Sequence of DPV Grapevine fanleaf virus
Grapevine fanleaf virus isolate B19a polyprotein P2 gene, complete cds.
ACC No: AY780903
Dated: 2005-10-06 | Length: 3333 | CRC: 2071968363
!!NA_SEQUENCE 1.0
ID AY780903 standard; genomic RNA; VRL; 3333 BP.
XX
AC AY780903;
XX
SV AY780903.1
XX
DT 06-OCT-2005 (Rel. 85, Created)
DT 06-OCT-2005 (Rel. 85, Last updated, Version 1)
XX
DE Grapevine fanleaf virus isolate B19a polyprotein P2 gene, complete cds.
XX
KW .
XX
OS Grapevine fanleaf virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC Nepovirus; Subgroup A.
XX
RN [1]
RP 1-3333
RX PUBMED; 15968475.
RA Vigne E., Demangeat G., Komar V., Fuchs M.;
RT "Characterization of a naturally occurring recombinant isolate of Grapevine
RT fanleaf virus";
RL Arch. Virol. 150(11):2241-2255(2005).
XX
RN [2]
RP 1-3333
RA Vigne E., Fuchs M.;
RT ;
RL Submitted (14-OCT-2004) to the EMBL/GenBank/DDBJ databases.
RL UMR-VVA, INRA, 28 rue de Herrlisheim, Colmar, 68 68021, France
XX
FH Key Location/Qualifiers
FH
FT source 1. .3333
FT /country="France"
FT /db_xref="taxon:12274"
FT /mol_type="genomic RNA"
FT /organism="Grapevine fanleaf virus"
FT /isolate="B19a"
FT /segment="RNA2"
FT CDS 1. .3333
FT /codon_start=1
FT /product="polyprotein P2"
FT /protein_id="AAX18711.1"
FT /translation="MGKFYYSSRRLACWAAGKNPHLGGSVEQWLAAIETDPSFRQTVKE
FT DVQLNRERLDAIRMFSWKVGSGPIDNPEKCDWHFVLTGERPAQPIRPVKADEVVVVPQP
FT KKVVIPPPPSPPAPYFRAVGAFAPTRSGFVRATVERLTREREESRAAALFAELPLEYPQ
FT GAPLKLSLAMKFAMLKHTTWRKWYDTSDERLLEAHPGGPCLLPPPPIQSPPSFQERVRE
FT FCRARSCARAFAWETSLGLNRAWVGSIDIPSTSVCCADGRTTGGQTIAQEADPLQHRIS
FT TSVAPGRAQWISERRQALRRREQANSLQGLAAQTDMTFEQARNAYLGAADMIEQGLPLL
FT PPLRSAYAPRGLWRGPSTRANYTLDFRLNGIPTGTNTLEILYNPVSEEEMEEYRDRGMS
FT AVVIDALEIAINPFGMPGNPTDLTVVATYGHERDMTRAFIGSASTFLGNGLARAIFFPG
FT LQYSQEEPRRESIIRLYVASTNATVDTDSVLAAISVGTLRQHVGSMHYRTVASTVHQAQ
FT VQGTTLRAAMMGNTVVVSPEGSLVTGTPEARVEIGGGSSIRMVGPLQWESVEEPGQTFS
FT IRSRSRSMRVDRNVDLPQLEAEPRLSSTVRGLAGRGVIYIPKDCQANRYLGTLNIRDMI
FT ADFKGVQYEKWITAGLVMPIFKIVVRLPANAFTGLTWVMSFDAYNRITSRITVSADPVY
FT TLSVPHWLIHHKLGTFSCEIDYGELCGHAMWFKSTTFESPRLHFTCLTGNNKELAADWQ
FT AVVELYAELEEAASFLGKPTLVFDPGVFDGKFQFLTCPPIFFDLTAVTALRSAGLTLGQ
FT VPMVGTTKAYNLNSTLVSCVLGMGGTIRGRVHICAPIFYSIVLWVVSEWNGTTMDWNEL
FT FKYPGVYMEEDGSFEVKIRSPYHRTPARLLAGQSQRDMSSLNFYAIAGPIAPSGETARL
FT PIVIQIDEIVRPDLALPSFEDDYFVWVDFSEFTLDKEEIEIGSRFFDFTSSTCRVSMGG
FT NPFAAMIACHGLHSGVLDLKFQWSLNTEFGKSSGSVTVTKLVGDKATGLDGSSQVFAIQ
FT KLEGVTELLIGNFAGANPNTHFSLYSRWMAIKLDQAKSIKVLRVLCKPRPGFSFYGRTS
FT FPV"
FT mat_peptide 1. .774
FT /note="putative homing protein"
FT /product="2A"
FT mat_peptide 775. .1818
FT /note="movement protein"
FT /product="2B"
FT mat_peptide 1819. .3330
FT /note="coat protein"
FT /product="2C"
XX
SQ Sequence 3333 BP; 819 A; 747 C; 882 G; 885 T; 0 other;
AY780903 Length: 3333 October 11, 2005 08:39 Type: N Check: 9023 ..
