Sequence of DPV Mopeia virus
Mopeia virus AN20410 segment S, complete sequence.
ACC No: AY772170
Dated: 2004-11-15 | Length: 3427 | CRC: -1225349122
ID AY772170; SV 1; linear; genomic RNA; STD; VRL; 3427 BP.
XX
AC AY772170;
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DT 15-NOV-2004 (Rel. 81, Created)
DT 15-NOV-2004 (Rel. 81, Last updated, Version 1)
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DE Mopeia virus AN20410 segment S, complete sequence.
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KW .
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OS Mopeia virus AN20410
OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus;
OC Old world arenaviruses.
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RN [1]
RP 1-3427
RA Lukashevich I.S., Carrion R., Moshkoff D.A., Ticer A., Brasky K.,
RA Hubbard G.B., Patterson J., Bryant J., Salvato M.S.;
RT "Protective Activity of MOP/LAS Reassortant in Lassa Virus Challenge
RT Experiments";
RL Unpublished.
XX
RN [2]
RP 1-3427
RA Moshkoff D.A., Sadzewicz L., Salvato M.S., Pauza D.C., Lukashevich I.S.;
RT "The Complete Nucleotide Sequence of Mopeia Virus";
RL Unpublished.
XX
RN [3]
RP 1-3427
RA Moshkoff D.A., Lukashevich I.S., Salvato M.S., Sadzewicz L.;
RT ;
RL Submitted (06-OCT-2004) to the EMBL/GenBank/DDBJ databases.
RL Basic Science, Institute of Human Virology, UMBI, UMD, Room S517, 725 West
RL Lombard Street, Baltimore, MD 21201, USA
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FH Key Location/Qualifiers
FH
FT source 1. .3427
FT /organism="Mopeia virus AN20410"
FT /segment="S"
FT /strain="AN20410"
FT /mol_type="genomic RNA"
FT /country="Mozambique"
FT /db_xref="taxon:300175"
FT gene 54. .1523
FT /gene="GPC"
FT CDS 54. .1523
FT /codon_start=1
FT /gene="GPC"
FT /product="glycoprotein precursor"
FT /db_xref="GOA:Q5S582"
FT /db_xref="InterPro:IPR001535"
FT /db_xref="UniProtKB/TrEMBL:Q5S582"
FT /protein_id="AAV54108.1"
FT /translation="MGQIVTFFQEVPHILEEVMNIVLMTLSILAILKGIYNVMTCGIIG
FT LITFLFLCGRSCSSIYKDNYEFFSFDLDMSSLNATMPLSCSKNNSHHYIQVGNETGLEL
FT TLTNTSIIDHKFCNLSDAHRRNLYDKALMSILTTFHLSIPDFNQHEAMSCDFNGGKISV
FT QYNLSHSNYVDAGNHCGTIANGIMDVFRRMYWSTSLSVASDISGTQCIQTDYKYLIIQN
FT TSWEDHCMFSRPSPMGFLSLLSQRTRNFYISRRLLGLFTWTLSDSEGNDMPGGYCLTRS
FT MLIGLDLKCFGNTAIAKCNQAHDEEFCDMLRLFDFNKQAISKLRSEVQQSINLINKAVN
FT ALINDQLVMRNHLRDLMGIPYCNYSKFWYLNDTRTGRTSLPKCWLVTNGSYLNETQFST
FT EIEQEANNMFTDMLRKEYEKRQSTTPLGLVDLFVFSTSFYLISVFLHLIKIPTHRHIKG
FT KPCPKPHRLNHMAICSCGFYKQPGLPTQWKR"
FT gene complement(1647. .3359)
FT /gene="NP"
