Sequence of DPV Grapevine fanleaf virus
Grapevine fanleaf virus isolate A10a polyprotein P2 gene, complete cds.
ACC No: AY780902
Dated: 2005-10-06 | Length: 3333 | CRC: 840549447
!!NA_SEQUENCE 1.0
ID AY780902 standard; genomic RNA; VRL; 3333 BP.
XX
AC AY780902;
XX
SV AY780902.1
XX
DT 06-OCT-2005 (Rel. 85, Created)
DT 06-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE Grapevine fanleaf virus isolate A10a polyprotein P2 gene, complete cds.
XX
KW .
XX
OS Grapevine fanleaf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup A.
XX
RN [1]
RP 1-3333
RX PUBMED; 15968475.
RA Vigne E., Demangeat G., Komar V., Fuchs M.;
RT "Characterization of a naturally occurring recombinant isolate of Grapevine
RT fanleaf virus";
RL Arch. Virol. 150(11):2241-2255(2005).
XX
RN [2]
RP 1-3333
RA Vigne E., Fuchs M.;
RT ;
RL Submitted (14-OCT-2004) to the EMBL/GenBank/DDBJ databases.
RL UMR-VVA, INRA, 28 rue de Herrlisheim, Colmar, 68 68021, France
XX
FH Key Location/Qualifiers
FH
FT source 1. .3333
FT /country="France"
FT /db_xref="taxon:12274"
FT /mol_type="genomic RNA"
FT /organism="Grapevine fanleaf virus"
FT /isolate="A10a"
FT /segment="RNA2"
FT CDS 1. .3333
FT /codon_start=1
FT /product="polyprotein P2"
FT /protein_id="AAX18710.1"
FT /translation="MGKFYYSSRRLACWAAGKNPHLGGSVEQWLAAIETDPSFRQTVKE
FT DVQLNRMRPDAIRMFSWKVGFGPIDNPENCNWHFVLTGERPAQPTRPVKADEVVVVPQP
FT KKVVIPSPPSPPAPYFRAVGAFAPTRSGFIRATVERLTQEREESRAAALFAELPLEYPQ
FT GAPSKLSLAMKFAMLKHTTWRKWYDTSDERLLEAHPGGPCLLPPPPIQSPPSFRERVRE
FT FCRARSCARAFALETSLGLNRAWVGSIDIPSTSVCCADGRTTGGQTIAQEADPLQHRVS
FT TSVAPGRAQWISERRQALRRREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLL
FT PPLRSAYAPRGLWRGPSTRANYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMS
FT AVVIDALEIAINPFGMPGNPTDLTVVATYGHERDVTRAFIGSASTFLGNGLARAIFFPG
FT LQYSQEEPRRESIIRLYVASTNATVDTDSVLAAISVGTLRQHVGSMHYRTVANTVHQAQ
FT VQGTTLRATMMGNTVVVSPEGSLVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFS
FT IRSRSRSVRIDRNVDLPQLEAEPRLSSTVRGLAGRGVVYIPKDCQANRYLGTLNIRDMI
FT SDFKGVQYEKWITAGLVMPTFKIVVRLPANAFTGLTWVVSFDAYNRITSRITASADPIY
FT TLSVPHWLIHHKLGTFTCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQ
FT AVVELYAELEEATAFLGKPTLVFDPGVFNGKFQFLTCPPIFFDLTAVTALKSAGLTLGQ
FT VPMVGTTKVYNLNSTLVSCVLGMGGTIRGKVHICAPIFYSIVLWVVSEWNGTTMDWNEL
FT FKYPGVYVEEDGSFEVKIRSPYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPSGETARL
FT PIVVQIDEIVRPDLSLPSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSNTCRVSMGE
FT NPFAAMIACHGLHSGVLDLKLQWSLNTEFGKSSGSVTITKLAGDKAMGLDGPSQVFAIQ
FT KLEGVTDLLIGNFAGANPNTHVSLYSRWMAIKLDQAKSIKILRVLCKPRPGFSFYGRTS
FT FPV"
FT mat_peptide 1. .774
FT /note="putative homing protein"
FT /product="2A"
FT mat_peptide 775. .1818
FT /note="movement protein"
FT /product="2B"
FT mat_peptide 1819. .3330
FT /note="coat protein"
FT /product="2C"
XX
SQ Sequence 3333 BP; 817 A; 744 C; 887 G; 885 T; 0 other;
AY780902 Length: 3333 October 11, 2005 08:39 Type: N Check: 1716 ..
