSDRSTAYIKSLVSRLSALDSVSSLKVKGVDLWILGKEHTKAAEEALGF
FT LRPVLWDYFCIALSTSLELGSWVLGEPKVKEKTSSIPFKPCDYFPMKPTTTKLLEDKVG
FT FNHIIHSFRRLYPSLFERHLLPFMSDLASTKMRWTPRIKFLDLCVVLDVNCEAMSLISH
FT VVKWKREEHYVVLSSDLAIAHERSHLPITDERVVTTYDVVQNFLRQIYFESFIRPFVAT
FT SRTLGSFTWFPHRSSIPESEGLDNLGPFSSFIEKVIYKGVERPMYRHDLYSGYAWLDFE
FT CAPAILNLGQLIASGLTEQHVFESVSELLEAFADLSVGSVQISVTVNFQVRSQGESLKE
FT KFSLHLLFKGVVLEGGLFKPHSLDVTYSGSVQRSAIKDCWRVAQTSTWFKRETTSIWLL
FT STENICDYLRDSSPIPDVIPLSVLLNEEILDLEEHDFTHIGPEHVEIPLVVDSGYLIEG
FT TRKLLPFNPNIHDQDLNVFIGELMEDHSEILERSLSKMLRSRMDQGLHWLQLDIIGVVG
FT RCMPEGYENFLTRVFSGIDFWADFKGYSLCYSRSQASLMIQSSEGKFRLRGRLCRPLFE
FT EVGPPLDIE"
XX
SQ Sequence 7271 BP; 2060 A; 1725 C; 1365 G; 2121 T; 0 other;
ay772169 Length: 7271 15-NOV-2004 Type: N Check: 9420 ..
1 cgcacagtgg atcctaggca attttgtgga tctttgctga tacttcattc
51 tgcactcaaa gccgcatccg gcaagagtca tggggaaaac gcagtccaag
101 ggacagccca gcacaaatct cctcaaggag acagaaccaa ggcatccagt
151 aataccagat gccaggggaa ctggccctga attctgcaag agctgctggt
201 tcgaaaggag ggggttagtc aggtgcaacg atcactacct atgtttgaac
251 tgtcttacac ttttacacac agtgtcagat aggtgcccca tctgcaaaca
301 caaactaccc ttcagactag agctccagac ccagccgaca gcaccaccag
351 aaatcccacc atcccaaaat cccccaccct acagcccctg aggcagaact
401 ccgccccgaa gcccctccca aacacccctc ccctcccccc cggggggacc
451 ccccgccggg gctccccccg gggggagatg cgcgagctgt tctcggagca
501 cctactcaat gtcgagggga ggccccacct cttcaaagag gggcctgcac
551 agcctccctc ttaatctaaa cttcccctct gaagactgga tcatcagtga
601 agcctgcgat ctactgtagc agagactata gcctttaaaa tctgcccaga
651 agtcaattcc ggagaacact ctagtaagga agttttcgta gccttcaggc
701 atgcatcgtc ccacaacccc tataatatca agttgtagcc agtgtagtcc
751 ttggtccatt ctggatctca gcatcttgct caaagatctc tccaagattt
801 cggaatgatc ctccattagc tcaccaataa aaacattaag atcctggtca
851 tggatgttgg ggttgaaggg caggagtttc ctggtccctt caataaggta
901 tcctgagtca acaactaagg ggatttcaac atgctcaggc cctatatgcg
951 tgaaatcatg ttcctccagg tccaggatct cctcattcaa taagacggac
1001 aagggtatca catcaggaat gggggaacta tccctcaagt agtcacaaat
1051 attttcagtg gacagcaacc aaattgatgt ggtttccctt ttaaaccatg
1101 tagatgtctg tgcaactctc cagcaatctt taattgcgga tctttgaaca
1151 ctaccactgt aagttacatc aagggaatga ggcttgaata atccaccttc
1201 caacaccacc cctttgaaaa ggaggtggag actaaatttc tctttcaatg
1251 attcaccctg acttctcacc tgaaaattta ctgtgacaga aatttgaacg
1301 ctcccaacac tgaggtcggc aaaagcttca agcagctcac ttaccgactc
1351 aaagacgtgc tgctcggtta atcctgatgc tatgagctgt cctaagttta
1401 gaattgctgg tgcacattca aagtccagcc aagcataacc tgagtaaaga
1451 tcatgcctgt acatgggtct ttcaacaccc ttataaataa ccttttctat
1501 aaaagaagaa aaggggccga ggttgtcaag cccttccgac tcaggaattg
1551 aagatctatg tggaaaccaa gtaaaagaac ctaaagtcct gcttgttgca
1601 acgaatggtc tgatgaagga ctcaaagtag atttgtctca ggaaattttg
1651 taccacatca taagtggtca ccaccctttc atccgtgatt gggagatgag
1701 acctctcatg tgctattgct aaatctgaag acagaaccac ataatgctct
1751 tctctcttcc acttgacaac atgagaaatt aatgacattg cctcacaatt
1801 cacatctaga accacacaaa gatcaagaaa cttaatcctt ggtgtccacc
1851 tcattttcgt tgatgctagg tcactcatga agggcaagag gtgtctctca
1901 aatagagatg ggtaaagtct tctgaatgag tgaataatat ggttaaaccc
1951 caccttgtct tccaagagtt ttgtggtagt gggcttcatt gggaaatagt
