Sequence of DPV Tobacco ringspot virus

Tobacco ringspot virus coat protein gene, partial cds.

ACC No: AY787756

Dated: 2004-12-01 | Length: 1548 | CRC: 1296205051

                !!NA_SEQUENCE 1.0
ID   AY787756   standard; genomic RNA; VRL; 1548 BP.
XX
AC   AY787756;
XX
SV   AY787756.1
XX
DT   01-DEC-2004 (Rel. 82, Created)
DT   01-DEC-2004 (Rel. 82, Last updated, Version 1)
XX
DE   Tobacco ringspot virus coat protein gene, partial cds.
XX
KW   .
XX
OS   Tobacco ringspot virus
OC   Viruses; ssRNA positive-strand viruses, no DNA stage; Comoviridae;
OC   Nepovirus; Subgroup A.
XX
RN   [1]
RP   1-1548
RA   Zhu C., Wen F.;
RT   ;
RL   Submitted (20-OCT-2004) to the EMBL/GenBank/DDBJ databases.
RL   College of Life and Sciences, Shandong Agricultural University, 61 Daidong
RL   Street, Taian, Shandong 271018, China
XX
FH   Key             Location/Qualifiers
FH
FT   source          1. .1548
FT                   /country="China"
FT                   /db_xref="taxon:12282"
FT                   /mol_type="genomic RNA"
FT                   /organism="Tobacco ringspot virus"
FT                   /isolate="SD1"
FT                   /specific_host="tobacco"
FT   CDS             <1. .1548
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /protein_id="AAV70510.1"
FT                   /translation="MCAVTVVPDPTCCGTLSFKVPKDAKKGKHLGTFDIRQAIMDYGGL
FT                   HSQEWCAKGIVNPTFTVRMHAPRNAFAGLSIACTFDDYKRIDLPALGNECPPSEMFELP
FT                   TKVFMLKDADVHEWQFNYGELTGHGLCNWANVVTQPTLYFFVASTNQVTMAADWQCIVT
FT                   MHVDMGPVIDRFELDPTMTWPIQLGDTFAIDRYYEAKEIKLDGSTSMLSISYNFGGPVK
FT                   HSKKHAISYSRAVMSRNLGWSGTISGSVKSVSSLFCTASFVIFPWEHETPPTLRQVLWG
FT                   PHQIMHGDGQFEIATKTRLHSSSTTEEGFGRLGILPLSGPIAPDAHVGSYEFIVHIDTW
FT                   RPDSQVHPPMFSSAELYNWFTLTNLKPDANTGVVNFDIPGYIHDFASKDATVTLASNPL
FT                   SWLVAATGWHYGEVDLCISWSRSKQAQAQEGSVSITTNYRDWGAYWQGQARIYDLRRTE
FT                   AEIPIFLGSYAGATPSGALGKQNYVRISIVNAKDIVALRVCLRPKSIKFWGRSATLF"
XX
SQ   Sequence 1548 BP; 362 A; 334 C; 375 G; 477 T; 0 other;

AY787756  Length: 1548  December 7, 2004 09:08  Type: N  Check: 848  ..

       1  atgtgtgctg tgacagttgt tcctgatccc acttgttgtg ggacattgtc
      51  ctttaaagtt cccaaagatg caaagaaagg aaagcatctt ggaacctttg
     101  acattcggca agccattatg gattatggtg gtttgcattc ccaagaatgg
     151  tgtgcaaagg gcattgttaa tcccaccttt acagtgagga tgcatgcccc
     201  acgcaacgcc tttgcaggtt tgtctatagc gtgcaccttt gatgattata
     251  aacgcataga cttaccagcg cttgggaatg aatgtcctcc ctctgagatg
     301  tttgagctgc ctaccaaggt tttcatgctt aaagatgcag atgtgcatga
     351  gtggcagttc aactatgggg aacttacagg acatgggttg tgcaattggg
     401  caaatgtagt tacccagccc acattgtact tttttgttgc atccacaaat
     451  caggtgacga tggctgctga ttggcagtgt attgttacta tgcatgtgga
     501  catggggccc gtcattgatc gatttgagtt agatccaact atgacgtggc
     551  ccattcaatt gggtgacact ttcgccattg atagatatta tgaggcgaaa
     601  gaaataaagc ttgatgggtc gacctccatg ttgtccatat cttataattt
     651  cggaggccct gttaagcatt ctaagaagca tgccatttca tattctcggg
     701  cagttatgtc caggaatctt ggatggtctg gcactataag cggaagtgtc
     751  aagagtgttt cttctttatt ttgtaccgct tcctttgtta ttttcccatg
     801  ggaacatgaa acacctccga ctttgcgtca ggtgttgtgg ggcccacatc
     851  agataatgca cggagatggc cagtttgaaa ttgctaccaa gacccgtctt
     901  cattcatctt ctacaactga agaaggattt ggtagacttg gcattctccc
     951  tctttctggt cccatagctc ctgatgcaca tgttgggtcg tacgagttta
    1001  ttgtacatat agatacctgg cgacccgact ctcaggtgca tcctcccatg
    1051  ttttctagtg cggagcttta taattggttt actttaacca atttgaaacc
    1101  ggatgcgaac actggcgtgg tcaattttga tatccctgga tacattcatg
    1151  acttcgcctc taaagacgca actgtgacgc tcgcatcgaa tcccctttct
    1201  tggcttgttg cagccactgg ctggcattat ggtgaggtgg atctctgcat
    1251  ttcttggtca aggtctaaac aggcccaggc tcaggagggc agtgtttcca
    1301  tcaccaccaa ttatagagat tggggtgctt attggcaagg ccaggctcgg
    1351  atttatgatt tgcggcgcac cgaggcggaa atccccattt tcttgggttc
    1401  ttatgctggt gcgacgccat ctggtgcttt gggtaagcaa aactatgttc
    1451  gaatttcaat tgtcaatgct aaggatatag ttgcattgcg agtgtgtttg
    1501  cgacccaaat ctataaagtt ctggggtcgc tctgccactt tgttttaa