Sequence of DPV Alternanthera mosaic virus
Alternanthera mosaic virus AltMV-BR triple gene block 2 protein (TGB2), triple gene block 3 protein (TGB3), and coat protein (CP) genes, complete cds.
ACC No: AY850928
Dated: 2007-03-11 | Length: 1295 | CRC: 1165531206
ID AY850928; SV 1; linear; genomic RNA; STD; VRL; 1295 BP.
XX
AC AY850928;
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DT 19-APR-2005 (Rel. 83, Created)
DT 11-MAR-2007 (Rel. 91, Last updated, Version 4)
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DE Alternanthera mosaic virus AltMV-BR triple gene block 2 protein (TGB2),
DE triple gene block 3 protein (TGB3), and coat protein (CP) genes, complete
DE cds.
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KW .
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OS Alternanthera mosaic virus
OC Viruses; ssRNA positive-strand viruses, no DNA stage; Flexiviridae;
OC Potexvirus.
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RN [1]
RP 1-1295
RA Hammond J., Reinsel M.D., Maroon-Lango C.J.;
RT "Identification of potexvirus isolates from creeping phlox and trailing
RT portulaca as strains of Alternanthera mosaic virus, and comparison of the
RT 3-terminal portion of the viral genomes";
RL Acta Hortic. 722:71-77(2006).
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RN [2]
RP 1-1295
RX DOI; 10.1007/s00705-005-0646-2.
RX PUBMED; 16211329.
RA Hammond J., Reinsel M.D., Maroon-Lango C.J.;
RT "Identification and full sequence of an isolate of Alternanthera mosaic
RT potexvirus infecting Phlox stolonifera";
RL Arch. Virol. 151(3):477-493(2006).
XX
RN [3]
RP 1-1295
RA Hammond J., Reinsel M.D., Maroon-Lango C.J.;
RT ;
RL Submitted (09-DEC-2004) to the EMBL/GenBank/DDBJ databases.
RL Floral and Nursery Plants Research Unit, United States National Arboretum,
RL USDA-ARS, 10300 Baltimore Avenue, Beltsville, MD 20705, USA
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FH Key Location/Qualifiers
FH
FT source 1. .1295
FT /organism="Alternanthera mosaic virus"
FT /specific_host="Phlox stolonifera cv. Blue Ridge"
FT /isolate="AltMV-BR"
FT /mol_type="genomic RNA"
FT /country="USA:Maryland"
FT /virion
FT /db_xref="taxon:85454"
FT gene 44. .376
FT /gene="TGB2"
FT CDS 44. .376
FT /codon_start=1
FT /gene="TGB2"
FT /product="triple gene block 2 protein"
FT /note="12 kDa protein"
FT /db_xref="InterPro:IPR001896"
FT /db_xref="UniProtKB/TrEMBL:Q52Z63"
FT /protein_id="AAX86013.1"
FT /translation="MSGLPHSLTPPADYSKPVLAAAVGVSLALVINSFLVYRLPSPGDN
FT IHQLPFGGSYRDGTKSIHYNSPRAQSQISGASPFLIILILSALIYALSCRGGHHRARLH
FT RCPCCS"
FT variation 56
FT /gene="TGB2"
FT /replace="t"
FT /note="Pro->Ser"
FT gene 312. .503
FT /gene="TGB3"
FT CDS 312. .503
FT /codon_start=1
FT /gene="TGB3"
FT /product="triple gene block 3 protein"
FT /note="7 kDa protein"
FT /db_xref="InterPro:IPR003411"
FT /db_xref="UniProtKB/TrEMBL:Q52Z62"
FT /protein_id="AAX86014.1"
FT /translation="MPYLVEAAITVLACIGVLAALRPGSHPCTILLTGHSATISGNCGP
FT VAPETIRALGDYLTGLRF"
FT variation 356
FT /replace="g"
FT /note="Gly->Arg in TGB2; Ile->Met in TGB3"
FT gene 546. .1169
FT /gene="CP"
FT CDS 546. .1169
FT /codon_start=1
FT /gene="CP"
FT /product="coat protein"
FT /db_xref="GOA:Q52Z61"
FT /db_xref="InterPro:IPR000052"
FT /db_xref="UniProtKB/TrEMBL:Q52Z61"
FT /protein_id="AAX86015.1"
FT /translation="MSTPFPQVTQEQMNAFTPHTTSNLLPSPEQLTTIANLLVAAKVPA
FT ASTTTIALELVNFCYDNGSSTYTAVVGPSSLAEVSLSQVANIVKASGTSLRKFCRFFAP
FT IIWNLRTDKTPPANWEANGFKPTEKFAAFDFFDGVENPAAMQPPGGLVRTPSQAERIAN
FT ATNKQVNLFQAAAQDNNFASNSAFITKGQLSSNSPTIQYLPPPE"
FT 3'UTR 1170. .1295
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SQ Sequence 1295 BP; 300 A; 405 C; 266 G; 324 T; 0 other;
ay850928 Length: 1295 11-MAR-2007 Type: N Check: 8843 ..
1 cacgctctgt acatcgctct cacccgccac aagaagtctc tccatgtccg
51 ggctccccca ctccctgaca ccccccgccg attactctaa gccagtgctt
101 gcagcagcag taggagttag tttagcttta gtaataaact ctttcttggt
151 ctataggctt ccctcgcccg gggacaatat tcatcaactg ccctttggag
201 gttcctaccg ggacggaact aagagcatcc actacaattc gcctagggcc
251 cagagtcaga tctcaggtgc gtcaccgttc ctgataatcc tgatactctc
301 agccctcatc tatgccctat cttgtagagg cggccatcac cgtgctcgct
351 tgcataggtg tccttgctgc tcttaggcca gggtcccatc cttgcaccat
401 tctgctaact ggacactctg cgaccattag cggaaactgt ggacctgtcg
451 caccagagac catcagggct cttggagact acttaaccgg gcttaggttt
501 tagcattagt ttgattatcc tattgtcatc ctagttgaag tcatcatgtc
551 tacaccattt cctcaagtta ctcaggaaca gatgaacgcc ttcactccac
601 ataccacatc caatctcctt ccatcaccgg agcagttgac caccattgcc
651 aacctcttgg ttgctgccaa ggtgcctgcc gcctcaacca cgaccatcgc
701 cctggagctt gttaacttct gttatgacaa tggctccagt acctacacag
751 cggtggtggg cccttcttca cttgcagagg tctcactctc ccaggtcgct
801 aacatcgtca aagcctcagg cacctctctc cgcaaattct gcagattctt
851 tgctccaatc atctggaacc tcagaacaga caagacgccc ccagccaact
901 gggaagccaa tgggttcaaa ccgacagaga agtttgcagc cttcgatttc
951 ttcgatggag tggagaatcc ggcggccatg cagccaccag gagggttggt
1001 taggactccc agccaagcag aaaggatcgc caacgccact aacaagcagg
1051 taaacctctt tcaggccgcg gcacaggata ataacttcgc cagcaactct
1101 gcattcatca ccaagggcca attgtcctcc aactcaccaa ccattcaata
1151 cctcccacca cctgagtgat ttctccaccc agtccaagcc cgttgttttc
1201 gcaattttgt tggggctatc gagttttcaa aattgcttcc gcttctgtag
1251 acctaaatta cagcctagtg tgcggtttaa tacctattta cgcac