2001 cacatggctt gaagggaatt gaggatgttt tctccttcac tttgggttca
2051 cccaacaccc aggaacccag ctcaagtgat gtagataagg ctatgcagaa
2101 gtaatcccaa aggacaggtc tcaagaaacc taacgcttcc tcagctgcct
2151 ttgtgtgctc cttacccaag atccaaagat cgacgccctt aactttcaag
2201 ctggaaacag aatccaatgc tgacagtctt gaaactaatg attttatata
2251 ggcggtggac ctatctgaga atcgaacaca tttgctacct agtgtcttgc
2301 aaagacctat gaaacctgat gctatcccac tctgaaaggc acttttgttg
2351 acggcttcac agagcaactt ttgtgcccct cttgtgaaat tagaggataa
2401 cttgctttgc aatgttttca ccaaggtagg cagtttttct tccccgagtt
2451 caacagcacc tgtgtaaatg accttctgtc tcatgaccat ctttaaaggg
2501 tgatgagttg tcaaattaag ccaacacacc gataaatcct cttctgagag
2551 ggtgtcatca ccaacaaggc tggtaagttt cttgaaggaa tctgcggggt
2601 ctcctgacaa gtagatggct gtgaattctt catgaagctc tcctaatttc
2651 agcttattaa aaactgtcct taggaccttc ctaactttct gagtgctttc
2701 tggtaggatt gcctcaatgt tcctcataat cctatagccc ctattgccat
2751 caacccaatc tttaacatca gaatccaaaa acaacaagaa aggatcaatg
2801 ggatattgtg catatctaag tagattcagt gttctctcct gaatagcgtt
2851 acatagtgtg acaggcacac cattggccac tgactgatca atgatagtgt
2901 caatagtttc agctaattga tgtggctcct tacacttaac gttgtggagg
2951 gcggcagcca cgaatttcgt taacaatgga acttcatcac cccagacata
3001 aaaccttgat ttgaactcag caacaaatga accaataaca ctctttggac
3051 tgatgaattt attcaattga tcacttagga aatagtgaaa ttctagaatg
3101 gcttggaatt cctcaggctc atttgagagt aaatctgaaa gatccttgcc
3151 aaatagtgat atttgatcat cactagaggt atatgaatca acttcatctt
3201 caaatagaca cttaatgcaa taatttatga atctctcact cactagaccg
3251 tagaagtcag aagcattgtg caagatccct tgccccatgt caattattga
3301 gctgagatgt gatggtattc tgttttgttt aaagtattca aagaagaaag
3351 cttctgttga cgtttggtgg agtgattttt tcaaacctaa cctagactta
3401 agataagatc tcatcattgc attcacaaca ttgaaaggta cctcaattaa
3451 cttgtgaatg tgccacgaca gcaaagtgga cacgtaatcc ttacttttta
3501 tgtcctctat atcatctctt gtctcccatc gcaaattttg aagaaacacc
3551 aggaaaagaa aaggggacat cataggcccc cacttgctgt gatcgaggct
3601 ataagagacc tgacctagtg aaacattcaa tttcatggct agaatggcat
3651 tgtggaattc cttttcatta ttaagacagc tccctctata ttgcttagtt
3701 agtgcctcaa aataatcctc aattaggcgt gtgaacattt ttgtcctcag
3751 gtcacctata taaagttccc tgttccctcc aacttgttct ttgtaagata
3801 aggaaaactt gagccttcca gtatcaggac ccaaggatgt gtatgactgt
3851 ggggattctt gactgtaaaa acataggttc tttagaactg cagttgtaca
3901 atttgtcaat gacagtgctt tacctaatgc ctcagaattg ctctctcttt
3951 cactgatcct aacatcattc atcagccttt ctctatcaat cttgaagttt
4001 aggcatttgt ttttgtaatg gctgtatttt ccagccaatt tccctgcatt
4051 catctgaaga agtagtgact tgaagcactg aaaaaactgc tggtcattga
4101 atgttctggt ggagacagct tgggtgatgc atgttattgg gcaagagtcc
4151 aaggaatcca aatagaaata ctttgatctt aactccaaat ccttaaaaaa
4201 gcctttgcag atcatctcat aagcatctcc aggtagtagt gactcatcaa
4251 aatcttccac catgtggtgt gctatctctg cctggatcag tctgtagtaa
4301 acacagccca catcttcagt acctaaaacc ttcctcaagt ctgtcaagga
4351 cttctcctct gacccatttc ccacagggaa cttcctgtca tatctatact
4401 tctcaaggac gacatcaaca gatttcttca catcctctag acagtcaagt
4451 gcacaactat ccaagaataa ctcatctaat tcgtcaggag ccccttgtga
4501 attgggattt gaggaacctg acttcttccc cacaacaagg tcactaatgg
4551 ccttttgcac cttataatca taatcctcct tactcaagag gtatttagtt
4601 ttcctctgga atacctctga tagctggcaa acagaagcag ccactagttt