FT CDS complement(1647. .3359)
FT /codon_start=1
FT /gene="NP"
FT /product="nucleocapsid protein"
FT /db_xref="GOA:Q5S581"
FT /db_xref="InterPro:IPR000229"
FT /db_xref="UniProtKB/TrEMBL:Q5S581"
FT /protein_id="AAV54109.1"
FT /translation="MSNSKEVKSFLWTQSLRRELSGYCSNIKIQVIKDAQALLHGLDFS
FT EVANVQRLMRKEKRDDSDLKRLRDLNQAVNNLVELKSVQQKNVLRVGTLTSDDLLVLAA
FT DLDRLKAKVIRGERPLAAGVYMGNLTAQQLEQRRVLLQMVGMGGGFRAGNTLGDGIVRV
FT WDVRNPELLNNQFGTMPSLTIACMCKQGQADLNDVIQSLSDLGLVYTAKYPNMSDLDKL
FT SQTHPILGIIEPKKSAINISGYNFSLSAAVKAGACLIDGGNMLETIKVTKSNLEGILKA
FT ALKVKRSLGMFVSDTPGERNPYENLLYKLCLSGEGWPYIASRTSIVGRAWDNTTVDLSG
FT DVQQNAKPDKGNSNRLAQAQGMPAGLTYSQTMELKDSMLQLDPNAKTWIDIEGRPEDPV
FT EIAIYQPNNGQYIHFYREPTDIKQFKQDSKHSHGIDIQDLFSVQPGLTSAVIESLPKNM
FT VLSCQGADDIRKLLDSQNRRDIKLIDVSMQKDDARKFEDKIWDEYKHLCRMHTGIVTQK
FT KKRGGKEEVTPHCALLDCLMFEAAVIGSPQIPTPRPVLSRDLVFRTGPPRVVL"
XX
SQ Sequence 3427 BP; 876 A; 824 C; 737 G; 990 T; 0 other;
ay772170 Length: 3427 15-NOV-2004 Type: N Check: 9667 ..
1 cgcccttgtg gatcctaggc tttttggttg cgcatttcta gagcatctcg
51 gagatggggc agatagtcac cttctttcaa gaggtgccac acatccttga
101 agaagtgatg aacattgtgc tgatgaccct ctcaatcttg gccatcctaa
151 agggcatcta caatgtgatg acctgtggaa tcatcggttt gataacattt
201 ttgttcttgt gtgggagatc atgctcaagc atctataagg acaactatga
251 gttcttctct ttcgacctcg acatgtcttc actgaatgca acgatgcctc
301 tctcctgctc aaagaacaac tcccatcact acatccaagt tgggaatgag
351 acaggcctag agctgacatt gacaaacact agcataattg atcataagtt
401 ttgcaacctg tctgatgctc acaggaggaa tctttatgac aaagcactta
451 tgtcaatctt gacaacattc cacctaagca ttccagattt taaccaacat
501 gaggcaatgt catgtgattt taacggaggg aagatctcag ttcaatacaa
551 cctgtcccac tcaaattatg tggatgccgg caaccactgt ggcactattg
601 caaatggcat tatggatgtt tttagaagaa tgtattggag cacctccctt
651 tcggttgcct ctgacataag tgggactcaa tgcatacaga ccgattataa
701 gtatttgatt attcagaaca catcatggga ggatcattgc atgttctcaa
751 gaccctcacc catgggattt ttaagccttc tgtcacagag aaccaggaat
801 ttctacatct caagaagact tttgggtctt tttacatgga ctttgagtga
851 ctcggaaggg aacgacatgc caggtggtta ctgtctcaca aggtctatgc
901 taatagggct tgatctgaaa tgctttggga acactgccat tgcgaagtgt
951 aatcaggcac atgatgaaga attctgtgac atgctccgcc tttttgattt
1001 taataaacaa gcaattagca aactgaggtc tgaagttcag cagagcataa
1051 atttgataaa taaagctgtc aacgccctca tcaatgatca actggtcatg
1101 aggaaccatt tgagagatct aatgggtatt ccttattgca actactctaa
1151 gttttggtac ttgaatgata ctaggacagg gagaacatcc ctcccaaagt
1201 gttggcttgt gaccaatggg tcatacctaa atgaaaccca gttctcaaca
1251 gaaattgagc aagaagccaa taacatgttc actgacatgt tgaggaagga
1301 gtatgagaaa aggcagagca caacacctct ggggttagta gatctttttg