1 atgggcaagt tttattactc cagcaggcgt cttgcctgct gggctgctgg
51 taagaacccc catcttgggg gttctgttga acaatggctg gcggccattg
101 aaactgatcc ctccttccgc caaactgtta aggaggatgt ccagttgaac
151 cgggagcgcc tagacgctat ccgaatgttc tcctggaaag ttgggtccgg
201 gcccattgac aatcccgaaa agtgcgactg gcacttcgtc ttaacaggcg
251 aaaggccagc gcagccgatc cggccggtta aagctgatga ggttgtggtg
301 gtgccacaac cgaagaaagt ggtgattcca ccaccacctt ctcccccagc
351 tccctatttt agggctgttg gggcttttgc accaacccgg tccgggtttg
401 tccgggccac tgtggaaaga ctcacccggg aacgggaaga gtcgagagct
451 gcggcactct ttgccgaact accattggag taccctcagg gtgctccttt
501 gaagttgagc ttggcgatga agttcgccat gctcaagcat accacttgga
551 ggaagtggta tgacactagt gatgagcgcc tcttggaggc ccatcctggt
601 ggaccctgcc ttcttccccc tcccccaatc caaagtcctc cctcttttca
651 ggagagggta agggagtttt gcagggcaag gtcctgcgcc agggcttttg
701 cctgggaaac ctccctaggt cttaataggg cctgggtagg ttcaatagac
751 atccccagta cttctgtgtg ctgtgcggat gggagaacta ccggtgggca
801 aacgattgct caagaagctg atcccttgca acataggatc agcacatctg
851 tagcccccgg tagggctcaa tggatctccg aacgcagaca ggctctgcga
901 aggagagagc aagcaaatag cttgcagggt cttgctgctc aaacggatat
951 gacatttgag caggccagga acgcatatct tggtgctgcc gatatgattg
1001 agcaaggcct accactgctt ccccccctgc gcagcgcgta tgcccccagg
1051 ggtttgtgga ggggaccctc taccagagcc aattacacgt tagactttag
1101 gctcaatggt ataccgaccg ggacgaatac gttagaaatt ttgtacaatc
1151 ccgtgtctga agaagagatg gaagagtacc gggatagagg tatgtcagct
1201 gtggtgattg atgctttaga aatagcaata aacccatttg gcatgcctgg
1251 aaatccaacg gacttaactg tcgtagcaac gtatgggcat gagcgcgata
1301 tgacacgtgc ctttattgga tctgcttcca cattcttggg gaatgggtta
1351 gctagagcca ttttctttcc tggtttgcaa tatagccagg aagagccaag
1401 gcgcgaatct ataatccgcc tatatgttgc ttctactaac gccactgtag
1451 acaccgactc agttttagca gccattagtg tcggcactct gcgtcaacac
1501 gttggctcta tgcattatcg gacggtggct agtaccgtgc accaggccca
1551 ggtgcaaggc actacactca gggctgctat gatgggtaac actgttgtag
1601 tatcacctga aggaagccta gttacaggaa cccctgaagc gagagttgaa
1651 atagggggtg gttctagtat taggatggtg ggacctctac aatgggaaag
1701 tgtggaggaa ccagggcaaa ctttctctat cagaagccgt tcacgatcta
1751 tgagggttga tagaaatgtt gatcttcctc aacttgaggc tgagcccagg
1801 ttgagctcga ccgtgagagg attagctggt agaggagtga tttatattcc
1851 caaagattgc caggcaaaca gatacttggg caccctgaat atacgagaca
1901 tgattgcaga ttttaagggt gttcagtatg agaagtggat aactgcaggg
1951 ttggttatgc ctatctttaa gatagttgtt aggttacctg caaatgcctt
2001 taccggattg acatgggtga tgagctttga tgcttacaac cggataacta
2051 gcagaattac tgttagtgca gatccagtat atactctatc agtcccccat
2101 tggcttatcc accacaagtt aggcacgttc tcatgtgaga tagactatgg
2151 agaattgtgt ggtcacgcaa tgtggtttaa atccaccacg ttcgaatctc
2201 caaggctaca ttttacgtgc ttaactggta ataataaaga gctggcggca
2251 gactggcaag ctgttgttga gctctatgcg gaattggaag aagccgcttc
2301 ttttcttgga aaacccaccc tagtcttcga cccgggtgtt tttgatggta
2351 aattccaatt cttgacttgc cctcccatat tctttgatct aacagccgtc
2401 acggctctta gaagtgctgg gctgacgttg gggcaggtcc cgatggttgg
2451 caccactaag gcttataacc taaacagcac tcttgtgagt tgtgttttgg
2501 gtatgggagg tactattaga ggaagggtgc acatttgtgc tccaattttc
2551 tatagtattg ttttatgggt tgttagtgag tggaacggga ccactatgga
2601 ctggaatgaa ctctttaagt atcccggggt gtatatggaa gaggatggaa
2651 gctttgaagt taaaatccgc tctccatatc accgaacgcc tgctagattg
2701 cttgctggtc aaagccagag agacatgagc tctttaaatt tttatgcaat
2751 agcaggacct atcgctcctt caggtgaaac cgcgcgactt cccattgtca
2801 tacaaattga tgagatcgtg cgcccggacc tggctctacc gagttttgaa
2851 gatgattatt ttgtgtgggt ggatttttca gaattcactc ttgacaagga
2901 agaaattgaa attggttctc gtttcttcga cttcacttca agtacttgta
2951 gagtctctat ggggggaaac ccatttgctg caatgattgc ctgccatgga
3001 ttgcatagtg gtgtattaga cctcaaattt cagtggagtc tgaacaccga
3051 atttggcaag agcagcggga gcgttactgt tacgaagttg gttggtgaca
3101 aagccactgg cctggatgga tcttcgcaag tttttgccat acaaaaatta
3151 gagggagtaa cagaattgtt gattgggaat tttgcaggag caaacccaaa
3201 cactcatttc tctctctata gtcgatggat ggcaattaaa ctggatcaag
3251 caaagagtat taaagtactc cgtgttttgt gcaagcctcg tccaggtttc
3301 agtttttatg gaagaaccag cttcccagtc tag