4651 atcatgatcg taataaagta tcctctctcc gtcagtatac ttattcacaa
4701 ccacactttt gttgcttgca aggtcaagag ctgttgcaca cccagcagta
4751 actaatggat ctttaaaccc acttaggtca tctcctttct tgaaaagaga
4801 gccattgtta aaagaagacg tcatcattga gaagaatttt cttgacacac
4851 caggaacttt ataagatatt ctgttgttac tcatactggt ttctttggat
4901 aaaaatttgt ttgctgattc aagcagcagc atcctttcat cttcatcccc
4951 ctcttcagat gggttgatgt taatactgtc aaactccaac ttgggctcca
5001 aatacttctc aaagcactta atctgatctg tcaacctatc tggagtttcc
5051 ttagttataa aatgacacat gtatgatagg tttaacacaa acttaaatct
5101 attagtcaac atagtgctca ccccttcacc caggatgatg ttgagaatgc
5151 tcctcaccac actatacaag aggtgctccg gctctgttat gagatcctcc
5201 ctcaactttt ccattaactg cttatggtgg aagtctgaaa caaaggccat
5251 tatgaagtat cgcagacctt gcaagaactt ctgtgctctt ttgctagggt
5301 tcacaagtat gaggatcatg gtgattttga gcaataattt taaagttttt
5351 tgttgatctc tgagttctat acattcagac aaccaactca tcatggtgtt
5401 gatagtctca tagataacac agtgtgagaa aattgcagga aaaaaccttt
5451 ttggatctgc atagaatgaa caaatctccc ccttctcagg attgttaatg
5501 gcataacatt ttgagcactc tcctgttttc tgataaatta agttgaaatt
5551 cccgcttccc atgataaagc tttgattaaa agcttcctta caacgtacac
5601 gtttgtacct tgcagcacca tactcatttt gcctcacttt ggctactgat
5651 gatgtcttca ttgaattcac caatgccaaa gagatgctag atagtcttct
5701 caggtcttct atggaatcag cttccaactc aataagaggg taggggaatt
5751 gattcccctc ttctttctca tagctcattg ttggctgaat ccctcttttc
5801 tccattaaca taagcctctc gtaactgtcc tcctccagta tatcttcctc
5851 tttaacataa tctctaaagc acaaactggc agaggataat gcctctttgg
5901 cctttgtgag gagtttgttt atgatgtcaa agaatataag ctcagatctc
5951 tgacacagag ttcctacacc tcccttcttc ttcattgcac tcaccattct
6001 cctttcaatc cactttttaa ggtccttttg tgtttcttgt agtgacacca
6051 atctgtcgtt cacacttaag aatgaggagc caagccattc tgatcctaac
6101 agctcgccgt gacatttaag atcctttaag tgggccaaaa ggatgattgc
6151 gtcaaaagtc agcattagtt ttcttctggt gttcaataac tttagtgatt
6201 ttattttatt caacagtgac ttccatccag gcacagagct ttggaagtga
6251 ttctgcaagc agctgtctcg atcaactccc tcttgcctat aacggtcgta
6301 gtcaccatag agcgctgtta ccataggcga ggattttaca aacctctctt
6351 ttagaggatc aatctctgag ggtgtgtccc cctctctgtc aatataaagg
6401 ttgttgaaat ctctcaagag ctgtcgccta tctgtcctga caaattgtct
6451 ttctatctca ccctctttaa gcttattcct aaaagcatga aattctgata
6501 caatctcttt tttcacatca agaatggaca ttttgttatt gatgcctctg
6551 tggcagagct ccaacaccct ctcataatga tcagatcgag aatctgtcaa
6601 aacattgagg ctctcaatgc ccgatgttct cactcctgct tttgttaaag
6651 attcacaaag ccttgagtac tcagattctt caaacatttt tgatgactgc
6701 tgcgagaatt caagtaagct aaataggata tgcctaaacc tctcattggc
6751 ccattctgga aacaaatcag tgtagaaatt ggttctgccg tctatcaagg
6801 gcaacagaat gatgtcaaca gatgataagt caggctttaa agactctagc
6851 ttaatggtat cttctttata cttttgctca aagtttattg gtgaagtcct
6901 gacaaagcat tccagtaata ttaatgtgtt cccactgaat ttgaatccat
6951 ctggcaccac aaatggtaga ccagggcaca gaacaccttg tctctgcaga
7001 aggatttcaa cagaaaggtc ttctgagttg tgctcacaac cattggcttt
7051 gcaactgtct atctcaatac agagtgacaa caacttaagg ccctcaatta
7101 atagcattct cggctctgtc tgaactagga aggctagctt ctgttttgaa
7151 agcctctcat cctctaagag gtacctgctc acaagatctt tgctctcgga
7201 cagcaactcc tccatcacca cacacttgtt cctcagaaga gagagtcaca
7251 atgcctagga tccactgtgc g