1 atgggcaagt tttattactc cagcaggcgt cttgcctgct gggctgctgg
51 taagaacccc catcttgggg gttctgttga acaatggctg gcggccattg
101 aaactgaccc ctccttccgc caaactgtca aggaggatgt ccagttgaac
151 cggatgcgcc cagatgccat ccggatgttc tcctggaaag ttgggttcgg
201 gcccatagac aatcccgaaa attgcaactg gcacttcgtc ttaacaggcg
251 aaaggccagc gcagccgacc cggccggtta aagccgatga ggttgtggtg
301 gtgccacaac cgaagaaagt ggtgattcca tcaccacctt ctcccccagc
351 tccctatttt agggctgttg gggcttttgc accaacccgg tccgggttta
401 tacgggccac tgtggaaaga ctcacccagg aacgggaaga gtcgagagct
451 gcggcactct ttgccgaact accattggag taccctcagg gtgctccttc
501 gaagttgagc ttggcgatga agttcgccat gctcaagcat accacttgga
551 ggaagtggta tgacactagt gatgagcgcc tcttggaggc ccatcctggt
601 ggaccctgcc ttctcccccc tcccccaatc caaagtcctc cctcttttcg
651 ggagagggta agggagtttt gcagggcaag gtcctgcgcc agggcttttg
701 ccttggaaac ctccctaggc cttaataggg cctgggtagg ttcaatagac
751 atccccagta cttctgtgtg ctgtgcggat gggagaacta ccggtgggca
801 aacgattgct caagaagctg atcccttgca acatagggtc agtacgtcag
851 tggctcccgg tagggctcaa tggatctctg agcgcagaca ggctctgcga
901 aggagagagc aggcaaatag cttgcagggt cttgctgctc aaacagacat
951 gacatttgag caggccagga atgcttatct tggtgctgcc gacatgattg
1001 agcaaggtct accactgctt ccccctctac gcagtgcata tgcccctagg
1051 ggcttgtgga ggggaccttc cactagagcc aattacacat tggatttcag
1101 gctcaatggt ataccgaccg ggacaaacac attagaaatt ctgtataacc
1151 ccgtgtcaga agaagagatg gaagagtacc gggatagggg tatgtcggct
1201 gtggtgattg atgcgctaga aatagccata aaccctttcg gcatgcctgg
1251 aaatccaacg gacctgaccg tcgtagcaac gtatgggcat gaacgtgatg
1301 tgacacgcgc ctttattgga tctgcttcca cattcttagg gaatgggtta
1351 gctagagcca ttttcttccc tggtttgcaa tatagtcagg aagaaccaag
1401 gcgtgaatct ataattcgcc tatatgttgc ttctactaat gccactgtgg
1451 acactgattc ggtcttggcg gccattagtg ttggcacttt acgtcaacat
1501 gttggttcca tgcactatcg gacagtggct aatactgtgc accaggccca
1551 ggtgcaaggt acgacactca gggctactat gatgggtaat actgttgtag
1601 tgtcacctga aggaagttta gtaactggaa cccctgaagc aagagttgaa
1651 atagggggcg gttctagtat taggatggtg gggcctctgc aatgggaaag
1701 tgtggaggaa ccagggcaga ccttctctat caggagtcga tcacgatcag
1751 tgaggattga cagaaatgtt gatcttcctc aacttgaggc cgagcccaga
1801 ctgagctcga ccgtgagagg attggctggt agaggagttg tttacattcc
1851 caaggattgc caggcaaata gatacttggg caccctgaac atacgagata
1901 tgatttcaga ttttaagggc gtccagtatg aaaaatggat aactgcagga
1951 ctagtcatgc ctacttttaa gatagttgtt aggctacctg caaatgcttt
2001 tactggattg acgtgggtag tgagctttga tgcttataat cggattacta
2051 gcagaattac tgctagtgca gatcccatat acaccttgtc ggttccacat
2101 tggcttatcc atcataagtt gggcacgttt acgtgtgaga tagactatgg
2151 agaattgtgt ggccacgcca tgtggtttaa gtccactacg tttgagtctc
2201 caaggttaca tttcacgtgt ttaacgggca acaataaaga gttggcggca
2251 gactggcaag ctgtcgtgga actatatgct gagttggaag aggccaccgc
2301 ttttcttggg aaaccaactt tggtttttga cccaggtgtt ttcaatggca
2351 aatttcaatt tttaacttgc cctcccatat tctttgatct aacagctgtc
2401 acagctctta agagtgctgg gctaacattg ggacaggtcc caatggttgg
2451 caccactaag gtttacaatc taaacagcac tcttgtgagt tgtgtgttag
2501 gtatgggagg tactattaga ggaaaggtac atatttgtgc gccaatcttc
2551 tatagtattg ttttatgggt agttagcgag tggaacggga ccactatgga
2601 ctggaatgaa cttttcaagt atcccggggt gtatgtggaa gaagacggaa
2651 gctttgaagt caaaattcgc tctccatatc accggacgcc tgctagattg
2701 cttgccggcc aaagccagag ggacatgagc tctctaaatt tttatgcaat
2751 agcaggacct atcgctccgt cgggtgagac cgcacgactt cccattgttg
2801 tacaaattga tgagatcgtg cgcccagacc tttctttgcc aagttttgaa
2851 gatgattatt ttgtatgggt ggatttttcc gagttcactc ttgacaaaga
2901 agaaattgag attggttctc gtttctttga tttcacttca aatacttgca
2951 gagtttctat gggagaaaac ccgtttgctg caatgattgc ctgtcatgga
3001 ctacatagtg gtgtgttaga cctcaaactc cagtggagtt tgaacaccga
3051 attcggcaag agcagtggga gtgttactat tacgaagctg gctggtgata
3101 aggccatggg tttggatggg ccttcacaag tttttgccat acagaaacta
3151 gagggggtaa cagacttgtt gattgggaat tttgcgggtg caaacccaaa
3201 tacccatgtc tccctttata gtcgctggat ggcaattaaa ctggatcaag
3251 caaagagtat taaaatactc cgtgttttgt gcaagcctcg cccgggtttt
3301 agcttttatg gaagaaccag cttcccagtc tag