1351 ttttctccac tagcttttat ttgatctccg tgttcctcca cctaatcaaa
1401 attccaacac atagacacat aaaaggcaag ccttgcccga aaccacacag
1451 actcaatcac atggcaatct gttcctgtgg cttctataag caaccaggtc
1501 tccccacaca atggaaaagg tgaagaacag gggcaccccc gagacccacc
1551 gccttcggcg gtgggtctcg ggggcctgga gtgactgttc cttgatggcc
1601 tccacgaccc accgccagag gcggtgggtc gtggaggtgt cccttcttac
1651 aggacaactc tgggaggacc tgttctaaac accaggtctc tactcaagac
1701 tggtctgggg gttggaattt gtggactccc tatgactgct gcttcaaaca
1751 tgagacaatc cagcaatgca cagtgtggtg tcacttcttc tttgccacct
1801 ctcttcttct tttgcgttac aatccccgta tgcattctac aaaggtgttt
1851 gtattcatcc cagatcttat cctcaaattt tcttgcatcg tctttctgca
1901 tggacacatc aatcagtttt atgtccctcc tgttctggga gtcaagaagc
1951 tttctgatgt catcagcacc ttgacacgac aagaccatgt tctttggcag
2001 gctctcaatt acagcacttg tcaaccccgg ctgaactgag aataggtctt
2051 ggatgtcaat gccatgagag tgtttggagt cttgtttgaa ttgtttaatg
2101 tctgttggtt ccctgtaaaa atgaatatac tgaccattat taggttgata
2151 gatagctatc tccacggggt cttcaggtct cccttctatg tcaatccatg
2201 tcttagcatt tggatccaat tgcaacatgc tgtctttgag ttccattgtc
2251 tgagagtagg tcaaaccagc aggcatgcct tgggcctgag cgagtctgtt
2301 ggagttacct ttgtcaggct ttgcattctg ttgcacatca ccactcagat
2351 caacagttgt gttatcccaa gccctgccga cgatcgatgt tcttgatgct
2401 atgtaaggcc aaccctctcc agaaagacat agtttgtaga ggagattttc
2451 ataagggttc ctttcccctg gcgtgtcaga gacaaacatt cccaaagaac
2501 gcttgacttt caaggcagcc ttcaaaattc cttccaaatt ggattttgtt
2551 actttgatgg tctccagcat gtttccgccg tctattagac aagcaccagc
2601 tttcaccgca gctgacaggc taaaattgta ccctgatatg tttatggcac
2651 ttttcttggg ctcaatgatc cccaagattg ggtgggtctg agagagtttg
2701 tctaagtcag acatgtttgg atactttgca gtgtacacaa gccccaagtc
2751 tgacaacgat tggatcacat cattcagatc tgcctgccct tgtttgcaca
2801 tgcaagcaat cgtcaggctt ggcattgtcc caaactgatt gtttaaaagc
2851 tctgggtttc gaacatccca cactctaaca atgccatctc cgagagtgtt
2901 tcctgcccgg aacccgccac ccattccgac catctgtaac aaaaccctcc
2951 tctgttctag ctgctgagct gttaggttgc ccatatagac tccagcagca
3001 agaggcctct cacctctgat gacttttgct ttgagtctgt ccaggtcggc
3051 agcaaggacg aggaggtcat cagaggttag tgtccccact ctcaaaacat
3101 tcttctgttg gactgacttt aactcaacta gattgttcac tgcctggttt
3151 aggtccctca atcttttcag gtcagagtca tccctcttct cctttctcat
3201 caacctttga acattggcaa cttcagagaa gtccagccca tgaagaagtg
3251 cttgagcatc cttgatgact tggatcttta tgttggagca gtaccctgag
3301 agttctctcc tcaggctctg tgtccacaag aaggacttca cctcctttga
3351 attggacatt gttggaggct tttcggtgca gagctgattc caaaggcgca
3401 atcaattagc ctaggatcca ctgtgcg