Sequence of DPV Potato virus Y

Potato virus Y strain N helper component protein gene, partial cds.

ACC No: AY775290

Dated: 2004-11-07 | Length: 1371 | CRC: -2114947009

                !!NA_SEQUENCE 1.0
ID   AY775290   standard; genomic RNA; VRL; 1371 BP.
XX
AC   AY775290;
XX
SV   AY775290.1
XX
DT   07-NOV-2004 (Rel. 81, Created)
DT   07-NOV-2004 (Rel. 81, Last updated, Version 1)
XX
DE   Potato virus Y strain N helper component protein gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae;
OC   Potyvirus.
XX
RN   [1]
RP   1-1371
RA   Wu Y., Wang R., Yang D., Hao X.-A.;
RT   "Cloning and Sequence Analysis of the HC-pro Gene of Potato Virus Y N
RT   Strain and its Expression";
RL   Unpublished.
XX
RN   [2]
RP   1-1371
RA   Wu Y., Wang R., Yang D., Hao X.-A.;
RT   ;
RL   Submitted (09-OCT-2004) to the EMBL/GenBank/DDBJ databases.
RL   Plant Protection, Plant Pathology, NO.22, Xinong Road, Yangling, Shaanxi
RL   712100, P.R.China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1371
FT                   /country="China"
FT                   /db_xref="taxon:12216"
FT                   /mol_type="genomic RNA"
FT                   /organism="Potato virus Y"
FT                   /strain="N"
FT   CDS             <1. .1371
FT                   /codon_start=1
FT                   /note="HC protein; HC-pro"
FT                   /product="helper component protein"
FT                   /protein_id="AAV41838.1"
FT                   /translation="SNADNFWKGLDGNWARMRYPSDHTCVAGLPVENCGRIAALMAHSI
FT                   LPCYKITCPTCAQQYASLPVSDLFKLLQKHARDGLNRLGADKDRFMHVNKFLIALEHLT
FT                   EPVDLNLELFNEIFKSIREKQQAPFKNLNVLNNFFLKGKENTAHEWQVAQLSLLELARF
FT                   QKNRTDNIKKGDISFFRNKLSAKANWNLYLSCDNQLDKNANFLWGQREYHAKRFFSNFF
FT                   EEIDPAKGYSAYEIRKHPNGTRKLSIGNLIVPLDLAEFRQKMKGDYRRQPGVSRKCTSS
FT                   KDGNYVYPCCCTTHDDGSAIESTFYPPTKKHLVIGNSGDQKFVDLPKGDSEMLYIAKQG
FT                   YCYINAFLAMLINISEEGAKDFTKKVRDMCVPKLGTWPTMMDLATTCAQMRIFYPDVHD
FT                   AELPRILVDHDTQTCHVVDSFGSQTTGYHILKASSVSQLILFANDELESDIKHYRVG"
XX
SQ   Sequence 1371 BP; 427 A; 250 C; 316 G; 378 T; 0 other;

AY775290  Length: 1371  November 16, 2004 08:57  Type: N  Check: 7700  ..

       1  tcgaatgccg acaatttttg gaagggtctg gacggtaatt gggcacgaat
      51  gagatatcct tcggatcaca catgtgtagc tggtttacct gtcgagaatt
     101  gtggtaggat agctgcattg atggcacaca gtattctccc gtgctataag
     151  ataacctgcc ccacctgtgc tcaacagtat gccagcttgc cggttagcga
     201  tctgtttaag ctgttgcaaa aacatgcaag agatggtttg aaccgattgg
     251  gagcggataa agaccggttt atgcatgtta ataagttctt gatagcgtta
     301  gagcatctaa ctgaaccggt ggatttgaat ctcgagctct tcaatgagat
     351  attcaaatcc ataagggaaa agcagcaagc accgttcaag aacttaaatg
     401  tcttaaataa tttcttcctg aaaggaaaag aaaatacagc tcatgaatgg
     451  caggtggctc aattgagttt gctcgaatta gcaaggtttc agaagaacag
     501  aactgataac atcaagaaag gtgatatatc tttcttcaga aataaattat
     551  ctgccaaggc aaactggaat ctgtatttgt cgtgcgacaa ccagttggat
     601  aaaaatgcaa atttcctgtg gggacaaagg gagtatcatg ctaagcggtt
     651  tttctcaaac ttctttgagg aaattgatcc agcaaaggga tactcagcat
     701  atgaaatccg caagcatcca aatggaacaa ggaagctctc aattggtaac
     751  ttaattgtcc cacttgattt agctgagttt aggcagaaga tgaaaggtga
     801  ttataggagg caacctgggg tcagcagaaa gtgcacgagt tcgaaagatg
     851  gtaattatgt gtatccctgt tgttgcacaa cacatgacga tggttcagcc
     901  attgaatcaa cattctatcc gccaactaaa aagcaccttg taataggcaa
     951  tagtggtgac caaaaatttg ttgatttgcc aaaaggggat tcagagatgt
    1001  tatacattgc caagcagggt tattgttata ttaacgcgtt tcttgcaatg
    1051  ctgattaaca ttagcgagga gggtgcaaag gatttcacaa agaaagtccg
    1101  cgacatgtgt gtgccaaagc ttggaacctg gccaactatg atggatttgg
    1151  cgaccacttg tgctcaaatg agaatattct atcctgatgt gcatgatgca
    1201  gaacttccta gaatattggt cgaccatgac actcaaacgt gtcatgtggt
    1251  tgactccttt ggctcgcaga caactggata tcatattcta aaagcatcca
    1301  gcgtgtctca actcatcttg tttgcaaatg atgaattaga atctgatata
    1351  aaacattata gagttggtta a